Alphaherpesvirinae and Gammaherpesvirinae glycoprotein L and CMV UL130 originate from chemokines
Open accessAbstract
Herpesviridae is a large family of DNA viruses divided into three subfamilies: Alpha-, Beta- and Gammaherpesvirinae. The process of herpesvirus transmission is mediated by a range of proteins, one of which is glycoprotein L (gL). Based on our analysis of the solved structures of HSV2 and EBV gH/gL complexes, we propose that Alphaherpesvirinae and Gammaherpesvirinae glycoprotein L and Betaherpesvirinae UL130 originate from chemokines. Herpes simplex virus type 2 gL and human cytomegalovirus homolog (UL130) adopt a novel C chemokine-like fold, while Epstein-Barr virus gL mimics a CC chemokine structure. Hence, it is possible that gL interface with specific chemokine receptors during the transmission of Herpesviridae. We conclude that the further understanding of the function of viral chemokine-like proteins in Herpesviridae infection may lead to development of novel prophylactic and therapeutic treatment.
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Viral infection facilitates neurodegenerative disease development, such as Alzheimer's disease, Multiple Sclerosis and Parkinson's Disease.
“These evidences indicate that viral infection facilitates neurodegenerative disease development, as Alzheimer’s disease, Multiple Sclerosis and Parkinson’s Disease [140].”
From Hyperactivation of P2X7 receptors as a culprit of COVID-19 neuropathology (2021) · cites this paper as [140]
Experimental evidence supports that viral infection may evoke neuronal death, encephalopathy, myelin destruction and juvenile Parkinson's disease development; however, these studies did not include coronaviruses.
“Experimental evidence supports that viral infection may evoke neuronal death, encephalopathy, myelin destruction and juvenile Parkinson’s disease development; however, these studies did not include coronaviruses [140].”
From Hyperactivation of P2X7 receptors as a culprit of COVID-19 neuropathology (2021) · cites this paper as [140]
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Cites
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302 · see citing works
Hall, T. A. (1999) · Nucleic Acids Symposium Series · doi:10.14601/phytopathol_mediterr-14998u1.29 · Cited by 38,373 · see citing works
The PyMOL Molecular Graphics System
DeLano, W. L. (2002) · Medical Entomology and Zoology · Cited by 18,147 · see citing works
Comparative Protein Modelling by Satisfaction of Spatial Restraints
Šali, A., & Blundell, T. L. (1993) · Journal of Molecular Biology · doi:10.1006/jmbi.1993.1626 · Cited by 12,977 · see citing works
The PSIPRED protein structure prediction server
McGuffin, L. J., Bryson, K., & Jones, D. T. (2000) · Bioinformatics · doi:10.1093/bioinformatics/16.4.404 · Cited by 3,841 · see citing works
Multiple Sequence Alignment Using ClustalW and ClustalX
Thompson, J., Gibson, T. J., & Higgins, D. G. (2002) · Current Protocols in Bioinformatics · doi:10.1002/0471250953.bi0203s00 · Cited by 2,989 · see citing works
Geraghty, R. J., Krummenacher, C., Cohen, G. H., Eisenberg, R. J., & Spear, P. G. (1998) · Science · doi:10.1126/science.280.5369.1618 · Cited by 907 · see citing works
Comparative protein modeling by satisfaction of spatial restraints
⩽ali, A. (1995) · Molecular Medicine Today · doi:10.1016/s1357-4310(95)91170-7 · Cited by 785 · see citing works
Structure, Function, and Inhibition of Chemokines
Fernandez, E. J., & Lolis, E. (2002) · Annual Review of Pharmacology and Toxicology · doi:10.1146/annurev.pharmtox.42.091901.115838 · Cited by 609 · see citing works
Herpes simplex virus: receptors and ligands for cell entry
Spear, P. G. (2004) · Cellular Microbiology · doi:10.1111/j.1462-5822.2004.00389.x · Cited by 582 · see citing works
Viral exploitation and subversion of the immune system through chemokine mimicry
Murphy, P. M. (2001) · Nature Immunology · doi:10.1038/84214 · Cited by 336 · see citing works
Roop, C., Hutchinson, L., & Johnson, D. C. (1993) · Journal of Virology · doi:10.1128/jvi.67.4.2285-2297.1993 · Cited by 315 · see citing works
Chemokine Receptors: Keys to AIDS Pathogenesis?
Littman, D. R. (1998) · Cell · doi:10.1016/s0092-8674(00)81429-4 · Cited by 304 · see citing works
Crystal structure of the conserved herpesvirus fusion regulator complex gH–gL
Chowdary, T. K., Cairns, T. M., Atanasiu, D., Cohen, G. H., Eisenberg, R. J., & Heldwein, E. E. Z. (2010) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.1837 · Cited by 238 · see citing works
Smith, C. A., Smith, T. D., Smolak, P. J., Friend, D. J., Hagen, H., GERHART, M. J., Park, L., Pickup, D. J., Torrance, D., Mohler, K. M., et al. (1997) · Virology · doi:10.1006/viro.1997.8730 · Cited by 189 · see citing works
Crystal structure of the Epstein-Barr virus (EBV) glycoprotein H/glycoprotein L (gH/gL) complex
Matsuura, H., Kirschner, A. N., Longnecker, R., & Jardetzky, T. S. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1011806108 · Cited by 162 · see citing works
Rajarathnam, K., Sykes, B. D., Dewald, B., et al. (1999) · Biochemistry · doi:10.1021/bi990033v · Cited by 81 · see citing works
Patrone, M., Secchi, M., Fiorina, L., et al. (2005) · Journal of Virology · doi:10.1128/jvi.79.13.8361-8373.2005 · Cited by 74 · see citing works
Late expression of a beta chemokine homolog by murine cytomegalovirus
MacDonald, M. R., Li, X., & Virgin, H. W. (1997) · Journal of Virology · doi:10.1128/jvi.71.2.1671-1678.1997 · Cited by 70 · see citing works
Saccoccio, F. M., Sauer, A., Cui, X., et al. (2011) · Vaccine · doi:10.1016/j.vaccine.2011.01.079 · Cited by 57 · see citing works
Viral chemokine-modulatory proteins: tools and targets
Boomker, J. M., de Leij, L. F. M. H., THE, T. H., & Harmsen, M. C. (2005) · Cytokine & Growth Factor Reviews · doi:10.1016/j.cytogfr.2004.12.002 · Cited by 42 · see citing works
Cytomegalovirus CC Chemokine Promotes Immune Cell Migration
Totonchy, J. E., Denton, M. C., Kreklywich, C. N., et al. (2012) · Journal of Virology · doi:10.1128/jvi.00452-12 · Cited by 34 · see citing works
Molecular Mimicry by Cytomegaloviruses
Vink, C., Beisser, P. S., & Bruggeman, C. A. (1999) · Intervirology · doi:10.1159/000053970 · Cited by 30 · see citing works
Kaptein, S. J. F., van Cleef, K. W. R., Gruijthuijsen, Y. K., et al. (2004) · Virus Genes · doi:10.1023/b:viru.0000032788.53592.7c · Cited by 29 · see citing works
Neutralizing Activity of Saliva against Cytomegalovirus
Saccoccio, F. M., Gallagher, M. K., Adler, S. P., et al. (2011) · Clinical and Vaccine Immunology · doi:10.1128/cvi.05128-11 · Cited by 27 · see citing works
Herpes glycoprotein gL is distantly related to chemokine receptor ligands
Wyrwicz, L. S., & Rychlewski, L. (2007) · Antiviral Research · doi:10.1016/j.antiviral.2006.11.015 · Cited by 13 · see citing works
Self-citationMaclean, C. (2003) · Humana Press eBooks · doi:10.1385/0-89603-347-3:9 · Cited by 11 · see citing works
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Rey, N. L., Wesson, D. W., & Brundin, P. (2018) · Neurobiology of Disease · doi:10.1016/j.nbd.2016.12.013 · Cited by 257 · see citing works
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- Authors
- Malkowska, M., Kokoszynska, K., Dymecka, M., Rychlewski, L., & Wyrwicz, L. S.
- Affiliations
- BioInfoBank Institute (PL)
- The Maria Sklodowska-Curie National Research Institute of Oncology (PL)
- Corresponding author
- Wyrwicz, Lucjan S
- ORCID
- Wyrwicz, Lucjan S
- Venue
- Virology Journal
- Published
- 2013-01-02
- Volume
- 10
- Issue
- 1
- Pages
- 1-1
- ISSN
- 1743-422X (ISSN-L)
- PMC
- PMC3598415
- OpenAlex
- W2109736846
- Cited by
- 243
- References
- 27
- Citations by year
- 2026: 2 · 2025: 5 · 2024: 7 · 2023: 9 · 2022: 6 · 2021: 49 · 2020: 22 · 2019: 16 · 2018: 17 · 2017: 46 · 2016: 29 · 2015: 15 · 2014: 13 · 2013: 6 · 2012: 1
- FWCI
- 15.16
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- Locations
- Virology Journal (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- Narodowe Centrum Badań i Rozwoju
- Topics
- Health Sciences › Medicine › Epidemiology › Herpesvirus Infections and Treatments
- Health Sciences › Medicine › Epidemiology › Cytomegalovirus and herpesvirus research
- Health Sciences › Medicine › Oncology › Viral-associated cancers and disorders
- Keywords
- glycoprotein L, Alphaherpesvirinae, Gammaherpesvirinae, herpes simplex virus type 2, Epstein-Barr virus, human cytomegalovirus, chemokine receptors, virus transmission, gH/gL complex, herpesvirus infection
- MeSH terms
- Amino Acid Sequence, Models, Molecular, Molecular Sequence Data, Protein Conformation, Viral Envelope Proteins, Sequence Alignment, Alphaherpesvirinae, Betaherpesvirinae, Gammaherpesvirinae, Chemokines, Evolution, Molecular
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