Manipulating rumen microbiome and fermentation through interventions during early life: a review

Cited by (343)

Items 201–300 of 343

1. Microbial Enterotypes Shape the Divergence in Gut Fermentation, Host Metabolism, and Growth Rate of Young Goats
   Dangdang Wang, Guangfu Tang, Junjian Yu, Yuanyuan Li, Leiyu Feng, Huifeng Liu, Jiaxiao Li, Luyu Chen, Yangchun Cao, Junhu Yao · 2023 · Microbiology Spectrum
2. Crosstalk between innate immunity and rumen-fecal microbiota under the cold stress in goats
   Tao Luo, Jiangjiang Zhu, Kerui Li, Yongtao Li, Jun Li, Yu Chen, Heng-Bo Shi · 2024 · Frontiers in Immunology
3. Influence of maternal factors on the rumen microbiome and subsequent host performance1
   Hannah C Cunningham-Hollinger, Kathleen J Austin, K. M. Cammack · 2018 · Translational Animal Science
4. Long term effects of artificial rearing before weaning on the growth performance, ruminal microbiota and fermentation of fattening lambs
   Wenqin Huang, Kai Cui, Yong HAN, Jianmin Chai, Shi-qin WANG, Xiao-kang LÜ, Qiyu Diao, Naifeng Zhang · 2022 · Journal of Integrative Agriculture
5. Effects of whole maize high-grain diet feeding on colonic fermentation and bacterial community in weaned lambs
   Chao Cheng, Yuyang Yin, Gaorui Bian · 2022 · Frontiers in Microbiology
6. Evidence for the amnion-fetal gut-microbial axis in late gestation beef calves1
   Gwendolynn L Hummel, Kelly L Woodruff, Kathleen J Austin, Travis L Smith, Hannah C Cunningham-Hollinger · 2020 · Translational Animal Science
7. Effects of diets with different solid-to-liquid feed ratios with the same dry matter intake on the growth performance and gastrointestinal development of male Holstein calves
   Min Yu Piao, Jian Ma, Qiyu Diao, Yan Tu · 2021 · Animal Feed Science and Technology
8. Duration of dam contact had a long effect on calf rumen microbiota without affecting growth
   Laurianne Voland, Abimael Ortiz‐Chura, Jérémy Tournayre, Bruno Martin, Matthieu Bouchon, Alessandra Nicolao, Dominique Pomiès, Diego Pablo Morgavi, Milka Popova · 2025 · Frontiers in Veterinary Science
9. Early-life supplementation with mannan-rich fraction to regulate rumen microbiota, gut health, immunity, and growth performance in dairy goat kids
   Qingyong Hu, J.J. Man, J. Luo, F. Cheng, M. Yang, Gang Lin, P. Wang · 2024 · Journal of Dairy Science
10. Effects of different manganese sources on nutrient digestibility, fecal bacterial community, and mineral excretion of weaning dairy calves
    Huimin Ji, Dejin Tan, Yuhua Chen, Zhiqiang Cheng, Jingwen Zhao, Miao Lin · 2023 · Frontiers in Microbiology
11. Levels of Main Bacterial Phyla in the Gastrointestinal Tract of Sheep Depending on Parity and Age
    Jakub Smoliński, Natalia Szeligowska, Paulina Cholewińska, Katarzyna Czyż, Marzena Janczak · 2021 · Animals
12. The effects of different doses of compound enzyme preparations on the production performance, meat quality and rumen microorganisms of yak were studied by metagenomics and transcriptomics
    Chenyang Zhang, Yongfu La, Xiaoming Ma, Zhandui Pingcuo, Xiaoyun Wu, Xian Guo, Ping Yan, Dunzhu Luosang, Chunnian Liang · 2024 · Frontiers in Microbiology
13. Genetic correlations between enteric methane and traits of economic importance in a beef finishing system
    Clodagh V Ryan, T. Pabiou, Deirdre C. Purfield, David N Kelly, Craig P. Murphy, R.D. Evans · 2025 · Journal of Animal Science
14. Is climate neutral possible for the U.S. beef and dairy sectors?
    L. R. Thompson, Matthew R Beck, H. Larson, Jason E. Rowntree, Sara E Place, Kimberly R Stackhouse-Lawson · 2025 · Frontiers in Sustainable Food Systems
15. Investigation of maternal breed and rearing type on the calf rumen microbiome from day 28 through weaning1,2
    Kathleen J Austin, Hannah C Cunningham-Hollinger, Sierra R Powell, Kelly T Carpenter, K. M. Cammack · 2018 · Translational Animal Science
16. Effects of starter feeding on caecal mucosal bacterial composition and expression of genes involved in immune and tight junctions in pre-weaned twin lambs
    Daming Sun, Shengyong Mao, Weiyun Zhu, Junhua Liu · 2019 · Anaerobe
17. A metagenomic survey of lamb's pre- and post-weaning fecal microbiomes
    Nahlah N. Albakri, Nahla Alsayd Bouqellah, Iman Shabana · 2020 · Journal of Taibah University for Science
18. Ruminant microbiome data are skewed and unFAIR, undermining their usefulness for sustainable production improvement
    Abimael Ortiz‐Chura, Milka Popova, Diego Pablo Morgavi · 2024 · Animal Microbiome
19. Rumen microbiota inoculation indicates collaborative mechanisms enhancing propionate supply to alleviate weaning stress in lambs
    Tianrong Chen, Shaobo Yu, Kui Li, Kailang Huang, Weibing Shi, Hongwei Chen, Qihua Hong, Yuanyuan Zhang, Junhong Wang, Zhongtang Yu et al. · 2026 · Microbiome
20. Impact of dairy calf management practices on the intestinal tract microbiome pre-weaning
    Aisling Carroll, Matthew Bell, E.C.L. Bleach, Dann Turner, Lisa Williams · 2025 · Journal of Medical Microbiology
21. Effects of feed additives in the diet of male dairy beef calves on physiological status and rumen microbial fermentation pre- and postweaning
    Eva Romera-Recio, E. Ramos‐Morales, Alejandro Belanche, M. Hassan, P. Romero, A. Gómez, Inés Rivelli, Núria Llanes, J. Torra, D Yáñez-Ruiz · 2025 · Animal Feed Science and Technology
22. Multi-omics in vitro study of the salivary modulation of the goat rumen microbiome
    Juan Manuel Palma‐Hidalgo, Alejandro Belanche, Elisabeth Jiménez, A. Ignacio Martín-García, C. J. Newbold, Stuart Edward Denman, David R. Yáñez-Ruíz · 2023 · animal
23. Interaction between the Microbiome and Diet: The Hologenome Concept
    EUGENE B. ROSENBERG, Zilber Rosenberg · 2016 · Journal of Nutrition & Food Sciences
24. Control of Methanogenesis in Dairy Animals
    Karen Ann Beauchemin, Emilio Mauricio Ungerfeld, Robert J. Gruninger · 2021 · Encyclopedia of Dairy Sciences
25. Correlation between gastrointestinal morphological changes, enteric microbiota, and changes in live weight in dairy calves
    John I. Alawneh, Timothy W. J. Olchowy, Mohammad Mahmudul Hassan, Rachel Allavena, Martin Soust, Rafat A. M. Al Jassim · 2024 · JDS Communications
26. Early high nutrition enhances grass-fed beef productivity through epigenetically regulated muscle metabolism, altered early adipogenesis, and rumen fermentation dynamics
    D. Nishino, S. Khounsaknalath, Kazuyoshi Saito, A. Saito, Tsuyoshi Abe, E. Kobayashi, Fumio Ebara, Steffen Maak, Elke Albrecht, Michael Walter Pfaffl et al. · 2025 · animal
27. Increasing Rumen Microbial Diversity in Goats Favours the Adaptation to High‐Concentrate Diets With Minor Effects on Feed Utilization
    Alejandro Belanche, Juan Manuel Palma‐Hidalgo, David R. Yáñez-Ruíz · 2025 · Journal of Animal Physiology and Animal Nutrition
28. Supplementation of DHA-Gold pre and/or postnatally to goat kids modifies in vitro methane production and rumen morphology until 6 mo old1
    Alexis Ruíz-González, Sieglinde Debruyne, Lore Dewanckele, M Escobar, Leen Vandaele, Wim Van Den Broeck, Veerle Fievez · 2018 · Journal of Animal Science
29. Predicting the Digestive Tract Development and Growth Performance of Goat Kids Using Sigmoidal Models
    Mahmoud M. Abdelsattar, Yimin Zhuang, Kai Cui, Yanliang Bi, Naifeng Zhang · 2021 · Animals
30. Effects of ratios of yak to cattle inocula on methane production and fiber digestion in rumen in vitro cultures
    Weiwei Wang, Wei Guo, Jianxin Jiao, Emilio Mauricio Ungerfeld, Xiaoping Jing, Xiaodan Huang, A. Allan Degen, Yu Li, Sisi Bi, Ruijun Long · 2024 · Journal of Integrative Agriculture
31. Toward a Ruminant Gastronomy
    Kelly Donati · 2022 · Environmental Humanities
32. Alfalfa supplementation timing changes the rumen archaeal and fungal community composition and colonization in pre-weaning lambs
    Kenan Li, Haidong Du, Wenliang Guo, Meila Na, Renhua Na · 2024 · Frontiers in Microbiology
33. Pre-Exposure of Early-Weaned Lambs to a Herb-Clover Mix Does Not Improve Their Subsequent Growth
    Lukshman Jay. Ekanayake, Rene Anne Corner-Thomas, Lydia Margaret Cranston, Paul Richard Kenyon, Stephen Todd Morris, Sarah J. Pain · 2020 · Animals
34. Public acceptance of microbiome management strategy in dairy calves: a European survey on colostrum, probiotic provision and prolonged cow-calf contact
    Amer Ait Sidhoum, Anna Helena Stygar, Florence Bedoin, Jarkko K. Niemi · 2024 · animal
35. Maternal supplementation with Bacillus -based direct-fed microbials altered the maternal and offspring fecal microbiome
    Luciana Melo Sousa, Vinicius S Izquierdo, Bruno I Cappellozza, Philipe Moriel · 2025 · Translational Animal Science
36. Persistent auxiliary microbiome of early novel colonizers in the developing rumen with lasting functional significance
    Ori Furman, Gil Sorek, Sarah Moraïs, Liron Levin, Omar Eduardo Tovar-Herrera, Sarah Winkler, Itzhak Mizrahi · 2025 · The ISME Journal
37. Microbiota in the Early Lives of Sheep: A Short Overview on the Rumen Microbiota
    Antonio Bevilacqua, Suleman Khan, Mariangela Caroprese, Barbara Speranza, Angela Racioppo, Marzia Albenzio · 2025 · Animals
38. Physiological and Productive Impacts of Including Artificial Saliva in Lamb Diets: Growth, Carcass Traits, and Fermentation Efficiency
    Mutassim M. Abdelrahman, Ibrahim Abdullah Alhidary, Gamaleldin M. Suliman, Mohsen M. Alobre, Mohammed M. Qaid, Faisal A. Alshamiry, Abdulkareem Mohammed Matar · 2026 · Veterinary Sciences
39. Microbiome-host co-oscillation patterns in shaping ruminal ecosystem from birth to puberty in a goat model
    Jian Wu, Xiaoli Zhang, Zhiliang Tan, Jinzhen Jiao, Chuanshe Zhou · 2025 · Science China Life Sciences
40. Effects of maternal rumen microbiota on the development of the microbial communities in the gastrointestinal tracts of neonatal sika deer
    Yan Zhang, Shuang Liang, Seong-Ho Choi, Guangyu Li · 2024 · Journal of Animal Science and Technology
41. Characterization of the preweaned Holstein calf fecal microbiota prior to, during, and following resolution of uncomplicated gastrointestinal disease
    Rachel A. Claus-Walker, Giovana Simão Slanzon, Lily A. Elder, Holly R. Hinnant, Chris M. Mandella, Lindsay M. Parrish, Sophie C. Trombetta, Craig S. McConnel · 2024 · Frontiers in Microbiology
42. Ecological Aspects on Rumen Microbiome
    Emiliana Manesco Romagnoli, Maria Carolina Pezzo Kmit, Josiane Barros Chiaramonte, Maike Rossmann, Rodrigo Mendes · 2017 · Springer eBooks
43. Metagenomic Characterization and Volatile Compounds Determination in Rumen from Saanen Goat Kids Fed Olive Leaves
    Francesca Bennato, Camillo Martino, Marco Di Domenico, Andrea Ianni, Benli Chai, Lisa Di Marcantonio, Cesare Cammà, Giuseppe Martino · 2022 · Veterinary Sciences
44. Assessment of rumen microbiota in beef heifers with different feed efficiency and managed under different feeding systems
    Junhong Liu · 2020 · ERA: Education and Research Archive (University of Alberta)
45. Mechanisms Underlying the Effects of Rumen Microbiota Transplantation on the Growth and Development of Ruminants
    Yirun Zhao, Enkai Li, Yutao Qiu, Xiaokang Ma, Dingfu Xiao, Zhiqing Li · 2025 · Fermentation
46. A guide to network analysis, multi-omics integration, and applications in livestock microbiome research
    Lionel Kinkpe, Ahamba Ifeanyi Solomon, Yurui Niu, Naqash Goswami, Chinyere Mary-Cynthia Ikele, Di HU, Rauan Abdessan, Hu Zhigang, Wang Xia · 2025 · World Journal of Microbiology and Biotechnology
47. Bidirectional regulation of gut microbiota and young ruminant host: implications for intestinal development and mucosal immunity
    Mulugeta Walelegne, MA Junnan, Yuan Hao, Xiaoran Feng, Hunegnaw Abebe, Ruochen Yang, Luxin Kong, Yan Tu · 2026 · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology
48. Manipulation of neonatal ruminal populations at birth results in sustained effects on microbial populations and measures of health and production in merino and suffolk lambs
    Emma Catharine Greenwood, Valeria A. Torok, Bianca Agenbag, PI Hynd · 2024 · Livestock Science
49. Caecum transcriptome and associated microbial community in young calves with artificial dosing of rumen content obtained from an adult cow
    Wenli Li, Brianna Murphy, Anna Larsen · 2024 · Journal of Animal Science and Technology
50. Dynamics of Intestinal Mucosa Microbiota in Juvenile Sika Deer During Early Growth
    Songze Li, Ruina Mu, Yunxi Zhang, Shaoying Wang, André‐Denis G. Wright, Huazhe Si, Zhipeng Li · 2025 · International Journal of Molecular Sciences
51. Wybrane czynniki wpływające na mikrobiom układu pokarmowego przeżuwaczy i jego skład bazowy.
    Paulina Cholewińska, Natalia Szeligowska, Jakub Smoliński, Maciej Bawej · 2021 · Postępy Biochemii
52. Short- and long-term effects of early life exposure to concentrate or hay on feed sorting and rumen fermentation
    Jianxin Xiao, Muhammad Zahoor Khan, Gibson Maswayi Alugongo, Shuai Liu, Yulin Ma, Jingjun Wang, Tianyu Chen, Wei Wang, Yajing Wang, Zhijun Cao et al. · 2021 · Animal Feed Science and Technology
53. A Genomic View of Escherichia Coli Diversity from Dairy Calves
    Jen Fossen · 2019 · Minds at UW (University of Wisconsin)
54. Effects of Macleaya cordata extract on growth, health, gut morphology, and gut microbiota composition of calves
    Nadiia Stepanchenko · 2021
55. Distribution characteristics of gastric mucosal colonizing microorganisms in different glandular regions of Bactrian camels and their relationship with local mucosal immunity
    Jianfei Li, Fie Xie, Xueyan Wang, Wangdong Zhang, Cuicui Cheng, Xiuping Wu, Min Li, Xingmin Huo, Xin Gao, Wenhui Wang · 2024 · PLoS ONE
56. Effects of early weaning on the development of gastrointestinal tract, rumen microbiota and host gene regulation in goat kids
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57. Protein levels alter yak rumen microbiota profiles, meat properties, and longissimus dorsi metabolites
    Jiyuan Zhang, Shuxiang Wang, Shatuo Chai, Shengchun Xu, Ziming Zeng, Zhilong Wang, Xun Wang, Yingkui Yang, Shujie Liu, Jiaying Lv et al. · 2025 · Animal Bioscience
58. In vitro ruminal fermentation kinetics of alternative supplemental feeds formulated with by-products from food crops
    Mikeilah Daniella Elizabeth Scott, Eden Natalia John, Kegan Romelle Jones · 2025 · Dairy Science and Management
59. Sheep Nutrition: The Lasting Influence of Early High-Starch Diet *
    Michał Jamrogiewicz, Marcin Przybyło, Michał Baran, Sławomir Ziarko, Daria Gabryś, Edyta Molik, Zuzanna Flis, S. Świerk, Jarosław Kański, Renata Miltko et al. · 2025 · Annals of Animal Science
60. Different lifetime dietary strategies affect carcass characteristics and rumen function in Holstein steers
    H.M. Golder, Joshua M. Rehberger, Alexandra H. Smith, E. Block, Rod Polkinghorne, Holly Cuthbertson, Michael A. Campbell, Veronika Vicic, Garth Tarr, Jane C. Quinn et al. · 2025 · Animal Production Science
61. Impact of farming systems and welfare indicators on enteric methane emissions calculated from infrared-predicted milk fatty acids in Parmigiano Reggiano Consortium farms
    Marco Aurelio Ramirez Mauricio, Stefano Schiavon, Diana Giannuzzi, Nicolò Amalfitano, Sara Pegolo, Luigi Gallo, Marco Nocetti, Enrico Sturaro, Gustavo Martínez-Marín, Hugo Oswaldo Toledo-Alvarado et al. · 2025 · Journal of Dairy Science
62. Effects of dietary supplementation of pre-weaned lambs with live yeast on rumen fermentation, gut development, performance, and blood health indicators
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63. The influence of prenatal nutrition on ruminal microbiome of beef cattle
    Édison Furlan, Guilherme Henrique Gebim Polizel, Arícia Christofaro Fernandes, Bárbara Carolina Teixeira Prati, Gabriela do Vale Pombo, Germán Darío Ramírez-Zamudio, Heidge Fukumasu, Miguel Henrique de Almeida Santana · 2026 · Frontiers in Genetics
64. Early life treatment with Lacticaseibacillus rhamnosus strains drives reduced enteric methane emissions in dairy heifers
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65. Murciano-Granadina Goat Nutrition Including Local Feed Resources
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66. The Evolution of the Feed Industry Towards Its “Sustainabilization”
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67. Boosting the potential of cattle breeding using molecular biology, genetics, and bioinformatics approaches – a review
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68. Rumen microbiocenosis is a tool for the construction of artificial biosystems. Ruminal bioreactor (review)
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69. Indwelling robots for ruminant health monitoring: A review of elements
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70. Microbial inoculum effects on the rumen epithelial transcriptome and rumen epimural metatranscriptome in calves
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71. Genomics for Food Security With Efficient and Sustainable Livestock Production
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72. Microbial biotechnology
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73. ДОСЛІДЖЕННЯ АНТИМІКРОБНОЇ АКТИВНОСТІ ПРОБІОТИЧНИХ ШТАМІВ BACILLUS
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74. Utilization of exogenous feed enzymes as a way to enhance creep feeds – in vitro, in vivo, and ruminal microbiome evaluations
    Jeferson Menezes Lourenco · 2017
75. A batch culture study of the rumen bacterial community and the fermentative digestion of forage in cattle
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76. De invloed van voedings-, omgevings- en dierfactoren op het microbioom van herkauwers : Aanknopingspunten om de enterische methaanemissie van melkkoeien te verminderen via beinvloeding van het microbioom
    R.L.G. Zom, L.B. Sêbèk · 2021
77. Multi-Omics Study of The Salivary Modulation of The Rumen Microbiome
    Juan Manuel Palma‐Hidalgo, Alejandro Belanche, Elisabeth Jiménez, Antonio Ignacio Martín-García, C. J. Newbold, Stuart Edward Denman, David R. Yáñez-Ruíz · 2022 · Research Square
78. Analysis of Microbial Diversity: Regarding the (Paradoxical) Difficulty of Seeing Big in Metagenomics
    Chloé Vigliotti, Philippe Lopez, Eric P Bapteste · 2018 · Elsevier eBooks
79. Efecto de la alimentación en la fase de lactancia sobre la eficiencia de utilización del alimento en el período posdestete y su relación con la microbiota del tracto digestivo, el estatus oxidativo e inmunológico en el ganado ovino = Effects of early feed restriction during the post-weaning period on feed efficiency, gastrointestinal microbiota, anti-oxidant status and immunity parameters of lambs
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80. Effects of fiber sources in lamb starter feed on performance, chewing behavior, and blood energy metabolites
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81. Efecto de distintas dietas sobre el tiempo de rumia durante el periodo de predestete en reemplazos de lechería
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82. A composição de diferentes dietas e a idade de bezerros leiteiros afetam o microbioma ruminal e intestinal
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83. Effect of Sterilized Rumen Fluid Supplementation Ways in Lactation Period on Rumen Microflora of Calves after Weaning
    Xueyan Lin, Tian Zhang, Yue Qiang Jiang, Qiuling Hou, Yun Wang, Zhiyong Hu, Zhonghua Wang · 2020
84. Effect of Sterilized Rumen Fluid Supplementation Ways in Lactation Period on Rumen Microflora of Calves after Weaning
    Xueyan Lin, Tian Zhang, Yue Jiang, Qiuling Hou, Yun Wang, Zhiyong Hu, Zhonghua Wang · 2020
85. In Vitro Digestibility and Fermentation Kinetics of Agricultural By-product used as feed for Sheep in Trinidad, West Indies
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87. ЭФФЕКТИВНОСТЬ ПРИМЕНЕНИЯ КОРМОВЫХ ДРОЖЖЕЙ И ИХ ПРОИЗВОДНЫХ В ЖИВОТНОВОДСТВЕ
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88. Effects of lactic acid bacteria as putative probiotics and host genetic profile on rumen microbial ecology of two South African goat breeds.
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89. Additional file 1 of Effect of milk replacer allowance on calf faecal bacterial community profiles and fermentation
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90. Additional file 3 of Effects of rearing mode on gastro-intestinal microbiota and development, immunocompetence, sanitary status and growth performance of lambs from birth to two months of age
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91. Additional file 2 of Effects of rearing mode on gastro-intestinal microbiota and development, immunocompetence, sanitary status and growth performance of lambs from birth to two months of age
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92. Strategi Mitigasi Emisi Metana Pada Ruminansia: Sebuah Tinjauan
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93. Microbiome engineering and ruminants
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94. Probiotics Against Methanogens and Methanogenesis
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95. Comparative Analysis of Rumen Fermentation and Microbial Communities in Yaks of Different Ages
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96. The Influence of Prenatal Nutrition on Ruminal Metagenomics of Beef Cattle
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97. In Vitro Dietary Supplementation with Saponins, Tannins or Lipids of Different Nature to Improve Rumen Fermentation in Weaned Lambs and Gut Health Indicators in Caco-2 Cells
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98. Sodium Butyrate Supplementation in Whole Milk Modulates the Gastrointestinal Microbiota Without Altering the Resistome and Virulome in Preweaned Calves
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99. Fecal metabolome in Nelore bulls fed pre- and post-feedlot diets
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100. Additional file 2 of Microbiota members from body sites of dairy cows are largely shared within individual hosts throughout lactation but sharing is limited in the herd
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