CoChat
Sign Up
Cited by 22

The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.

Morphological Characteristics and Comparative Transcriptome Analysis of Three Different Phenotypes of Pristella maxillaris

Bian, Fangfang, Yang, Xuefen, Ou, Zhijie, Luo, Junzhi, Tan, Bozhen, Yuan, Mingrui, Chen, Tiansheng, Yang, Ruibin·2019·Frontiers in Genetics
DOI 10.3389/fgene.2019.00698PMC PMC6687772
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.3389/fgene.2019.00698

Cites

4 of 4 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Previous transcriptomic studies showed that some genes associated with melanin synthesis (tyr and tyrp1) are significantly down-regulated, and expression of purine metabolism pathway genes associated with iridescent cells (gart and hprt) is reduced.

    “Previous transcriptomic studies showed that some genes associated with melanin synthesis (i.e., tyr and tyrp1) are significantly down-regulated, and the expression of purine metabolism pathway genes associated with iridescent cells (such as gart and hprt) is reduced3.”

    From A complete telomere-to-telomere chromosome-level genome assembly of X-ray tetra (Pristella maxillaris) (2025) · cites this paper as [3]

    Split into 2 atoms — 1 confirmed, 1 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.

    Experimental — accuracy not yet measured

  • To date, only mitochondrial genome and transcriptome data have been reported for X-ray tetra, while no complete genome assembly exists.

    “To date, only mitochondrial genome9 and transcriptome data3 have been reported, while no complete genome assembly exists.”

    From A complete telomere-to-telomere chromosome-level genome assembly of X-ray tetra (Pristella maxillaris) (2025) · cites this paper as [3]

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 62

  1. Bagnara, 2007, On the blue coloration of vertebrates, Pigment Cell Res., 20, 14, 10.1111/j.1600-0749.2006.00360.x · DOI · Paper page
  2. Braasch, 2007, Evolution of pigment synthesis pathways by gene and genome duplication in fish, BMC Evol. Biol., 7, 74, 10.1186/1471-2148-7-74 · DOI
  3. Brenner, 2008, The protective role of melanin against UV damage in human skin, Photochem. Photobiol., 84, 539, 10.1111/j.1751-1097.2007.00226.x · DOI · Paper page
  4. Busca, 2000, Cyclic AMP a key messenger in the regulation of skin pigmentation, Pigment Cell Res., 13, 60, 10.1034/j.1600-0749.2000.130203.x · DOI
  5. Cheli, 2010, Fifteen-year quest for microphthalmia-associated transcription factor target genes, Pigment Cell Melanoma Res., 23, 27, 10.1111/j.1755-148X.2009.00653.x · DOI
  6. Croucher, 2013, De novo characterization of the gene-rich transcriptomes of two color-polymorphic spiders, Theridion grallator and T. californicum (Araneae: Theridiidae), with special reference to pigment genes, BMC Genomics, 14, 862, 10.1186/1471-2164-14-862 · DOI
  7. Darias, 2013, Morphological and molecular characterization of dietary-induced pseudo-albinism during post-embryonic development of Solea senegalensis (Kaup, 1858), PLoS One, 8, 10.1371/journal.pone.0068844 · DOI
  8. Dooley, 2013, On the embryonic origin of adult melanophores: the role of ErbB and Kit signalling in establishing melanophore stem cells in zebrafish, Development, 140, 1003, 10.1242/dev.087007 · DOI
  9. Failde, 2014, Morphological, immunohistochemical and ultrastructural characterization of the skin of turbot (Psetta maxima L), Tissue Cell, 46, 334, 10.1016/j.tice.2014.06.004 · DOI
  10. Fan, 2013, Skin transcriptome profiles associated with coat color in sheep, BMC Genomics, 14, 389, 10.1186/1471-2164-14-389 · DOI
  11. Fang, 2018, Generation of albino medaka (Oryzias latipes) by CRISPR/Cas9, J. Exp. Zool. B Mol. Dev. Evol., 330, 242, 10.1002/jez.b.22808 · DOI
  12. Franco-Belussi, 2016, Internal pigment cells respond to external UV radiation in frogs, J. Exp. Biol., 219, 1378, 10.1242/jeb.134973 · DOI
  13. Fujimura, 2009, Spatial and temporal regulation of Wnt/beta-catenin signaling is essential for development of the retinal pigment epithelium, Dev. Biol., 334, 31, 10.1016/j.ydbio.2009.07.002 · DOI
  14. Goda, 2013, Novel dichromatic chromatophores in the integument of the mandarin fish Synchiropus splendidus, Biol. Bull., 224, 14, 10.1086/BBLv224n1p14 · DOI
  15. Grabherr, 2011, Full-length transcriptome assembly from RNA-Seq data without a reference genome, Nat. Biotechnol., 29, 644, 10.1038/nbt.1883 · DOI
  16. Grether, 2004, Individual colour patches as multicomponent signals, Biol. Rev. Camb. Philos. Soc., 79, 583, 10.1017/S1464793103006390 · DOI
  17. Henning, 2013, Transcriptomics of morphological color change in polychromatic Midas cichlids, BMC Genomics, 14, 171, 10.1186/1471-2164-14-171 · DOI
  18. Henning, 2010, Genetic, comparative genomic, and expression analyses of the Mc1r locus in the polychromatic Midas cichlid fish (Teleostei, Cichlidae Amphilophus sp). species group, J. Mol. Evol., 70, 405, 10.1007/s00239-010-9340-4 · DOI
  19. Hirata, 2003, Pigment cell organization in the hypodermis of zebrafish, Dev. Dyn., 227, 497, 10.1002/dvdy.10334 · DOI
  20. Hirata, 2005, Pigment cell distributions in different tissues of the zebrafish, with special reference to the striped pigment pattern, Dev. Dyn., 234, 293, 10.1002/dvdy.20513 · DOI
  21. Hoekstra, 2006, A single amino acid mutation contributes to adaptive beach mouse color pattern, Science, 313, 101, 10.1126/science.1126121 · DOI
  22. Irion, 2016, The developmental genetics of vertebrate color pattern formation: lessons from zebrafish, Curr. Top. Dev. Biol., 117, 141, 10.1016/bs.ctdb.2015.12.012 · DOI · Paper page
  23. Jiang, 2014, Comparative transcriptome analysis reveals the genetic basis of skin color variation in common carp, PLoS One, 9, 10.1371/journal.pone.0108200 · DOI
  24. Kelsh, 2004, Genetics and evolution of pigment patterns in fish, Pigment Cell Res., 17, 326, 10.1111/j.1600-0749.2004.00174.x · DOI
  25. Kimura, 2017, pnp4a Is the causal gene of the Medaka Iridophore mutant guanineless, G3 (Bethesda), 7, 1357, 10.1534/g3.117.040675 · DOI · Paper page
  26. Krauss, 2013, Erratum: transparent, a gene affecting stripe formation in Zebrafish, encodes the mitochondrial protein Mpv17 that is required for iridophore survival, Biol. Open, 2, 979, 10.1242/bio.20136239 · DOI
  27. Leclercq, 2010, Morphological skin colour changes in teleosts, Fish Fish. (Oxf), 11, 159, 10.1111/j.1467-2979.2009.00346.x · DOI
  28. Levy, 2006, MITF: master regulator of melanocyte development and melanoma oncogene, Trends Mol. Med., 12, 406, 10.1016/j.molmed.2006.07.008 · DOI · Paper page
  29. Li, 2012, Identification of genes related to white and black plumage formation by RNA-Seq from white and black feather bulbs in ducks, PLoS One, 7, 10.1371/journal.pone.0036592 · DOI
  30. Li, 2015, Gene expression variations of red-white skin coloration in common carp (Cyprinus carpio), Int. J. Mol. Sci., 16, 21310, 10.3390/ijms160921310 · DOI
  31. Lowe, 1996, Suntanning in hammerhead sharks, Nature, 383, 677, 10.1038/383677a0 · DOI
  32. Ma, 2014, Comparative analysis of transcriptomes from albino and control sea cucumbers, Apostichopus japonicus, Acta Oceanol. Sin., 33, 55, 10.1007/s13131-014-0464-z · DOI
  33. Mao, 2005, Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabulary, Bioinformatics, 21, 3787, 10.1093/bioinformatics/bti430 · DOI
  34. Michiels, 2008, Red fluorescence in reef fish: a novel signalling mechanism, BMC Ecol., 8, 16, 10.1186/1472-6785-8-16 · DOI
  35. Muske, 1987, Control of a teleost social signal. II. Anatomical and physiological specializations of chromatophores, J. Comp. Physiol. A, 160, 99, 10.1007/BF00613445 · DOI
  36. Newton, 2005, Activation of the cAMP pathway by variant human MC1R alleles expressed in HEK and in melanoma cells, Peptides, 26, 1818, 10.1016/j.peptides.2004.11.031 · DOI
  37. Ng, 2009, Zebrafish mutations in gart and paics identify crucial roles for de novo purine synthesis in vertebrate pigmentation and ocular development, Development, 136, 2601, 10.1242/dev.038315 · DOI · Paper page
  38. Nilsson Skold, 2013, Rapid color change in fish and amphibians - function, regulation, and emerging applications, Pigment Cell Melanoma Res., 26, 29, 10.1111/pcmr.12040 · DOI
  39. Nilsson Skold, 2010, The capacity for internal colour change is related to body transparency in fishes, Pigment Cell Melanoma Res., 23, 292, 10.1111/j.1755-148X.2010.00674.x · DOI
  40. Opdecamp, 1997, Melanocyte development in vivo and in neural crest cell cultures: crucial dependence on the Mitf basic-helix-loop-helix-zipper transcription factor, Development, 124, 2377, 10.1242/dev.124.12.2377 · DOI
  41. Parichy, 2006, Evolution of danio pigment pattern development, Heredity (Edinb), 97, 200, 10.1038/sj.hdy.6800867 · DOI
  42. Parichy, 2007, Homology and the evolution of novelty during Danio adult pigment pattern development, J. Exp. Zool. B Mol. Dev. Evol., 308, 578, 10.1002/jez.b.21141 · DOI
  43. Park, 2006, MITF mediates cAMP-induced protein kinase C-beta expression in human melanocytes, Biochem. J., 395, 571, 10.1042/BJ20051388 · DOI
  44. Roberts, 2009, Sexual conflict resolved by invasion of a novel sex determiner in Lake Malawi cichlid fishes, Science, 326, 998, 10.1126/science.1174705 · DOI
  45. Robinson, 2010, edgeR: a Bioconductor package for differential expression analysis of digital gene expression data, Bioinformatics, 26, 139, 10.1093/bioinformatics/btp616 · DOI · Paper page
  46. Sakai, 1997, Modulation of murine melanocyte function in vitro by agouti signal protein, EMBO J., 16, 3544, 10.1093/emboj/16.12.3544 · DOI
  47. Schartl, 2016, What is a vertebrate pigment cell, Pigment Cell Melanoma Res., 29, 8, 10.1111/pcmr.12409 · DOI
  48. Sefc, 2014, Carotenoid-based coloration in cichlid fishes, Comp. Biochem. Physiol. A Mol. Integr. Physiol., 42, 10.1016/j.cbpa.2014.03.006 · DOI
  49. Shannon, 2003, Cytoscape: a software environment for integrated models of biomolecular interaction networks, Genome Res., 13, 2498, 10.1101/gr.1239303 · DOI · Paper page
  50. Voisey, 2001, A polymorphism study of the human Agouti gene and its association with MC1R, Pigment Cell Res., 14, 264, 10.1034/j.1600-0749.2001.140406.x · DOI
  51. Wang, 2014, Analysis of the skin transcriptome in two oujiang color varieties of common carp, PLoS One, 9, 10.1371/journal.pone.0090074 · DOI
  52. Wucherer, 2012, A fluorescent chromatophore changes the level of fluorescence in a reef fish, PLoS One, 7, 10.1371/journal.pone.0037913 · DOI
  53. Wucherer, 2014, Regulation of red fluorescent light emission in a cryptic marine fish, Front. Zool., 11, 1, 10.1186/1742-9994-11-1 · DOI
  54. Xing, 2011, Immunolocalization of Wnt5a during the hair cycle and its role in hair shaft growth in mice, Acta Histochem., 113, 608, 10.1016/j.acthis.2010.06.006 · DOI
  55. Yamaguchi, 1999, A Wnt5a pathway underlies outgrowth of multiple structures in the vertebrate embryo, Development, 126, 1211, 10.1242/dev.126.6.1211 · DOI
  56. Ye, 2006, WEGO: a web tool for plotting GO annotations, Nucleic Acids Res., 34, W293, 10.1093/nar/gkl031 · DOI
  57. Young, 2010, Gene ontology analysis for RNA-seq: accounting for selection bias, Genome Biol., 11, 10.1186/gb-2010-11-2-r14 · DOI · Paper page
  58. Yu, 2018, Karyotyping the Pristella Tetra (Pristella maxillaris), Chin. J Zool, 53, 99
  59. Zeng, 2015, Temperature-sensitive splicing of mitfa by an intron mutation in zebrafish, Pigment Cell Melanoma Res., 28, 229, 10.1111/pcmr.12336 · DOI
  60. Zhang, 2017, Comparative transcriptome analysis of molecular mechanism underlying gray-to-red body color formation in red crucian carp (Carassius auratus, red var), Fish Physiol. Biochem., 43, 1387, 10.1007/s10695-017-0379-7 · DOI
  61. Zhang, 2015, Morphological characters and transcriptome profiles associated with black skin and red skin in crimson snapper (Lutjanus erythropterus), Int. J. Mol. Sci., 16, 26991, 10.3390/ijms161126005 · DOI
  62. Zhu, 2018, Erratum: comparative transcriptome analysis identifies candidate genes related to skin color differentiation in red tilapia, Sci Rep., 8, 46979, 10.1038/srep46979 · DOI

Cited by

Sorted by citations

Metadata

Authors
Bian, F., Yang, X., Ou, Z., Luo, J., Tan, B., Yuan, M., Chen, T., & Yang, R.
Venue
Frontiers in Genetics
Publisher
Frontiers Media SA
Published
2019-08-02
Volume
10
ISSN
1664-8021
DOI
10.3389/fgene.2019.00698
PMC
PMC6687772
Cited by
22
References
4
Licence
creativecommons.org/licenses/by/4.0/ (vor)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review