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SleepEEGNet: Automated sleep stage scoring with sequence to sequence deep learning approach

Open access
Mousavi, Sajad, Afghah, Fatemeh, Acharya, U. Rajendra·2019·PLOS ONE

Abstract

Electroencephalogram (EEG) is a common base signal used to monitor brain activities and diagnose sleep disorders. Manual sleep stage scoring is a time-consuming task for sleep experts and is limited by inter-rater reliability. In this paper, we propose an automatic sleep stage annotation method called SleepEEGNet using a single-channel EEG signal. The SleepEEGNet is composed of deep convolutional neural networks (CNNs) to extract time-invariant features, frequency information, and a sequence to sequence model to capture the complex and long short-term context dependencies between sleep epochs and scores. In addition, to reduce the effect of the class imbalance problem presented in the available sleep datasets, we applied novel loss functions to have an equal misclassified error for each sleep stage while training the network. We evaluated the performance of the proposed method on different single-EEG channels (i.e., Fpz-Cz and Pz-Oz EEG channels) from the Physionet Sleep-EDF datasets published in 2013 and 2018. The evaluation results demonstrate that the proposed method achieved the best annotation performance compared to current literature, with an overall accuracy of 84.26%, a macro F1-score of 79.66% and κ = 0.79. Our developed model can be applied to other sleep EEG signals and aid the sleep specialists to arrive at an accurate diagnosis. The source code is available at https://github.com/SajadMo/SleepEEGNet.

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Metadata

Authors
Mousavi, S., Afghah, F., & Acharya, U. R.
Venue
PLOS ONE
Published
2019-05-07
Volume
14
Issue
5
Pages
e0216456
ISSN
1932-6203 (ISSN-L)
OpenAlex
W2920016582
Cited by
531
References
35
FWCI
25.42
Type
journal article
Language
en
Open access
gold

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CoChat. (2026). Citation check: SleepEEGNet: Automated sleep stage scoring with sequence to sequence deep learning approach. https://app.cochat.ai/papers/10.1371/journal.pone.0216456
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Mousavi, S., Afghah, F., & Acharya, U. R. (2019). SleepEEGNet: Automated sleep stage scoring with sequence to sequence deep learning approach. PLOS ONE. https://doi.org/10.1371/journal.pone.0216456

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