PreprintCited by 15Sphingolipid Metabolism and SignalingDrug Transport and Resistance MechanismsLysosomal Storage Disorders Research

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

Transport and inhibition of the sphingosine-1-phosphate exporter SPNS2

Open access

Preprint — published as 10.1038/s41467-025-55942-7

Abstract

Sphingosine-1-phosphate (S1P) is a signaling lysolipid critical to heart development, immunity, and hearing. Accordingly, mutations in the S1P transporter SPNS2 are associated with reduced white cell count and hearing defects. SPNS2 also exports the S1P-mimicking FTY720-P (Fingolimod) and thereby is central to the pharmacokinetics of this drug when treating multiple sclerosis. Here, we use a combination of cryo-electron microscopy, immunofluorescence, in vitro binding and in vivo S1P export assays, and molecular dynamic simulations to probe SPNS2’s substrate binding and transport. These results reveal the transporter’s binding mode to its native substrate S1P, the therapeutic FTY720-P, and the SPNS2-targeting inhibitor 33p. Further capturing an inward-facing apo state, our structures illuminate the protein’s mechanism for exchange between inward-facing and outward-facing conformations. Finally, using these structural, localization, and S1P transport results, we identify how pathogenic mutations ablate the protein’s export activity and thereby lead to hearing loss.

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Crossref · 10.21203/rs.3.rs-3616536/v1

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Metadata

Authors
Sauer, D., Li, H., Pike, A., Chang, Y.-N., Prakaash, D., Gelova, Z., Stanka, J., Moreau, C., Scott, H., Wunder, F., Wolf, G., Scacioc, A., McKinley, G., Batoulis, H., Mukhopadhyay, S., Garofoli, A., Pinto-Fernandez, A., Kessler, B., Burgess-Brown, N., Štefanic, S., Wiedmer, T., Dürr, K., Puetter, V., Ehrmann, A., Khalid, S., Ingles-Prieto, A., & Superti-Furga, G.
Affiliations
  • University of Oxford (GB)
  • Nuvisan
  • CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
  • Bayer (Germany) (DE)
  • Austrian Academy of Sciences (AT)
  • TDI Mass Spectrometry Laboratory, Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, Roosevelt Drive, Oxford OX3 7FZ, UK
  • University of Zurich
  • University of Oxford
  • Bayer AG
Corresponding author
  • Sauer, David
  • Puetter, Vera
  • Ehrmann, Alexander
  • Khalid, Syma
Venue
Nature Communications
Published
2023-11-21
Volume
16
Issue
1
Pages
721-721
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4406471973
Cited by
15
References
1
Citations by year
2026: 8 · 2025: 4 · 2024: 3
FWCI
3.61
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • Research Square (acceptedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • McGill University
  • Wellcome Trust (060208/Z/00/Z, 093305/Z/10/Z)
  • Diamond Light Source
  • European Federation of Pharmaceutical Industries and Associations (875510)
  • European Commission (777372, HORIZON2020, 101034439, 875510)
  • Universität Wien
  • Medizinische Universität Wien
  • Innovative Medicines Initiative (101034439, 875510, 777372)
  • Engineering and Physical Sciences Research Council (EP/X035603, EP/X035603/1)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Sphingolipid Metabolism and Signaling
  • Health Sciences › Medicine › Oncology › Drug Transport and Resistance Mechanisms
  • Health Sciences › Medicine › Genetics (clinical) › Lysosomal Storage Disorders Research
Keywords
SPNS2, sphingosine-1-phosphate, fingolimod, transporter structure, substrate binding, pathogenic variants, hearing loss
MeSH terms
Fingolimod Hydrochloride, Animals, Biological Transport, Humans, Lysophospholipids, Mutation, Sphingosine, Cryoelectron Microscopy, Anion Transport Proteins, Hearing Loss, Mice, Molecular Dynamics Simulation, HEK293 Cells

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