Long noncoding RNAs: past, present, and future

Cites (269)

Items 201–269 of 269

1. Molecular coupling of Tsix regulation and pluripotency
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2. Staufen1 regulates diverse classes of mammalian transcripts
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3. Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability
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4. Transcriptional regulation of Oct4 by a long non-coding RNA antisense to Oct4-pseudogene 5
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5. Identification of an imprinting control region affecting the expression of all transcripts in the Gnas cluster
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6. Evolution of Genetic Systems
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12. PU.1 expression is modulated by the balance of functional sense and antisense RNAs regulated by a shared cis-regulatory element
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14. Intergenic transcription causes repression by directing nucleosome assembly
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15. N-myc mRNA Forms an RNA-RNA Duplex with Endogenous Antisense Transcripts
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16. Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3′ UTRs
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17. Natural antisense transcript stabilizes inducible nitric oxide synthase messenger RNA in rat hepatocytes
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18. Neutral evolution of ‘non-coding’ complementary DNAs
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19. Constraints and plasticity in genome and molecular-phenome evolution
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20. Distinct RNA motifs are important for coactivation of steroid hormone receptors by steroid receptor RNA activator (SRA)
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21. Competition between a noncoding exon and introns: Gomafu contains tandem UACUAAC repeats and associates with splicing factor-1
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22. The steroid receptor RNA activator is the first functional RNA encoding a protein
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23. TERRA biogenesis, turnover and implications for function
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24. Inheritance of Silent rDNA Chromatin Is Mediated by PARP1 via Noncoding RNA
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25. Steroid receptor RNA activator protein binds to and counteracts SRA RNA-mediated activation of MyoD and muscle differentiation
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26. The structure of NoRC‐associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus
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27. The LPS-Induced Transcriptional Upregulation of the Chicken Lysozyme Locus Involves CTCF Eviction and Noncoding RNA Transcription
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28. Eukaryotic Ribonuclease P: A Plurality of Ribonucleoprotein Enzymes
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29. Collision events between RNA polymerases in convergent transcription studied by atomic force microscopy
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30. Transcriptional Interferences in cis Natural Antisense Transcripts of Humans and Mice
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31. N-myc mRNA forms an RNA-RNA duplex with endogenous antisense transcripts.
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32. RNA structure and function in C/D and H/ACA s(no)RNPs
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33. Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays
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34. Chapter 7 Regulation of Imprinting in Clusters: Noncoding RNAs Versus Insulators
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35. Evolution of genome size across some cultivated Allium species
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36. Death and Resurrection of the Human IRGM Gene
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37. Expression of the thyroid hormone receptor gene, erbA , in B lymphocytes: Alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels
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39. X-chromosome inactivation mosaicism in the three germ layers and the germ line of the mouse embryo
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40. Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas
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41. Antibody-based therapies for malaria
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42. Igf2 imprinting does not require its own DNA methylation or H19 RNA
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43. A novel steroid receptor co-activator protein (SRAP) as an alternative form of steroid receptor RNA-activator gene: expression in prostate cancer cells and enhancement of androgen receptor activity
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44. Antisense RNA inhibits splicing of pre‐mRNA in vitro.
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45. Extensive relationship between antisense transcription and alternative splicing in the human genome
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46. Chromosomal RNA: Its Properties
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47. Control of RNA processing by a large non-coding RNA over-expressed in carcinomas
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48. In the loop: long range chromatin interactions and gene regulation
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49. The length of the transcript encoded from the Kcnq1ot1 antisense promoter determines the degree of silencing
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50. HS2 Enhancer Function Is Blocked by a Transcriptional Terminator Inserted between the Enhancer and the Promoter
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51. Gene expression from the c-erbA alpha/Rev-ErbA alpha genomic locus. Potential regulation of alternative splicing by opposite strand transcription.
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52. The search for a marsupial XIC reveals a break with vertebrate synteny
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53. Natural antisense transcript of natriuretic peptide precursor A (NPPA): structural organization and modulation of NPPA expression
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54. RNA Immunoprecipitation to Determine RNA-Protein Associations In Vivo
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55. Transcriptional Scaffolds for Heterochromatin Assembly
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56. Enox, a Novel Gene That Maps 10 kb Upstream of Xist and Partially Escapes X Inactivation
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57. Gene Expression--Where to Start?
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58. The HS2 Enhancer of the β-globin Locus Control Region Initiates Synthesis of Non-coding, Polyadenylated RNAs Independent of a cis-linked Globin Promoter
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59. Intergenic Transcription, Cell-Cycle and the Developmentally Regulated Epigenetic Profile of the Human Beta-Globin Locus
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60. Pluripotency factor binding and Tsix expression act synergistically to repress Xist in undifferentiated embryonic stem cells
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61. Long non-coding RNA-mediated mechanisms independent of the RNAi pathway in animals and plants
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62. Tsixdefective in splicing is competent to establishXistsilencing
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63. Response to “The Reality of Pervasive Transcription”
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64. Gene regulation by sense–antisense overlap of polyadenylation signals
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65. The Coupling of X-Chromosome Inactivation to Pluripotency
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66. Repeated DNA Still in Search of a Function
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67. Antisense RNA and p53 Regulation in Induced Murine Cell Differentiation
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68. RNA-binding proteins: If it looks like a sn(o)RNA…
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69. Localization of chromosomal RNA in human G-banded metaphase chromosomes
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