Stan : A Probabilistic Programming Language

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Items 901–1,000 of 1,020

1. Response of clonal versus non-clonal herbs to disturbance: Different strategies revealed
   Jana Martínková, Adam Klimeš, Javier Puy, Jitka Klimešová · 2020 · Perspectives in Plant Ecology Evolution and Systematics
2. Regional-scale variability in the movement ecology of marine fishes revealed by an integrative acoustic tracking network
   Claudia Friess, Susan K. Lowerre‐Barbieri, Gregg R. Poulakis, Neil Hammerschlag, Jayne M. Gardiner, Andrea M. Kroetz, K Bassos-Hull, Joel W. Bickford, EC Bohaboy, Robert D. Ellis et al. · 2021 · Marine Ecology Progress Series
3. A Causal Framework for Cross-Cultural Generalizability
   Dominik Deffner, Julia M. Rohrer, Richard L. McElreath · 2021
4. A neural substrate of sex-dependent modulation of motivation
   Julia Cox, Adelaide R. Minerva, Weston Fleming, Christopher A Zimmerman, Cameron L Hayes, Samuel Zorowitz, Akhil Bandi, Sharon Ornelas, Brenna McMannon, Nathan F. Parker et al. · 2023 · Nature Neuroscience
5. Lack of evidence for the match‐mismatch hypothesis across terrestrial trophic interactions
   Heather M. Kharouba, E. M. Wolkovich · 2023 · Ecology Letters
6. Synthesis of recovery patterns in microbial communities across environments
   Stephanie D. Jurburg, Shane A. Blowes, Ashley L. Shade, Nico Eisenhauer, Jonathan M. Chase · 2024 · Microbiome
7. Bayesian Neural Networks via MCMC: A Python-Based Tutorial
   Rohitash Chandra, Joshua A. Simmons · 2024 · IEEE Access
8. Misinformation detection on online social networks using pretrained language models
   Pir Noman Ahmad, Adnan Muhammad Shah, Kang Yoon Lee, Wazir Muhammad · 2025 · Information Processing & Management
9. Autonomous biomedical research with an artificial intelligence agent
   Kexin Huang, Serena Zhang, Hanchen Wang, Yuanhao Qu, Yingzhou Lu, Ryan Li, Yusuf Roohani, Lin Qiu, Shiyi Cao, G. L. Li et al. · 2026 · Science
10. The distribution and abundance of reef-associated predatory fishes on the Great Barrier Reef
    Michael J. Emslie, Alistair J. Cheal, Murray Logan · 2017 · Coral Reefs
11. Effects of pelagic longline hook size on species- and size-selectivity and survival
    Eric L. Gilman, Milani Y. Chaloupka, Michael K. Musyl · 2017 · Reviews in Fish Biology and Fisheries
12. The relative merit of empirical priors in non-identifiable and sloppy models: Applications to models of learning and decision-making
    Mikhail S. Spektor, David Kellen · 2018 · Psychonomic Bulletin & Review
13. On parametrized cold dense matter equation-of-state inference
    Thomas E. Riley, G. Raaijmakers, Anna L. Watts · 2018 · Monthly Notices of the Royal Astronomical Society
14. Local means local, does it? Regional identification and preferences for local candidates
    Sofía Collignon, Javier Sajuria · 2018 · Electoral Studies
15. 贝叶斯因子及其在JASP中的实现
    Hu Chuan-Peng, Xiangzhen Kong, ic-JanWagenmakers Er, ExanderLy Al, Kaiping Peng · 2018 · Advances in Psychological Science
16. Higher low back and neck pain in final year Swiss health professions’ students: worrying susceptibilities identified in a multi-centre comparison to the national population
    Rebecca J. Crawford, Thomas Volken, René Schaffert, Thomas Bücher · 2018 · BMC Public Health
17. Predictive shifts in free energy couple mutations to their phenotypic consequences
    Griffin Chure, Manuel Razo‐Mejia, Nathan M. Belliveau, Tal Einav, Zofii A. Kaczmarek, Stephanie L. Barnes, Mitchell Lewis, Rob Phillips · 2019 · Proceedings of the National Academy of Sciences
18. A Bayesian mixture model for the analysis of allelic expression in single cells
    Kwangbom Choi, Narayanan Raghupathy, Gary A. Churchill · 2019 · Nature Communications
19. From Nuisance to Novel Research Questions: Using Multilevel Models to Predict Heterogeneous Variances
    Houston Floyd Lester, Kristin L. Cullen, Ryan William Walters · 2019 · Organizational Research Methods
20. Principles Governing Establishment versus Collapse of HIV-1 Cellular Spread
    Jason M. Hataye, Joseph Paul Casazza, Katharine Best, C. Jason Liang, Taina T. Immonen, David R. Ambrozak, Samuel W. Darko, Amy R. Henry, Farida Laboune, Frank M. Maldarelli et al. · 2019 · Cell Host & Microbe
21. Nearly a half century of high but sustainable exploitation in the Dungeness crab (Cancer magister) fishery
    Kate Richerson, André Eric Punt, Daniel S. Holland · 2020 · Fisheries Research
22. Linking regional shifts in microbial genome adaptation with surface ocean biogeochemistry
    Catherine A. Garcia, George I. Hagstrom, Alyse A. Larkin · 2020 · Philosophical Transactions of the Royal Society B Biological Sciences
23. Bayesian survival analysis with BUGS
    Danilo Alvares, Elena Lázaro, Virgilio Gómez‐Rubio · 2021 · Statistics in Medicine
24. Continuous population-level monitoring of SARS-CoV-2 seroprevalence in a large European metropolitan region
    Marc Emmenegger, Elena De Cecco, David Lamparter, Raphaël P. B. Jacquat, Julien Riou, Dominik Menges, Tala Ballouz, Daniel V. Ebner, Matthias M. Schneider, Itzel Condado Morales et al. · 2023 · iScience
25. Electric Field Induced Wetting of a Hydrophobic Gate in a Model Nanopore Based on the 5-HT3 Receptor Channel
    Gianni Klesse, Stephen J. Tucker, Mark S.P. Sansom · 2020 · ACS Nano
26. Personalized prediction of daily eczema severity scores using a mechanistic machine learning model
    Guillem Hurault, Elisa Domínguez‐Hüttinger, Sinéad Langan, Hywel C Williams, Reiko J. Tanaka · 2020 · Clinical & Experimental Allergy
27. Estimating the extrinsic incubation period of malaria using a mechanistic model of sporogony
    Isaac J. Stopard, Thomas S. Churcher, Ben C. Lambert · 2021 · PLoS Computational Biology
28. Modeling changes in probabilistic reinforcement learning during adolescence
    Liyu Xia, Sarah L. Master, Maria Katharina Eckstein, Beth Baribault, Ronald E. Dahl, Linda Wilbrecht, Anne Gabrielle Eva Collins · 2021 · PLoS Computational Biology
29. Identifying spatio-temporal seizure propagation patterns in epilepsy using Bayesian inference
    A. N. Vattikonda, M. Hashemi, Viktor Sip, M. Woodman, F. Bartolomei, Viktor Jirsa · 2021 · Communications Biology
30. bamlss: A Lego Toolbox for Flexible Bayesian Regression (and Beyond)
    Nikolaus Umlauf, Nadja Klein, Thorsten Simon, Achim Zeileis · 2021 · Journal of Statistical Software
31. Simple, Distributed, and Accelerated Probabilistic Programming
    Dustin Tran, Matthew D. Hoffman, Dave Moore, Christopher Suter, Vasudevan, Srinivas, Alexey Radul, Matthew Johnson, Rif A. Saurous · 2018 · arXiv (Cornell University)
32. The power of frontal midline theta and post‐error slowing to predict performance recovery: Evidence for compensatory mechanisms
    Valadez, Emilio A., Simons, Robert F. · 2018 · Psychophysiology
33. An Ecological Momentary Assessment Study of Pain Intensity Variability: Ascertaining Extent, Predictors, and Associations With Quality of Life, Interference and Health Care Utilization Among Individuals Living With Chronic Low Back Pain
    M. Gabrielle Pagé, Lise I. Gauvin, Marie‐Pierre Sylvestre, Roy Nitulescu, Alina Dyachenko, Manon Choinière · 2022 · Journal of Pain
34. Measurements of the Hubble Constant with a Two-rung Distance Ladder: Two Out of Three Ain’t Bad
    W. D. Kenworthy, Adam G. Riess, Daniel M. Scolnic, Wenlong Yuan, José Luis Bernal, Dillon Brout, Stefano Casertano, D. O. Jones, Lucas M. Macri, Erik R. Peterson · 2022 · The Astrophysical Journal
35. The Sources of Sea‐Level Changes in the Mediterranean Sea Since 1960
    Francisco Mir Calafat, Thomas Frederikse, Kevin Horsburgh · 2022 · Journal of Geophysical Research Oceans
36. Leaf habit affects the distribution of drought sensitivity but not water transport efficiency in the tropics
    German Vargas G., Norbert Kunert, William M. Hammond, Z. Carter Berry, Leland K. Werden, Chris M. Smith‐Martin, Brett T. Wolfe, Laura Toro, Ariadna Mondragón‐Botero, Jesús N. Pinto‐Ledezma et al. · 2022 · Ecology Letters
37. The contribution of episodic long-term memory to working memory for bindings
    Lea Maria Bartsch, Klaus Oberauer · 2022 · Cognition
38. Ensemble Reweighting Using Cryo-EM Particle Images
    Wai Shing Tang, David Silva-Sánchez, Julian Giraldo-Barreto, Bob Carpenter, Sonya M. Hanson, Alex H. Barnett, Erik H. Thiede, Pilar Cossio · 2023 · The Journal of Physical Chemistry B
39. Scalable hierarchical BayeSN inference: investigating dependence of SN Ia host galaxy dust properties on stellar mass and redshift
    Matthew Grayling, Stephen Thorp, Kaisey S. Mandel, Suhail Dhawan, Ana Sofía M. Uzsoy, Benjamin M. Boyd, Erin E. Hayes, Sam M. Ward · 2024 · Monthly Notices of the Royal Astronomical Society
40. Adult age differences in the effects of processing on storage in working memory: A meta-analysis.
    Agnieszka J. Graham, Stephen Rhodes · 2019 · Psychology and Aging
41. Estimating Parameters From Multiple Time Series of Population Dynamics Using Bayesian Inference
    Benjamin Rosenbaum, Michael Raatz, Guntram Weithoff, Gregor F. Fussmann, Ursula Gaedke · 2019 · Frontiers in Ecology and Evolution
42. Refinement of eDNA as an early monitoring tool at the landscape‐level: study design considerations
    Erica L. Mize, Richard A. Erickson, Christopher M. Merkes et al. · 2019 · Ecological Applications
43. Using Conditional Restricted Boltzmann Machines to Model Complex Consumer Shopping Patterns
    Feihong Xia, Rabikar Chatterjee, Jerrold H. May · 2019 · Marketing Science
44. Neutron Valence Structure from Nuclear Deep Inelastic Scattering
    E. P. Segarra, Axel William Schmidt, T. Kutz · 2020 · Physical Review Letters
45. Cancer Exacerbates Chemotherapy-Induced Sensory Neuropathy
    Stephen Nick Housley, Paul Nardelli, Darío I. Carrasco, Travis M. Rotterman, Emily Pfahl, Lilya V. Matyunina, John F. McDonald, Timothy C. Cope · 2020 · Cancer Research
46. Bayesian and frequentist testing for differences between two groups with parametric and nonparametric two‐sample tests
    Riko Kelter · 2020 · Wiley Interdisciplinary Reviews Computational Statistics
47. Investigating personalized exit choice behavior in fire accidents using the hierarchical Bayes estimator of the random coefficient logit model
    Xiang Song, Ruggiero Lovreglio · 2020 · Analytic Methods in Accident Research
48. Bayesian synthesis of probabilistic programs for automatic data modeling
    Feras A. Saad, Marco Cusumano-Towner, Ulrich Schaechtle, Martin Rinard, Vikash K. Mansinghka · 2019 · DSpace@MIT (Massachusetts Institute of Technology)
49. Merging experiments and computer simulations in X-ray Computed Tomography probability of detection analysis of additive manufacturing flaws
    Felix Hoyean Kim, Adam L. Pintar, Anne-Françoise Obaton · 2021 · NDT & E International
50. Plant traits are differentially linked to performance in a semiarid ecosystem
    Jennifer L. Funk, Julie E. Larson, Joni Ricks‐Oddie · 2021 · Ecology
51. Half‐Century Winter Duck Abundance and Temperature Trends in the Mississippi and Atlantic Flyways
    Timothy D. Meehan, Richard M. Kaminski, Geoffrey S. LeBaron, Nicole L. Michel, Brooke L. Bateman, Chad B. Wilsey · 2021 · Journal of Wildlife Management
52. Working memory recruits long-term memory when it is beneficial: Evidence from the Hebb effect.
    Eda Mızrak, Klaus Oberauer · 2021 · Journal of Experimental Psychology General
53. Testing Causal Theories with Learned Proxies
    Dean Knox, Christopher Lucas, Wendy K. Tam Cho · 2022 · Annual Review of Political Science
54. Marine protected areas do not buffer corals from bleaching under global warming
    Jack V. Johnson, Jaimie T. A. Dick, Daniel Pincheira‐Donoso · 2022 · BMC Ecology and Evolution
55. Probabilistic programming with programmable inference
    Vikash K. Mansinghka, Ulrich Schaechtle, Shivam Handa, Alexey Radul, Yutian Chen, Martin Rinard · 2018 · ACM SIGPLAN Conference on Programming Language Design and Implementation (PLDI)
56. Enhancing learning and retention through the distribution of practice repetitions across multiple sessions
    Walsh, Matthew M., Krusmark, Michael A., Jastrembski, Tiffany, Hansen, Devon A., Honn, Kimberly A., Gunzelmann, Glenn · 2023 · Memory & Cognition
57. The function‐dominance correlation drives the direction and strength of biodiversity–ecosystem functioning relationships
    Michael Crawford, Kathryn E. Barry, Adam Thomas Clark, Caroline E. Farrior, Jes Hines, Emma R. Ladouceur, Jeremy W. Lichstein, Isabelle Maréchaux, Felix May, Akira S. Mori et al. · 2021 · Ecology Letters
58. Checking for Prior-Data Conflict Using Prior-to-Posterior Divergences
    David John Nott, Xueou Wang, Michael J. Evans, Berthold‐Georg Englert · 2020 · Statistical Science
59. Multivariate outlier detection in medicare claims payments applying probabilistic programming methods
    Richard A. Bauder, Taghi M. Khoshgoftaar · 2017 · Health Services and Outcomes Research Methodology
60. Fish-Habitat Relationships Along the Estuarine Gradient of the Sacramento-San Joaquin Delta, California: Implications for Habitat Restoration
    Matthew J. Young, Frederick V. Feyrer, Denise D. Colombano · 2018 · Estuaries and Coasts
61. Diverse knowledge systems reveal social–ecological dynamics that inform species conservation status
    L. Lee, J. Thorley, J. Watson, Mike Reid, A. Salomon · 2018 · Conservation Letters
62. The influence of crown and stem characteristics on timber quality in softwoods
    Luka Krajnc, Niall Farrelly, Annette M. Harte · 2018 · Forest Ecology and Management
63. HydroMix v1.0: a new Bayesian mixing framework for attributing uncertain hydrological sources
    Harsh Beria, Joshua Larsen, Anthony Michelon, Natalie Ceperley, Bettina Schaefli · 2020 · Geoscientific model development
64. Fitting mechanistic epidemic models to data: A comparison of simple Markov chain Monte Carlo approaches
    Michael Li, Jonathan G. Dushoff, Benjamin M. Bolker · 2018 · Statistical Methods in Medical Research
65. A modern retrospective on probabilistic numerics
    C. J. Oates, T. J. Sullivan · 2019 · Statistics and Computing
66. Time‐varying responses of lake metabolism to light and temperature
    Joseph S. Phillips · 2019 · Limnology and Oceanography
67. First evaluation of resistance to both a California OsHV-1 variant and a French OsHV-1 microvariant in Pacific oysters
    Konstantin Divilov, Blaine Schoolfield, Benjamín Morga · 2019 · BMC Genetics
68. Bayesian estimation of mixed multinomial logit models: Advances and simulation-based evaluations
    Prateek Bansal, Rico Krueger, Michel Bierlaire · 2019 · Transportation Research Part B Methodological
69. Apathy is associated with reduced precision of prior beliefs about action outcomes.
    Frank Hubert Hezemans, Noham Wolpe, James Benedict Rowe · 2020 · Journal of Experimental Psychology General
70. A generalized many-facet Rasch model and its Bayesian estimation using Hamiltonian Monte Carlo
    Uto, Masaki, Ueno, Maomi · 2020 · Behaviormetrika
71. Hybridizing physical and data-driven prediction methods for physicochemical properties
    Fabian Jirasek, Robert Bamler, Stephan Mandt · 2020 · Chemical Communications
72. A modern retrospective on probabilistic numerics
    Chris J. Oates, T. J. Sullivan · 2019 · Refubium (Universitätsbibliothek der Freien Universität Berlin)
73. Predicting the impact of outdoor vector control interventions on malaria transmission intensity from semi-field studies
    Adrian Denz, Margaret Mendi Njoroge, Mgeni M. Tambwe, Clara Champagne, Fredros O. Okumu, Joop J. A. van Loon, Alexandra Hiscox, Adam Saddler, Ulrike Fillinger, Sarah Moore et al. · 2021 · Parasites & Vectors
74. PyAutoFit: A Classy Probabilistic Programming Language for Model Composition and Fitting
    James. Nightingale, Richard Hayes, Matthew Griffiths · 2021 · The Journal of Open Source Software
75. Heat-Treated Virus Inactivation Rate Depends Strongly on Treatment Procedure: Illustration with SARS-CoV-2
    Amandine Gamble, Robert J. Fischer, Dylan H. Morris, Kwe Claude Yinda, Vincent Jacobus Munster, James O. Lloyd‐Smith · 2021 · Applied and Environmental Microbiology
76. Lower versus higher oxygenation targets in critically ill patients with severe hypoxaemia: secondary Bayesian analysis to explore heterogeneous treatment effects in the Handling Oxygenation Targets in the Intensive Care Unit (HOT-ICU) trial
    Thomas Klitgaard, Olav Lilleholt Schjørring, Theis Lange, Morten Hylander Møller, Anders Perner, Bodil Steen Rasmussen, Anders Granholm · 2021 · British Journal of Anaesthesia
77. Rate of forgetting is independent of initial degree of learning
    Karim Rivera-Lares, Robert H. Logie, Alan Baddeley, Sergio Della Sala · 2022 · Memory & Cognition
78. Characterizing the Spatiotemporal Heterogeneity of the COVID-19 Vaccination Landscape
    Andrew Chua Tiu, Zachary Susswein, Alexes Merritt, Shweta Bansal · 2022 · American Journal of Epidemiology
79. Statistics in the Service of Science: Don’t Let the Tail Wag the Dog
    Henrik Singmann, David Kellen, Gregory E. Cox, Suyog Chandramouli, Clintin P. Davis‐Stober, John C. Dunn, Quentin F. Gronau, Michael L. Kalish, Sara D McMullin, Danielle Navarro et al. · 2022 · Computational Brain & Behavior
80. Multisensory Integration Dominates Hypnotisability and Expectations in the Rubber Hand Illusion
    Mel Slater, H. Henrik Ehrsson · 2022 · Frontiers in Human Neuroscience
81. Lessons from a regional analysis of forest recovery trajectories in West Africa
    Bienvenu H.K. Amani, Anny Estelle N’Guessan, Victor Van der Meersch, Géraldine Derroire, Camille Piponiot, Aka G.M. Elogne, Karidia Traoré, Justin Kassi N’Dja, Bruno Hérault · 2022 · Environmental Research Letters
82. Metal Mixing in the r-process Enhanced Ultrafaint Dwarf Galaxy Reticulum II
    A. Ji, J. Simon, I. Roederer, E. Magg, A. Frebel, Christian I. Johnson, R. Klessen, M. Magg, G. Cescutti, M. Mateo et al. · 2022 · Astronomical Journal
83. Bayesian Survival Analysis Using the rstanarm R Package
    Samuel L. Brilleman, Eren Elçi, Jacqueline L. Buros · 2020 · arXiv (Cornell University)
84. A sub-national analysis of the rate of transmission of COVID-19 in Italy
    Michaela Vollmer, Swapnil Mishra, H. Juliette T. Unwin et al. · 2020 · medRxiv
85. Understanding the Stochastic Partial Differential Equation Approach to Smoothing
    Miller, David L., Glennie, Richard, Seaton, Andrew E. · 2020 · Journal of Agricultural, Biological and Environmental Statistics
86. Developing, Analyzing and Sharing Multivariate Datasets: Individual Differences in L2 Learning Revisited
    Kazuya Saito, Konstantinos Macmillan, Tran Mai, Yui Suzukida, Hui Sun, Viktoria Magne, Meltem Ilkan, Akira Murakami · 2020 · Annual Review of Applied Linguistics
87. Competence Issue Ownership, Issue Positions and the Vote for the Greens and the Social Democrats
    Adrien Petitpas, Pascal Sciarini · 2022 · Swiss Political Science Review
88. Crosslinguistic word order variation reflects evolutionary pressures of dependency and information locality
    Michael Hahn, Yang Xu · 2022 · Proceedings of the National Academy of Sciences
89. BayesGmed: An R-package for Bayesian causal mediation analysis
    Belay Birlie Yimer, Mark Lunt, Marcus Beasley, Gary John Macfarlane, John McBeth · 2023 · PLoS ONE
90. The Social Validity of Behavioral Interventions: Seeking Input from Autistic Adults
    Kaitlynn M. P. Baiden, Zachary J. Williams, Rachel K. Schuck, Patrick S. R. Dwyer, Mian Wang · 2024 · Journal of Autism and Developmental Disorders
91. Estimating the effects of temperature on transmission of the human malaria parasite, Plasmodium falciparum
    Eunho Suh, Isaac J. Stopard, Ben C. Lambert, Jessica L. Waite, Nina L. Dennington, Thomas S. Churcher, Matthew Brian Thomas · 2024 · Nature Communications
92. Diffusion tensor imaging analysis along the perivascular space in the UK biobank
    Oliver James Clark, Ariane Delgado-Sánchez, Natàlia Cullell, Sônia A. L. Corrêa, Jerzy Krupiński, Nicola J. Ray · 2024 · Sleep Medicine
93. An Adenovirus Vaccine Expressing Ebola Virus Variant Makona Glycoprotein Is Efficacious in Guinea Pigs and Nonhuman Primates
    Shipo Wu, Andrea Kroeker, Gary Wong, Shihua He, Lihua Hou, Jonathan Audet, Haiyan Wei, Zhe Zhang, Lisa Fernando, Geoff Soule et al. · 2016 · The Journal of Infectious Diseases
94. Bayesian analysis of homogeneity studies in the production of reference materials
    Adriaan M. H. van der Veen · 2017 · Accreditation and Quality Assurance
95. Using modern methods for missing data analysis with the social relations model: A bridge to social network analysis
    Terrence D. Jorgensen, K. Jean Forney, Jeffrey A. Hall, Steven M. Giles · 2017 · Social Networks
96. Optimal Model Parameter Estimation from EEG Power Spectrum Features Observed during General Anesthesia
    Meysam Hashemi, Axel Hutt, Laure Buhry, JAMIE W. SLEIGH · 2018 · Neuroinformatics
97. Regional Extreme Precipitation Events: Robust Inference From Credibly Simulated GCM Variables
    David J. Farnham, James Doss‐Gollin, Upmanu Lall · 2018 · Water Resources Research
98. Disturbance Regimes Drive The Diversity of Regional Floristic Pools Across Guianan Rainforest Landscapes
    Stéphane Guitet, Daniel Sabatier, Olivier Brunaux, Pierre Couteron, Thomas Denis, Vincent Freycon, Sophie Gonzalez, Bruno Hérault, Gaëlle Jaouen, Jean‐François Molino et al. · 2018 · Scientific Reports
99. Feedback-Based Learning in Aging: Contributions and Trajectories of Change in Striatal and Hippocampal Systems
    Nichole Renee Lighthall, John M. Pearson, Scott A. Huettel, Roberto Eduardo Luis Cabeza · 2018 · Journal of Neuroscience
100. Adaptive Tuning of Hamiltonian Monte Carlo Within Sequential Monte Carlo
     Alexander Buchholz, Nicolas Chopin, Pierre E. Jacob · 2020 · Bayesian Analysis