CoChat
Sign Up
Cited by 152

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Oxidative Stress Inactivates Cobalamin-Independent Methionine Synthase (MetE) in Escherichia coli

Hondorp, Elise R, Matthews, Rowena G·2004·PLoS Biology
DOI 10.1371/journal.pbio.0020336PMC PMC521173
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1371/journal.pbio.0020336

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 61

  1. 1999, Regulation of the OxyR transcription factor by hydrogen peroxide and the cellular thiol-disulfide status., Proc Natl Acad Sci U S A, 96, 6161, 10.1073/pnas.96.11.6161 · DOI
  2. 1995, Superoxide dismutase protects against aerobic heat shock in Escherichia coli., J Bacteriol, 177, 3344, 10.1128/JB.177.11.3344-3346.1995 · DOI
  3. 1996, The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide., J Biol Chem, 271, 21037, 10.1074/jbc.271.35.21037 · DOI
  4. 1999, Isolation and identification of a 92-kDa stress induced protein from Candida albicans., Mycopathologia, 147, 13, 10.1023/A:1007036518330 · DOI
  5. 1986, Isolation of superoxide dismutase mutants in Escherichia coli: Is superoxide dismutase necessary for aerobic life?, EMBO J, 5, 623, 10.1002/j.1460-2075.1986.tb04256.x · DOI
  6. 1994a, Protein S-thiolation in hepatocytes stimulated by t-butyl hydroperoxide, menadione, and neutrophils., Arch Biochem Biophys, 310, 264, 10.1006/abbi.1994.1166 · DOI
  7. 1994b, S-thiolation of individual human neutrophil proteins including actin by stimulation of the respiratory burst: Evidence against a role for glutathione disulfide., Arch Biochem Biophys, 310, 273, 10.1006/abbi.1994.1167 · DOI
  8. 2002, Structural identification of a bacterial quorum-sensing signal containing boron., Nature, 415, 545, 10.1038/415545a · DOI
  9. 2002, Bacterial autoinduction: Looking outside the cell for new metabolic engineering targets., Microb Cell Fact, 1, 5, 10.1186/1475-2859-1-5 · DOI
  10. 2001a, Quorum signaling via AI-2 communicates the “metabolic burden” associated with heterologous protein production in Escherichia coli., Biotechnol Bioeng, 75, 439, 10.1002/bit.10034 · DOI
  11. 2001b, Mapping stress-induced changes in autoinducer AI-2 production in chemostat-cultivated Escherichia coli K-12., J Bacteriol, 183, 2918, 10.1128/JB.183.9.2918-2928.2001 · DOI
  12. 1995, Characterization of nonradioactive assays for cobalamin-dependent and cobalamin-independent methionine synthase enzymes., Anal Biochem, 228, 323, 10.1006/abio.1995.1358 · DOI
  13. 1990, Isoelectric focusing., Methods Enzymol, 182, 459, 10.1016/0076-6879(90)82037-3 · DOI
  14. 1997, Simultaneous introduction of multiple mutations using overlap extension PCR., Biotechniques, 22, 28, 10.2144/97221bm03 · DOI
  15. 1990, Molecular and cellular aspects of thiol-disulfide exchange., Adv Enzymol Relat Areas Mol Biol, 63, 69
  16. 1995, Thiol/disulfide exchange equilibria and disulfide bond stability., Methods Enzymol, 251, 8, 10.1016/0076-6879(95)51107-5 · DOI
  17. 1988, Posttranscriptional regulatory mechanisms in Escherichia coli., Annu Rev Biochem, 57, 199, 10.1146/annurev.bi.57.070188.001215 · DOI
  18. 1996, Cobalamin-independent methionine synthase from Escherichia coli: A zinc metalloenzyme., Biochemistry, 35, 12228, 10.1021/bi9615452 · DOI
  19. 1992, Comparison of cobalamin-independent and cobalamin-dependent methionine synthases from Escherichia coli: Two solutions to the same chemical problem., Biochemistry, 31, 6045, 10.1021/bi00141a013 · DOI
  20. 1996, Biosynthesis of methionine., 542
  21. 2002, In vivo aggregation of a single enzyme limits growth of Escherichia coli at elevated temperatures., Mol Microbiol, 46, 1391, 10.1046/j.1365-2958.2002.03257.x · DOI
  22. 2002, Quantitation of protein sulfinic and sulfonic acid, irreversibly oxidized protein cysteine sites in cellular proteins., Methods Enzymol, 348, 146, 10.1016/S0076-6879(02)48634-X · DOI
  23. 1975, Reduced nicotinamide adenine dinucleotide phosphate (NADPH)-dependent formation and breakdown of hydrogen peroxide during mixed function oxidation reactions in liver microsomes., Arch Biochem Biophys, 171, 385, 10.1016/0003-9861(75)90047-8 · DOI
  24. 1993, Folding in vivo of bacterial cytoplasmic proteins: Role of GroEL., Cell, 74, 909, 10.1016/0092-8674(93)90470-B · DOI
  25. 1999, Identification of in vivo substrates of the chaperonin GroEL., Nature, 402, 147, 10.1038/45977 · DOI
  26. 1999, Chaperone activity with a redox switch., Cell, 96, 341, 10.1016/S0092-8674(00)80547-4 · DOI
  27. 2002, OxyR: A molecular code for redox-related signaling., Cell, 109, 383, 10.1016/S0092-8674(02)00723-7 · DOI
  28. 2000, Regulation of protein function by S-glutathiolation in response to oxidative and nitrosative stress., Eur J Biochem, 267, 4928, 10.1046/j.1432-1327.2000.01601.x · DOI
  29. 1978, The glutathione status of cells., Int Rev Cytol, 54, 109, 10.1016/S0074-7696(08)60166-7 · DOI
  30. 1995, Diamide: An oxidant probe for thiols., Methods Enzymol, 251, 123, 10.1016/0076-6879(95)51116-4 · DOI
  31. 1999, Protein S-thiolation can mediate the inhibition of protein synthesis induced by tert-butyl hydroperoxide in isolated rat hepatocytes., Toxicol Appl Pharmacol, 160, 1, 10.1006/taap.1999.8757 · DOI
  32. 2004, Protein thiol modifications visualized in vivo., PLoS Biol, 2, e333, 10.1371/journal.pbio.0020333 · DOI
  33. 2003, Redox regulation of 3′-phosphoadenylylsulfate reductase from Escherichia coli by glutathione and glutaredoxins., J Biol Chem, 278, 22325, 10.1074/jbc.M302304200 · DOI
  34. 2002, Irreversible thiol oxidation in carbonic anhydrase III: Protection by S-glutathiolation and detection in aging rats., Biol Chem, 383, 649
  35. 1984, Methionine biosynthesis., 497
  36. 1986, Preparation and analysis of pteroylpolyglutamate substrates and inhibitors., Methods Enzymol, 122, 333, 10.1016/0076-6879(86)22190-4 · DOI
  37. 1999, Identification of thermolabile Escherichia coli proteins: Prevention and reversion of aggregation by DnaK and ClpB., EMBO J, 18, 6934, 10.1093/emboj/18.24.6934 · DOI
  38. 1982, Mutations affecting regulation of methionine biosynthetic genes isolated by use of met-lac fusions., J Bacteriol, 151, 609, 10.1128/JB.151.2.609-619.1982 · DOI
  39. 1974, Culture medium for enterobacteria., J Bacteriol, 119, 736, 10.1128/JB.119.3.736-747.1974 · DOI
  40. 1995, How to measure and predict the molar absorption coefficient of a protein., Protein Sci, 4, 2411, 10.1002/pro.5560041120 · DOI
  41. 1986, Determination of peroxisomal fatty acyl-CoA oxidase activity using a lauroyl-CoA-based fluorometric assay., Biochim Biophys Acta, 884, 585, 10.1016/0304-4165(86)90211-4 · DOI
  42. 2004, Glutaredoxins: Glutathione-dependent redox enzymes with functions far beyond a simple thioredoxin backup system., Antioxid Redox Signal, 6, 63, 10.1089/152308604771978354 · DOI
  43. 1997, The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm., J Biol Chem, 272, 15661, 10.1074/jbc.272.25.15661 · DOI
  44. 1983, Reassessment of Ellman's reagent., Methods Enzymol, 91, 49, 10.1016/S0076-6879(83)91010-8 · DOI
  45. 1987, Rapid isoelectric focusing in a vertical polyacrylamide minigel system., Anal Biochem, 167, 290, 10.1016/0003-2697(87)90166-7 · DOI
  46. 1971, Growth rate of Escherichia coli at elevated temperatures: Limitation by methionine., J Bacteriol, 107, 391, 10.1128/JB.107.2.391-396.1971 · DOI
  47. 1971, Growth rate of Escherichia coli at elevated temperatures: Reversible inhibition of homoserine trans-succinylase., J Bacteriol, 107, 397, 10.1128/JB.107.2.397-400.1971 · DOI
  48. 1990, Thioredoxin or glutaredoxin in Escherichia coli is essential for sulfate reduction but not for deoxyribonucleotide synthesis., J Bacteriol, 172, 1923, 10.1128/JB.172.4.1923-1929.1990 · DOI
  49. 1997, Use of vertical slab isoelectric focusing and immunoblotting to evaluate steady-state phosphorylation of eIF2α in cultured cells., Methods, 11, 419, 10.1006/meth.1996.0438 · DOI
  50. 2001, Redox environment of the cell as viewed through the redox state of the glutathione disulfide/glutathione couple., Free Radic Biol Med, 30, 1191, 10.1016/S0891-5849(01)00480-4 · DOI · Paper page
  51. 2003, Protein S-thiolation targets glycolysis and protein synthesis in response to oxidative stress in the yeast Saccharomyces cerevisiae., Biochem J, 374, 513, 10.1042/bj20030414 · DOI
  52. 1983, Proteins induced by aerobiosis in Escherichia coli., J Bacteriol, 154, 344, 10.1128/JB.154.1.344-350.1983 · DOI
  53. 1995, Protein sulfhydryls and their role in the antioxidant function of protein S-thiolation., Arch Biochem Biophys, 319, 1, 10.1006/abbi.1995.1261 · DOI
  54. 1989, Role of homocysteine in metR-mediated activation of the metE and metH genes in Salmonella typhimurium and Escherichia coli., J Bacteriol, 171, 3277, 10.1128/JB.171.6.3277-3281.1989 · DOI
  55. 1990, Ribosomes as sensors of heat and cold shock in Escherichia coli., Proc Natl Acad Sci U S A, 87, 5589, 10.1073/pnas.87.15.5589 · DOI
  56. 2002, Characterization of Escherichia coli null mutants for glutaredoxin 2., J Biol Chem, 277, 10861, 10.1074/jbc.M111024200 · DOI
  57. 1997, A novel methodology for assignment of disulfide bond pairings in proteins., Protein Sci, 6, 391, 10.1002/pro.5560060215 · DOI
  58. 1998, Optimization of the cleavage reaction for cyanylated cysteinyl proteins for efficient and simplified mass mapping., Anal Biochem, 258, 268, 10.1006/abio.1998.2596 · DOI
  59. 2003, LuxS quorum sensing: More than just a numbers game., Curr Opin Microbiol, 6, 191, 10.1016/S1369-5274(03)00028-6 · DOI
  60. 1997, The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex., Nature, 388, 741, 10.1038/41944 · DOI
  61. 1998, Disulfide bond catalysts in Escherichia coli., Methods Enzymol, 290, 59, 10.1016/S0076-6879(98)90007-6 · DOI

Cited by

Sorted by citations

Metadata

Authors
Hondorp, E. R., & Matthews, R. G.
Venue
PLoS Biology
Publisher
Public Library of Science (PLoS)
Published
2004-10-05
Volume
2
Issue
11
Pages
e336
ISSN
1545-7885
DOI
10.1371/journal.pbio.0020336
PMC
PMC521173
Cited by
152
References
1
Language
en
Licence
creativecommons.org/licenses/by/4.0/ (unspecified)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review