Editorial: Machine Learning in Biomolecular Simulations
Open accessAbstract
"Interest in machine learning is growing in all fields of science, industry, and business. This interest was not primarily initiated by new theoretical findings. Interestingly, the theoretical basis of the majority of machine learning techniques, such as artificial neural networks, decision trees, or kernel methods, have been known for a relatively long time. Instead, there are other effects that triggered the recent boom of machine learning."
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The innovation in development and integration of MD simulations with deep learning can reproduce, interpret, predict, and generate data relating to the behavior of biological macromolecules.
“The innovation in the development and integration of MD simulations with deep learning can reproduce, interpret, predict, and generate data relating to the behavior of biological macromolecules.”
From AlphaFold, Artificial Intelligence (AI), and Allostery (2022) · cites this paper as [189]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cited by
Sorted by citations
AlphaFold, Artificial Intelligence (AI), and Allostery
Nussinov, R., Zhang, M., Liu, Y., & Jang, H. (2022) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.2c04346 · Cited by 190 · see citing works
Burn, M. J., & Popelier, P. L. A. (2022) · Journal of Computational Chemistry · doi:10.1002/jcc.27006 · Cited by 15 · see citing works
Zolotoukhina, T., Yamada, M., & Iwakura, S. (2021) · Biosensors · doi:10.3390/bios11020037 · Cited by 7 · see citing works
Artificial Intelligence-Assisted Production of Biomolecules
Wani, A. W., Khalangre, A. B., Rajan, R., Mirza, A. A., Yaseen, I., Abdi, G., Rahim, A., Tarighat, M. A., & Ingle, K. P. (2023) · Springer eBooks · doi:10.1007/978-981-19-7911-8_6 · Cited by 1 · see citing works
- Authors
- Verkhivker, G., Spiwok, V., & Gervasio, F. L.
- Affiliations
- Chapman University (US)
- University College London (GB)
- Venue
- Frontiers in Molecular Biosciences
- Publisher
- Frontiers Media SA
- Published
- 2019-08-29
- Volume
- 6
- Pages
- 76-76
- ISSN
- 2296-889X (ISSN-L)
- PMC
- PMC6727355
- OpenAlex
- W2968756798
- Cited by
- 4
- References
- 0
- Citations by year
- 2023: 1 · 2022: 2 · 2021: 1
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Frontiers in Molecular Biosciences (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Chapman University Digital Commons (Chapman University) (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- UCL Discovery (University College London) (submittedVersion)
- Topics
- Physical Sciences › Materials Science › Materials Chemistry › Machine Learning in Materials Science
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Physical Sciences › Computer Science › Computational Theory and Mathematics › Computational Drug Discovery Methods
- Keywords
- machine learning, biomolecular simulation, artificial neural networks, decision tree, kernel methods, molecular dynamics
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review