The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.
ranger: A Fast Implementation of Random Forests for High Dimensional Data in C++ and R
Open accessAbstract
We introduce the C++ application and R package ranger. The software is a fast implementation of random forests for high dimensional data. Ensembles of classification, regression and survival trees are supported. We describe the implementation, provide examples, validate the package with a reference implementation, and compare runtime and memory usage with other implementations. The new software proves to scale best with the number of features, samples, trees, and features tried for splitting. Finally, we show that ranger is the fastest and most memory efficient implementation of random forests to analyze data on the scale of a genome-wide association study.
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PLINK: a tool set for whole-genome association and population-based linkage analyses.
Purcell, S., Neale, B., Todd-Brown, K., Thomas, L., Ferreira, M. A. R., Bender, D., Maller, J., Sklar, P., de Bakker, P. I. W., Daly, M. J., et al. (2007) · The American Journal of Human Genetics · doi:10.1086/519795 · Cited by 34,089
Modeling Survival Data: Extending the Cox Model
Therneau, T. M., & Grambsch, P. M. (2000) · Statistics for Biology and Health · doi:10.1007/978-1-4757-3294-8 · Cited by 8,674
Unbiased Recursive Partitioning: A Conditional Inference Framework
Hothorn, T., Hornik, K., & Zeileis, A. (2006) · Journal of Computational and Graphical Statistics · doi:10.1198/106186006x133933 · Cited by 4,021
GenABEL: an R library for genome-wide association analysis
Aulchenko, Y. S., Ripke, S., Isaacs, A., & van Duijn, C. M. (2007) · Bioinformatics · doi:10.1093/bioinformatics/btm108 · Cited by 1,836 · cited 2×
“Genotypes are stored in a memory efficient binary format, as inspired by Aulchenko et al. (2007); see Section 5 for the effect on memory usage.”
BackgroundMethodKruppa, J., Liu, Y., Biau, G., Kohler, M., König, I. R., Malley, J. D., & Ziegler, A. (2014) · Biometrical Journal · doi:10.1002/bimj.201300068 · Cited by 97
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Self-citationA comparison of single-cell trajectory inference methods
Saelens, W., Cannoodt, R., Todorov, H., & Saeys, Y. (2019) · Nature Biotechnology · doi:10.1038/s41587-019-0071-9 · Cited by 1,670
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Metadata
- Authors
- Wright, M. N., & Ziegler, A.
- Venue
- Journal of Statistical Software
- Publisher
- Foundation for Open Access Statistic
- Published
- 2017
- Volume
- 77
- Issue
- 1
- ISSN
- 1548-7660 (ISSN-L)
- OpenAlex
- W2157395790
- Cited by
- 3,340
- References
- 5
- FWCI
- 90.46
- Type
- journal article
- Language
- en
- Open access
- diamond
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