The Phenylpropanoid Pathway in Arabidopsis
Open accessAbstract
The phenylpropanoid pathway serves as a rich source of metabolites in plants, being required for the biosynthesis of lignin, and serving as a starting point for the production of many other important compounds, such as the flavonoids, coumarins, and lignans. In spite of the fact that the phenylpropanoids and their derivatives are sometimes classified as secondary metabolites, their relevance to plant survival has been made clear via the study of Arabidopsis and other plant species. As a model system, Arabidopsis has helped to elucidate many details of the phenylpropanoid pathway, its enzymes and intermediates, and the interconnectedness of the pathway with plant metabolism as a whole. These advances in our understanding have been made possible in large part by the relative ease with which mutations can be generated, identified, and studied in Arabidopsis. Herein, we provide an overview of the research progress that has been made in recent years, emphasizing both the genes (and gene families) associated with the phenylpropanoid pathway in Arabidopsis, and the end products that have contributed to the identification of many mutants deficient in the phenylpropanoid metabolism: the sinapate esters.
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Aromatic amino acids are precursors of a range of phenolic compounds and act as intermediates between general and specialized metabolism.
“Aromatic amino acids are precursors of a range of phenolic compounds. They act as intermediates between general and specialized metabolism.”
Aromatic amino acid biosynthesis occurs via the shikimate pathway, which uses intermediates from pentose phosphate and glycolysis to produce chorismic acid in plastids, the precursor of all aromatic amino acids.
“This pathway uses intermediates from the pentose phosphate and glycolysis pathways to produce chorismic acid in plastids, which is the precursor of all aromatic amino acids (Figure 3) [43,44,45].”
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- Authors
- Fraser, C. M., & Chapple, C.
- Affiliations
- Purdue University West Lafayette (US)
- Corresponding author
- Chapple, Clint
- Venue
- The Arabidopsis Book
- Publisher
- BioOne
- Published
- 2011-01
- Volume
- 9
- Pages
- e0152
- ISSN
- 1543-8120 (ISSN-L)
- PMC
- PMC3268504
- OpenAlex
- W2069624025
- Cited by
- 860
- References
- 1
- Citations by year
- 2026: 76 · 2025: 92 · 2024: 108 · 2023: 83 · 2022: 86 · 2021: 77 · 2020: 90 · 2019: 57 · 2018: 45 · 2017: 43 · 2016: 31 · 2015: 23 · 2014: 17 · 2013: 26 · 2012: 4
- FWCI
- 6.24
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- The Arabidopsis Book (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- BioOne Complete (BioOne) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant Gene Expression Analysis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant biochemistry and biosynthesis
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Keywords
- phenylpropanoid pathway, Arabidopsis thaliana, lignin biosynthesis, flavonoids, coumarins, lignans, secondary metabolites, mutant analysis, gene family, plant metabolism
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