Cited by 28Histone Deacetylase Inhibitors ResearchEpigenetics and DNA MethylationGenomics and Chromatin Dynamics

HDAC4 in cancer: A multitasking platform to drive not only epigenetic modifications

Open access
Cuttini, Emma, Goi, Camilla, Pellarin, Ester, Vida, Riccardo, Brancolini, Claudio·2023·Frontiers in Molecular Biosciences

Abstract

Controlling access to genomic information and maintaining its stability are key aspects of cell life. Histone acetylation is a reversible epigenetic modification that allows access to DNA and the assembly of protein complexes that regulate mainly transcription but also other activities. Enzymes known as histone deacetylases (HDACs) are involved in the removal of the acetyl-group or in some cases of small hydrophobic moieties from histones but also from the non-histone substrate. The main achievement of HDACs on histones is to repress transcription and promote the formation of more compact chromatin. There are 18 different HDACs encoded in the human genome. Here we will discuss HDAC4, a member of the class IIa family, and its possible contribution to cancer development.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.3389/fmolb.2023.1116660

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

No citation lists for this paper

No citation lists for this paper yet — checked again daily.

References 230 · Cited by 28

Research works printed but not linked: 218

  1. Aloia L. (2022). Epigenetic regulation of cell-fate changes that determine adult liver regeneration after injury. Front. Cell Dev. Biol. 9, 643055. 10.3389/fcell.2021.643055 PMC7957008 33732709 · DOI
  2. Amodio N. Stamato M. A. Gullà A. M. Morelli E. Romeo E. Raimondi L. (2016). Therapeutic targeting of miR-29b/HDAC4 epigenetic loop in multiple myeloma. Mol. Cancer Ther. 15 (6), 1364– 1375. 10.1158/1535-7163.MCT-15-0985 27196750 · DOI
  3. Anand R. Beach A. Li K. Haber J. (2017). Rad51-mediated double-strand break repair and mismatch correction of divergent substrates. Nature 544 (7650), 377– 380. 10.1038/nature22046 28405019 PMC5544500 · DOI
  4. Backs J. Song K. Bezprozvannaya S. Chang S. Olson E. N. (2006). CaM kinase II selectively signals to histone deacetylase 4 during cardiomyocyte hypertrophy. J. Clin. Invest. 116 (7), 1853– 1864. 10.1172/JCI27438 16767219 PMC1474817 · DOI
  5. Backs J. Worst B. C. Lehmann L. H. Patrick D. M. Jebessa Z. Kreusse M. M. (2011). Selective repression of MEF2 activity by PKA-dependent proteolysis of HDAC4. J. Cell Biol. 195 (3), 403– 415. 10.1083/jcb.201105063 22042619 PMC3206346 · DOI
  6. Bartel D. P. (2004). MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 116 (2), 281– 297. 10.1016/s0092-8674(04)00045-5 14744438 · DOI
  7. Berdeaux R. Goebel N. Banaszynski L. Takemori H. Wandless T. Shelton G. D. (2007). SIK1 is a class II HDAC kinase that promotes survival of skeletal myocytes. Nat. Med. 13 (5), 597– 603. 10.1038/nm1573 17468767 · DOI
  8. Bindea G. Mlecnik B. Hackl H. Charoentong P. Tosolini M. Kirilovsky A. (2009). ClueGO: A Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. Bioinformatics 25 (8), 1091– 1093. 10.1093/bioinformatics/btp101 19237447 PMC2666812 · DOI · Paper page
  9. Bodily J. M. Mehta K. P. Laimins L. A. (2011). Human papillomavirus E7 enhances hypoxia-inducible factor 1-mediated transcription by inhibiting binding of histone deacetylases. Cancer Res. 71 (3), 1187– 1195. 10.1158/0008-5472.CAN-10-2626 21148070 PMC3077548 · DOI
  10. Bottomley M. J. Lo Surdo P. Di Giovine P. Cirillo A. Scarpelli R. Ferrigno F. (2008). Structural and functional analysis of the human HDAC4 catalytic domain reveals a regulatory structural zinc-binding domain. J. Biol. Chem. 283 (39), 26694– 26704. 10.1074/jbc.M803514200 18614528 PMC3258910 · DOI
  11. Bousset L. Gil J. (2022). Targeting senescence as an anticancer therapy. Mol. Oncol. 16 (21), 3855– 3880. 10.1002/1878-0261.13312 36065138 PMC9627790 · DOI
  12. Bracken C. P. Scott H. S. Goodall G. J. (2016). A network-biology perspective of microRNA function and dysfunction in cancer. Nat. Rev. Genet. 17 (12), 719– 732. 10.1038/nrg.2016.134 27795564 · DOI
  13. Brancolini C. Di Giorgio E. Formisano L. Gagliano T. (2021). Quis custodiet ipsos custodes (who controls the controllers)? Two decades of studies on HDAC9. Life (Basel) 27.11 (2), 90. 10.3390/life11020090 PMC7912504 33513699 · DOI
  14. Brancolini C. Gagliano T. Minisini M. (2022). HDACs and the epigenetic plasticity of cancer cells: Target the complexity. Pharmacol. Ther. 238, 108190. 10.1016/j.pharmthera.2022.108190 35430294 · DOI · Paper page
  15. Brancolini C. Iuliano L. (2020). Proteotoxic stress and cell death in cancer cells. Cancers (Basel) 12 (9), 2385. 10.3390/cancers12092385 32842524 PMC7563887 · DOI
  16. Cadot B. Brunetti M. Coppari S. Fedeli S. de Rinaldis E. Dello Russo C. (2009). Loss of histone deacetylase 4 causes segregation defects during mitosis of p53-deficient human tumor cells. Cancer Res. 69 (15), 6074– 6082. 10.1158/0008-5472.CAN-08-2796 19622775 · DOI
  17. Cai J. Y. Xu T. T. Wang Y. Chang J. J. Li J. Chen X. Y. (2018). Histone deacetylase HDAC4 promotes the proliferation and invasion of glioma cells. Int. J. Oncol. 53 (6), 2758– 2768. 10.3892/ijo.2018.4564 30272277 · DOI
  18. Cao K. Wang H. Fang Y. Wang Y. Wei L. Chen X. (2019). Histone deacetylase 4 promotes osteosarcoma cell proliferation and invasion by regulating expression of proliferating cell nuclear antigen. Front. Oncol. 9, 870. 10.3389/fonc.2019.00870 31552187 PMC6743440 · DOI
  19. Cao K. Wei L. Zhang Z. Guo L. Zhang C. Li Y. (2014). Decreased histone deacetylase 4 is associated with human osteoarthritis cartilage degeneration by releasing histone deacetylase 4 inhibition of runt-related transcription factor-2 and increasing osteoarthritis-related genes: A novel mechanism of human osteoarthritis cartilage degeneration. Arthritis Res. Ther. 16 (6), 491. 10.1186/s13075-014-0491-3 25424126 PMC4265470 · DOI
  20. Ceccaldi R. Rondinelli B. D'Andrea A. D. (2016). Repair pathway choices and consequences at the double-strand break. Trends Cell Biol. 26 (1), 52– 64. 10.1016/j.tcb.2015.07.009 26437586 PMC4862604 · DOI · Paper page
  21. Cernotta N. Clocchiatti A. Florean C. Brancolini C. (2011). Ubiquitin-dependent degradation of HDAC4, a new regulator of random cell motility. Mol. Biol. Cell 22 (2), 278– 289. 10.1091/mbc.E10-07-0616 21118993 PMC3020922 · DOI
  22. Chen J. Mandel E. M. Thomson J. M. Wu Q. Callis T. E. Hammond S. M. (2006). The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation. Nat. Genet. 38 (2), 228– 233. 10.1038/ng1725 16380711 PMC2538576 · DOI
  23. Chen S. Sang N. (2016). Hypoxia-inducible factor-1: A critical player in the survival strategy of stressed cells. J. Cell Biochem. 117 (2), 267– 278. 10.1002/jcb.25283 26206147 PMC4715696 · DOI
  24. Chen W. Sheng P. Huang Z. Meng F. Kang Y. Huang G. (2016). MicroRNA-381 regulates chondrocyte hypertrophy by inhibiting histone deacetylase 4 expression. Int. J. Sci. 17 (9), 1377. 10.3390/ijms17091377 PMC5037657 27563877 · DOI
  25. Chen Z. Zhang Z. Guo L. Wei X. Zhang Y. Wang X. (2020). The role of histone deacetylase 4 during chondrocyte hypertrophy and endochondral bone development. Bone Jt. Res. 9 (2), 82– 89. 10.1302/2046-3758.92.BJR-2019-0172.R1 PMC7229302 32435460 · DOI
  26. Cheng C. Yang J. Li S. W. Huang G. Li C. Min W. P. (2021). HDAC4 promotes nasopharyngeal carcinoma progression and serves as a therapeutic target. Cell Death Dis. 12 (2), 137. 10.1038/s41419-021-03417-0 33542203 PMC7862285 · DOI · Paper page
  27. Choi M. C. Ryu S. Hao R. Wang B. Kapur M. Fan C. M. (2014). HDAC4 promotes Pax7-dependent satellite cell activation and muscle regeneration. EMBO Rep. 15 (11), 1175– 1183. 10.15252/embr.201439195 25205686 PMC4253491 · DOI
  28. Choi S. Y. Kee H. J. Kurz T. Hansen F. K. Ryu Y. Kim G. R. (2016). Class I HDACs specifically regulate E-cadherin expression in human renal epithelial cells. J. Cell Mol. Med. 20 (12), 2289– 2298. 10.1111/jcmm.12919 27420561 PMC5134402 · DOI
  29. Clocchiatti A. Di Giorgio E. Viviani G. Streuli C. Sgorbissa A. Picco R. (2015). The MEF2-HDAC axis controls proliferation of mammary epithelial cells and acini formation in vitro. J. Cell Sci. 128 (21), 3961– 3976. 10.1242/jcs.170357 26403201 · DOI
  30. Clocchiatti A. Di Giorgio E. Demarchi F. Brancolini C. (2013). Beside the MEF2 axis: Unconventional functions of HDAC4. Cell Signal 25 (1), 269– 276. 10.1016/j.cellsig.2012.10.002 23063464 · DOI
  31. Cutano V. Di Giorgio E. Minisini M. Picco R. Dalla E. Brancolini C. (2019). HDAC7-mediated control of tumour microenvironment maintains proliferative and stemness competence of human mammary epithelial cells. Mol. Oncol. 13 (8), 1651– 1668. 10.1002/1878-0261.12503 31081251 PMC6670296 · DOI · Paper page
  32. Darling N. J. Cohen P. (2021). Nuts and bolts of the salt-inducible kinases (SIKs). Biochem. J. 478 (7), 1377– 1397. 10.1042/BCJ20200502 33861845 PMC8057676 · DOI
  33. Datta J. Kutay H. Nasser M. W. Nuovo G. J. Wang B. Majumder S. (2008). Methylation mediated silencing of microRNA-1 gene and its role in hepatocellular carcinogenesis. Cancer Res. 68 (13), 5049– 5058. 10.1158/0008-5472.CAN-07-6655 18593903 PMC2562630 · DOI
  34. Davila J. L. Goff L. A. Ricupero C. L. Camarillo C. Oni E. N. Swerdel M. R. (2014). A positive feedback mechanism that regulates expression of miR-9 during neurogenesis. PLoS One 9 (4), e94348. 10.1371/journal.pone.0094348 24714615 PMC3979806 · DOI
  35. Dehennaut V. Loison I. Dubuissez M. Nassour J. Abbadie C. Leprince D. (2013). DNA double-strand breaks lead to activation of hypermethylated in cancer 1 (HIC1) by SUMOylation to regulate DNA repair. J. Biol. Chem. 288 (15), 10254– 10264. 10.1074/jbc.M112.421610 23417673 PMC3624409 · DOI
  36. Demaria M. O'Leary M. N. Chang J. Shao L. Liu S. Alimirah F. (2017). Cellular senescence promotes adverse effects of chemotherapy and cancer relapse. Cancer Discov. 7 (2), 165– 176. 10.1158/2159-8290.CD-16-0241 27979832 PMC5296251 · DOI · Paper page
  37. Dequiedt F. Martin M. Von Blume J. Vertommen D. Lecomte E. Mari N. (2006). New role for hPar-1 kinases EMK and C-TAK1 in regulating localization and activity of class IIa histone deacetylases. Mol. Cell Biol. 26 (19), 7086– 7102. 10.1128/MCB.00231-06 16980613 PMC1592903 · DOI
  38. Di Giorgio E. Brancolini C. (2016). Regulation of class IIa HDAC activities: It is not only matter of subcellular localization. Epigenomics 8 (2), 251– 269. 10.2217/epi.15.106 26791815 · DOI
  39. Di Giorgio E. Clocchiatti A. Piccinin S. Sgorbissa A. Viviani G. Peruzzo P. (2013). MEF2 is a converging hub for histone deacetylase 4 and phosphatidylinositol 3-kinase/Akt-induced transformation. Mol. Cell Biol. 33 (22), 4473– 4491. 10.1128/MCB.01050-13 24043307 PMC3838174 · DOI
  40. Di Giorgio E. Dalla E. Franforte E. Paluvai H. Minisini M. Trevisanut M. (2020). Different class IIa HDACs repressive complexes regulate specific epigenetic responses related to cell survival in leiomyosarcoma cells. Nucleic Acids Res. 48 (2), 646– 664. 10.1093/nar/gkz1120 31754707 PMC6954409 · DOI
  41. Di Giorgio E. Franforte E. Cefalù S. Rossi S. Dei Tos A. P. Brenca M. (2017). The co-existence of transcriptional activator and transcriptional repressor MEF2 complexes influences tumor aggressiveness. PLoS Genet. 13 (4), e1006752. 10.1371/journal.pgen.1006752 28419090 PMC5413110 · DOI
  42. Di Giorgio E. Gagliostro E. Brancolini C. (2015). Selective class IIa HDAC inhibitors: Myth or reality. Cell Mol. Life Sci. 72 (1), 73– 86. 10.1007/s00018-014-1727-8 25189628 PMC11113455 · DOI
  43. Di Giorgio E. Hancock W. W. Brancolini C. (2018). MEF2 and the tumorigenic process, hic sunt leones. Biochim. Biophys. Acta Rev. Cancer 1870 (2), 261– 273. 10.1016/j.bbcan.2018.05.007 29879430 · DOI
  44. Di Giorgio E. Paluvai H. Dalla E. Ranzino L. Renzini A. Moresi V. (2021). HDAC4 degradation during senescence unleashes an epigenetic program driven by AP-1/p300 at selected enhancers and super-enhancers. Genome Biol. 22 (1), 129. 10.1186/s13059-021-02340-z 33966634 PMC8108360 · DOI
  45. Ding Y. Xing D. Fei Y. Lu B. (2022). Emerging degrader technologies engaging lysosomal pathways. Chem. Soc. Rev. 51 (21), 8832– 8876. 10.1039/d2cs00624c 36218065 PMC9620493 · DOI
  46. Doddi S. K. Kummari G. Jagannadham M. V. Kalle A. M. (2019). Protein kinase A mediates novel serine-584 phosphorylation of HDAC4. Biochem. Cell Biol. 97 (5), 526– 535. 10.1139/bcb-2018-0208 30661366 · DOI
  47. Du J. Zhang L. Zhuang S. Qin G. J. Zhao T. C. (2015). HDAC4 degradation mediates HDAC inhibition-induced protective effects against hypoxia/reoxygenation injury. J. Cell Physiol. 230 (6), 1321– 1331. 10.1002/jcp.24871 25475100 PMC4373665 · DOI
  48. Duan Z. Choy E. Nielsen G. P. Rosenber A. Iafrate J. Yang C. (2010). Differential expression of microRNA (miRNA) in chordoma reveals a role for miRNA-1 in Met expression. J. Orthop. Res. 28 (6), 746– 752. 10.1002/jor.21055 20041488 · DOI
  49. Fan Q. Li L. Wang T. L. Emerson R. E. Xu Y. (2021). A novel ZIP4-HDAC4-VEGFA Axis in high-grade serous ovarian cancer. Cancers (Basel) 13 (15), 3821. 10.3390/cancers13153821 34359722 PMC8345154 · DOI
  50. Feng S. Zhang L. Liu X. Li G. Zhang B. Wang Z. (2020). Low levels of AMPK promote epithelial-mesenchymal transition in lung cancer primarily through HDAC4- and HDAC5-mediated metabolic reprogramming. J. Cell Mol. Med. 24 (14), 7789– 7801. 10.1111/jcmm.15410 32519437 PMC7348170 · DOI · Paper page
  51. Feng Y. Wang X. Xu L. Pan H. Zhu S. Liang Q. (2009). The transcription factor ZBP-89 suppresses p16 expression through a histone modification mechanism to affect cell senescence. FEBS J. 276 (15), 4197– 4206. 10.1111/j.1742-4658.2009.07128.x 19583777 · DOI
  52. Finke D. Schanze L. M. Schreiter F. Kreußer M. M. Katus H. A. Backs J. (2022). Histone deacetylase 4 deletion broadly affects cardiac epigenetic repression and regulates transcriptional susceptibility via H3K9 methylation. J. Mol. Cell Cardiol. 162, 119– 129. 10.1016/j.yjmcc.2021.09.001 34492228 · DOI
  53. Fischer C. Leithner K. Wohlkoenig C. Quehenberger F. Bertsch A. Olschewski A. (2015). Panobinostat reduces hypoxia-induced cisplatin resistance of non-small cell lung carcinoma cells via HIF-1α destabilization. Mol. Cancer 14, 4. 10.1186/1476-4598-14-4 25608569 PMC4320451 · DOI
  54. Franklin K. A. Shields C. E. Haynes K. A. (2022). Beyond the marks: Reader-effectors as drivers of epigenetics and chromatin engineering. Trends Biochem. Sci. 47 (5), 417– 432. 10.1016/j.tibs.2022.03.002 35427480 PMC9074927 · DOI
  55. Geng H. Harvey C. T. Pittsenbarger J. Liu Q. Beer T. M. Xue C. (2011). HDAC4 protein regulates HIF1α protein lysine acetylation and cancer cell response to hypoxia. J. Biol. Chem. 286 (44), 38095– 38102. 10.1074/jbc.M111.257055 21917920 PMC3207467 · DOI
  56. Gil V. S. Bhagat G. Howell L. Zhang J. Kim C. H. Stengel S. (2016). Deregulated expression of HDAC9 in B cells promotes development of lymphoproliferative disease and lymphoma in mice. Dis. Model Mech. 9 (12), 1483– 1495. 10.1242/dmm.023366 27799148 PMC5200892 · DOI
  57. Greco T. M. Yu F. Guise A. J. Cristea I. M. (2010). Nuclear import of histone deacetylase 5 by requisite nuclear localization signal phosphorylation. Mol. Cell Proteomics 10 (2), M110.004317. 10.1074/mcp.M110.004317 PMC3033682 21081666 · DOI
  58. Grégoire S. Tremblay A. M. Xiao L. Yang Q. Ma K. Nie J. (2006). Control of MEF2 transcriptional activity by coordinated phosphorylation and sumoylation. J. Biol. Chem. 281 (7), 4423– 4433. 10.1074/jbc.M509471200 16356933 · DOI
  59. Griffin E. A. Jr Melas P. A. Zhou R. Li Y. Mercado P. Kempadoo K. A. (2017). Prior alcohol use enhances vulnerability to compulsive cocaine self-administration by promoting degradation of HDAC4 and HDAC5. Sci. Adv. 3 (11), e1701682. 10.1126/sciadv.1701682 29109977 PMC5665598 · DOI
  60. Grozinger C. M. Schreiber S. L. (2000). Regulation of histone deacetylase 4 and 5 and transcriptional activity by 14-3-3-dependent cellular localization. Proc. Natl. Acad. Sci. U. S. A. 97 (14), 7835– 7840. 10.1073/pnas.140199597 10869435 PMC16631 · DOI
  61. Guan Y. J. Yang X. Wei L. Chen Q. (2011). MiR-365: A mechanosensitive microRNA stimulates chondrocyte differentiation through targeting histone deacetylase 4. Faseb J. 25 (12), 4457– 4466. 10.1096/fj.11-185132 21856783 PMC3236620 · DOI
  62. Guenther M. G. Barak O. Lazar M. A. (2001). The SMRT and N-CoR corepressors are activating cofactors for histone deacetylase 3. Mol. Cell Biol. 21 (18), 6091– 6101. 10.1128/MCB.21.18.6091-6101.2001 11509652 PMC87326 · DOI · Paper page
  63. Guise A. J. Greco T. M. Zhang I. Y. Yu F. Cristea I. M. (2012). Aurora B-dependent regulation of class IIa histone deacetylases by mitotic nuclear localization signal phosphorylation. Mol. Cell Proteomics 11 (11), 1220– 1229. 10.1074/mcp.M112.021030 22865920 PMC3494195 · DOI
  64. Guo L. Han A. Bates D. L. Cao J. Chen L. (2007). Crystal structure of a conserved N-terminal domain of histone deacetylase 4 reveals functional insights into glutamine-rich domains. Proc. Natl. Acad. Sci. U. S. A. 104 (11), 4297– 4302. 10.1073/pnas.0608041104 17360518 PMC1838596 · DOI · Paper page
  65. Ha N. Sun J. Bian Q. Wu D. Wang X. (2022). Hdac4 regulates the proliferation of neural crest-derived osteoblasts during murine craniofacial development. Front. Physiol. 13, 819619. 10.3389/fphys.2022.819619 35242053 PMC8886889 · DOI
  66. Han K. Gennarino V. A. Lee Y. Pang K. Hashimoto-Torii K. Choufani S. (2013). Human-specific regulation of MeCP2 levels in fetal brains by microRNA miR-483-5p. Genes Dev. 27 (5), 485– 490. 10.1101/gad.207456.112 23431031 PMC3605462 · DOI
  67. Hanahan D. (2022). Hallmarks of cancer: New dimensions. Cancer Discov. 12 (1), 31– 46. 10.1158/2159-8290.CD-21-1059 35022204 · DOI · Paper page
  68. HanNiu X, J. Zhao Y. Kong Q. Tong T. Han L. (2016). HDAC4 stabilizes SIRT1 via sumoylation SIRT1 to delay cellular senescence. Clin. Exp. Pharmacol. Physiol. 43 (1), 41– 46. 10.1111/1440-1681.12496 26414199 · DOI
  69. Helmstadter K. G. Ljubojevic-Holzer S. Wood B. M. Taheri K. D. Sedej S. Erickson J. R. (2021). CaMKII and PKA-dependent phosphorylation co-regulate nuclear localization of HDAC4 in adult cardiomyocytes. Basic Res. Cardiol. 116 (1), 11. 10.1007/s00395-021-00850-2 33590335 PMC7884572 · DOI
  70. Hnisz D. Shrinivas K. Young R. A. Chakraborty A. K. Sharp P. A. (2017). A phase separation model for transcriptional control. Cell 169 (1), 13– 23. 10.1016/j.cell.2017.02.007 28340338 PMC5432200 · DOI · Paper page
  71. Hohl M. Wagner M. Reil J. C. Müller S. A. Tauchnitz M. Zimmer A. M. (2013). HDAC4 controls histone methylation in response to elevated cardiac load. J. Clin. Invest. 123 (3), 1359– 1370. 10.1172/JCI61084 23434587 PMC3582114 · DOI
  72. Hosokawa H. Rothenberg E. V. (2021). How transcription factors drive choice of the T cell fate. Nat. Rev. Immunol. 21 (3), 162– 176. 10.1038/s41577-020-00426-6 2doi: 32918063 PMC7933071 · DOI
  73. Hsieh T. H. Hsu C. Y. Tsai C. F. Long C. Y. Chai C. Y. Hou M. F. (2015). MiR-125a-5p is a prognostic biomarker that targets HDAC4 to suppress breast tumorigenesis. Oncotarget 6 (1), 494– 509. 10.18632/oncotarget.2674 25504437 PMC4381610 · DOI
  74. Hu Y. French S. W. Chau T. Liu H. X. Sheng L. Wei F. (2019). RARβ acts as both an upstream regulator and downstream effector of miR-22, which epigenetically regulates NUR77 to induce apoptosis of colon cancer cells. Faseb J. 33 (2), 2314– 2326. 10.1096/fj.201801390R 30252536 PMC6338632 · DOI
  75. Huang A. Garraway L. A. Ashworth A. Weber B. (2020). Synthetic lethality as an engine for cancer drug target discovery. Nat. Rev. Drug Discov. 19 (1), 23– 38. 10.1038/s41573-019-0046-z 31712683 · DOI
  76. Huang Z. P. Chen J. Seok H. Y. Zhang Z. Kataoka M. Hu X. (2013). MicroRNA-22 regulates cardiac hypertrophy and remodeling in response to stress. Circ. Res. 112 (9), 1234– 1243. 10.1161/CIRCRESAHA.112.300682 23524588 PMC3720677 · DOI
  77. Hudson G. M. Watson P. J. Fairall L. Jamieson A. G. Schwabe J. W. R. (2015). Insights into the recruitment of class IIa histone deacetylases (HDACs) to the SMRT/NCoR transcriptional repression complex. J. Biol. Chem. 290 (29), 18237– 18244. 10.1074/jbc.M115.661058 26055705 PMC4505066 · DOI
  78. Jebessa Z. H. Shanmukha K. D. Dewenter M. Lehmann L. H. Xu C. Schreiter F. (2019). The lipid droplet-associated protein ABHD5 protects the heart through proteolysis of HDAC4. Nat. Metab. 1 (11), 1157– 1167. 10.1038/s42255-019-0138-4 31742248 PMC6861130 · DOI
  79. Jiang H. Jia D. Zhang B. Yang W. Dong Z. Sun X. (2020). Exercise improves cardiac function and glucose metabolism in mice with experimental myocardial infarction through inhibiting HDAC4 and upregulating GLUT1 expression. Basic Res. Cardiol. 115 (3), 28. 10.1007/s00395-020-0787-1 32236769 · DOI
  80. Jovicic A. Zaldivar Jolissant J. F. Moser R. Silva Santos M. d. F. Luthi-Carter R. (2013). MicroRNA-22 (miR-22) overexpression is neuroprotective via general anti-apoptotic effects and may also target specific Huntington's disease-related mechanisms. PLoS One 8 (1), e54222. 10.1371/journal.pone.0054222 23349832 PMC3547907 · DOI
  81. Kalaora S. Nagler A. Wargo J. A. Samuels Y. (2022). Mechanisms of immune activation and regulation: Lessons from melanoma. Nat. Rev. Cancer 22 (4), 195– 207. 10.1038/s41568-022-00442-9 35105962 · DOI
  82. Kang Z. H. Wang C. Y. Zhang W. L. Zhang J. T. Yuan C. H. Zhao P. W. (2014). Histone deacetylase HDAC4 promotes gastric cancer SGC-7901 cells progression via p21 repression. PLoS One 9 (6), e98894. 10.1371/journal.pone.0098894 24896240 PMC4045860 · DOI
  83. Kikuchi S. Suzuki R. Ohguchi H. Yoshida Y. Lu D. Cottini F. (2015). Class IIa HDAC inhibition enhances ER stress-mediated cell death in multiple myeloma. Leukemia 29, 1918– 1927. 10.1038/leu.2015.83 25801913 · DOI
  84. Kim G. R. Cho S. N. Kim H. S. Yu S. Y. Choi S. Y. Ryu Y. (2016). Histone deacetylase and GATA-binding factor 6 regulate arterial remodeling in angiotensin II-induced hypertension. J. Hypertens. 34 (11), 2206– 2219. 10.1097/HJH.0000000000001081 27512969 · DOI
  85. Kim G. S. Jung H. E. Kim J. S. Lee Y. C. (2015). Mutagenesis study reveals the rim of catalytic entry site of HDAC4 and -5 as the major binding surface of SMRT corepressor. PLoS One 10 (7), e0132680. 10.1371/journal.pone.0132680 26161557 PMC4498904 · DOI
  86. Kirsh O. Seeler J. S. Pichler A. Gast A. Müller S. Miska E. (2002). The SUMO E3 ligase RanBP2 promotes modification of the HDAC4 deacetylase. EMBO J. 21 (11), 2682– 2691. 10.1093/emboj/21.11.2682 12032081 PMC125385 · DOI
  87. Klempner S. J. Fabrizio D. Bane S. Reinhart M. Peoples T. Ali S. M. (2020). Tumor mutational burden as a predictive biomarker for response to immune checkpoint inhibitors: A review of current evidence. Oncologist 25 (1), e147– e159. 10.1634/theoncologist.2019-0244 31578273 PMC6964127 · DOI
  88. Ko J. Y. Chuang P. C. Chen M. W. Ke H. C. Wu S. L. Chang Y. H. (2013). MicroRNA-29a ameliorates glucocorticoid-induced suppression of osteoblast differentiation by regulating β-catenin acetylation. Bone 57 (2), 468– 475. 10.1016/j.bone.2013.09.019 24096265 · DOI
  89. Kuehl W. M. Bergsagel P. L. (2012). Molecular pathogenesis of multiple myeloma and its premalignant precursor. J. Clin. Invest. 122 (10), 3456– 3463. 10.1172/JCI61188 23023717 PMC3461901 · DOI
  90. Kuznetsoff J. N. Owens D. A. Lopez A. Rodriguez D. A. Chee N. T. Kurtenbach S. (2021). Dual screen for efficacy and toxicity identifies HDAC inhibitor with distinctive activity spectrum for BAP1-mutant uveal melanoma. Mol. Cancer Res. 19 (2), 215– 222. 10.1158/1541-7786.MCR-20-0434 33077485 PMC7864865 · DOI
  91. Kuznetsov J. N. Aguero T. H. Owens D. A. Kurtenbach S. Field M. G. Durante M. A. (2019). BAP1 regulates epigenetic switch from pluripotency to differentiation in developmental lineages giving rise to BAP1-mutant cancers. Sci. Adv. 5 (9), eaax1738. 10.1126/sciadv.aax1738 31555735 PMC6750916 · DOI
  92. Lee B. S. Kim Y. S. Kim H. J. Kim D. H. Won H. R. Kim Y. S. (2018). HDAC4 degradation by combined TRAIL and valproic acid treatment induces apoptotic cell death of TRAIL-resistant head and neck cancer cells. Sci. Rep. 8 (1), 12520. 10.1038/s41598-018-31039-8 30131570 PMC6104079 · DOI
  93. Lee H. A. Song M. J. Seok Y. M. Kang S. H. Kim S. Y. Kim I. (2015). Histone deacetylase 3 and 4 complex stimulates the transcriptional activity of the mineralocorticoid receptor. PLoS One 10 (8), e0136801. 10.1371/journal.pone.0136801 26305553 PMC4549324 · DOI
  94. Lee Y. Song M. J. Park J. H. Shin M. H. Kim M. K. Hwang D. (2022). Histone deacetylase 4 reverses cellular senescence via DDIT4 in dermal fibroblasts. Aging (Albany NY) 14 (11), 4653– 4672. 10.18632/aging.204118 35680564 PMC9217707 · DOI
  95. Lensch S. Herschl M. H. Ludwig C. H. Sinha J. Hinks M. M. Mukund A. (2022). Dynamic spreading of chromatin-mediated gene silencing and reactivation between neighboring genes in single cells. Elife 11, e75115. 10.7554/eLife.75115 35678392 PMC9183234 · DOI
  96. Li J. Liu C. Li Y. Zheng Q. Xu Y. Liu B. (2019). TMCO1-mediated Ca2+ leak underlies osteoblast functions via CaMKII signaling. Nat. Commun. 10 (1), 1589. 10.1038/s41467-019-09653-5 30962442 PMC6453895 · DOI
  97. Li P. Wei X. Guan Y. Chen Q. Zhao T. Sun C. (2014). MicroRNA-1 regulates chondrocyte phenotype by repressing histone deacetylase 4 during growth plate development. Faseb J. 28 (9), 3930– 3941. 10.1096/fj.13-249318 24858276 PMC4139910 · DOI
  98. Li Z. Hassan M. Q. Jafferji M. Aqeilan R. I. Garzon R. Croce C. M. (2009). Biological functions of miR-29b contribute to positive regulation of osteoblast differentiation. J. Biol. Chem. 284 (23), 15676– 15684. 10.1074/jbc.M809787200 19342382 PMC2708864 · DOI
  99. Lin R. Elf S. Shan C. Kang H. B. Ji Q. Zhou L. (2015). 6-Phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumour growth by inhibiting LKB1-AMPK signalling. Nat. Cell Biol. 17 (11), 1484– 1496. 10.1038/ncb3255 26479318 PMC4628560 · DOI · Paper page
  100. Little G. H. Bai Y. Williams T. Poizat C. (2007). Nuclear calcium/calmodulin-dependent protein kinase IIdelta preferentially transmits signals to histone deacetylase 4 in cardiac cells. J. Biol. Chem. 282 (10), 7219– 7231. 10.1074/jbc.M604281200 17179159 · DOI
  101. Liu F. Dowling M. Yang X.-J. Kao G. D. (2004). Caspase-mediated specific cleavage of human histone deacetylase 4. J. Biol. Chem. 279 (33), 34537– 34549. 10.1074/jbc.M402475200 15205465 · DOI
  102. Liu D. Wu D. Zhao L. Yang Y. Ding J. Dong L. (2015). Arsenic trioxide reduces global histone H4 acetylation at lysine 16 through direct binding to histone acetyltransferase hMOF in human cells. PLoS One 10 (10), e0141014. 10.1371/journal.pone.0141014 26473953 PMC4608833 · DOI
  103. Liu R. Wang L. Chen G. Katoh H. Chen C. Liu Y. (2009). FOXP3 up-regulates p21 expression by site-specific inhibition of histone deacetylase 2/histone deacetylase 4 association to the locus. Cancer Res. 69 (6), 2252– 2259. 10.1158/0008-5472.CAN-08-3717 19276356 PMC2715174 · DOI
  104. Liu Y. Schneider M. F. (2013). Opposing HDAC4 nuclear fluxes due to phosphorylation by β-adrenergic activated protein kinase A or by activity or Epac activated CaMKII in skeletal muscle fibres. J. Physiol. 591 (14), 3605– 3623. 10.1113/jphysiol.2013.256263 23652597 PMC3731617 · DOI
  105. Lu J. McKinsey T. A. Zhang C. L. Olson E. N. (2000). Regulation of skeletal myogenesis by association of the MEF2 transcription factor with class II histone deacetylases. Mol. Cell 6 (2), 233– 244. 10.1016/s1097-2765(00)00025-3 10983972 · DOI
  106. Lu Y. Stuart J. H. Talbot-Cooper C. Agrawal-Singh S. Huntly B. Smid A. I. (2019). Histone deacetylase 4 promotes type I interferon signaling, restricts DNA viruses, and is degraded via vaccinia virus protein C6. Proc. Natl. Acad. Sci. U. S. A. 116 (24), 11997– 12006. 10.1073/pnas.1816399116 31127039 PMC6575207 · DOI
  107. Luan B. Goodarzi M. O. Phillips N. G. Guo X. Chen Y. D. Yao J. (2014). Leptin-mediated increases in catecholamine signaling reduce adipose tissue inflammation via activation of macrophage HDAC4. Cell Metab. 19 (6), 1058– 1065. 10.1016/j.cmet.2014.03.024 24768298 PMC4207085 · DOI
  108. Macabuag N. Esmieu W. Breccia P. Jarvis R. Blackaby W. Lazari O. (2022). Developing HDAC4-selective protein degraders to investigate the role of HDAC4 in huntington's disease pathology. J. Med. Chem. 65 (18), 12445– 12459. 10.1021/acs.jmedchem.2c01149 36098485 PMC9512014 · DOI
  109. Marampon F. Megiorni F. Camero S. Crescioli C. McDowell H. P. Sferra R. (2017). HDAC4 and HDAC6 sustain DNA double strand break repair and stem-like phenotype by promoting radioresistance in glioblastoma cells. Cancer Lett. 397, 1– 11. 10.1016/j.canlet.2017.03.028 28342984 · DOI
  110. Marroncelli N. Bianchi M. Bertin M. Consalvi S. Saccone V. De Bardi M. (2018). HDAC4 regulates satellite cell proliferation and differentiation by targeting P21 and Sharp1 genes. Sci. Rep. 8 (1), 3448. 10.1038/s41598-018-21835-7 29472596 PMC5823886 · DOI
  111. McKinsey T. A. Zhang C. L. Olson E. N. (2001). Identification of a signal-responsive nuclear export sequence in class II histone deacetylases. Mol. Cell Biol. 21 (18), 6312– 6321. 10.1128/MCB.21.18.6312-6321.2001 11509672 PMC87361 · DOI
  112. Menezes M. E. Bhatia S. Bhoopathi P. Das S. K. Emdad L. Dasgupta S. (2014). MDA-7/IL-24: Multifunctional cancer killing cytokine. Adv. Exp. Med. Biol. 818, 127– 153. 10.1007/978-1-4471-6458-6_6 25001534 PMC4633013 · DOI
  113. Mielcarek M. Zielonka D. Carnemolla A. Marcinkowski J. T. Guidez F. (2015). HDAC4 as a potential therapeutic target in neurodegenerative diseases: A summary of recent achievements. Front. Cell Neurosci. 9, 42. 10.3389/fncel.2015.00042 25759639 PMC4338808 · DOI
  114. Mihaylova M. M. Vasquez D. S. Ravnskjaer K. Denechaud P. D. Yu R. T. Alvarez J. G. (2011). Class IIa histone deacetylases are hormone-activated regulators of FOXO and mammalian glucose homeostasis. Cell 145 (4), 607– 621. 10.1016/j.cell.2011.03.043 21565617 PMC3117637 · DOI
  115. Minisini M. Di Giorgio E. Kerschbamer E. Dalla E. Faggiani M. Franforte E. (2022). Transcriptomic and genomic studies classify NKL54 as a histone deacetylase inhibitor with indirect influence on MEF2-dependent transcription. Nucleic Acids Res. 50 (5), 2566– 2586. 10.1093/nar/gkac081 35150567 PMC8934631 · DOI · Paper page
  116. Miska E. A. Karlsson C. Langley E. Nielsen S. J. Pines J. Kouzarides T. (1999). HDAC4 deacetylase associates with and represses the MEF2 transcription factor. EMBO J. 18 (18), 5099– 5107. 10.1093/emboj/18.18.5099 10487761 PMC1171580 · DOI
  117. Mottet D. Pirotte S. Lamour V. Hagedorn M. Javerzat S. Bikfalvi A. (2009). HDAC4 represses p21(WAF1/Cip1) expression in human cancer cells through a Sp1-dependent, p53-independent mechanism. Oncogene 28 (2), 243– 256. 10.1038/onc.2008.371 18850004 · DOI
  118. Nakatani T. Chen T. Partridge N. C. (2016). MMP-13 is one of the critical mediators of the effect of HDAC4 deletion on the skeleton. Bone. Sep. 90, 142– 151. 10.1016/j.bone.2016.06.010 PMC4970950 27320207 · DOI
  119. Nieto M. A. Huang R. Y. Jackson R. A. Thiery J. P. (2016). EMT: 2016. Cell 166 (1), 21– 45. 10.1016/j.cell.2016.06.028 27368099 · DOI · Paper page
  120. Nishida N. Mimori K. Fabbri M. Yokobori T. Sudo T. Tanaka F. (2011). MicroRNA-125a-5p is an independent prognostic factor in gastric cancer and inhibits the proliferation of human gastric cancer cells in combination with trastuzumab. Clin. Cancer Res. 17 (9), 2725– 2733. 10.1158/1078-0432.CCR-10-2132 21220473 · DOI
  121. Niu Y. Wang T. Liu S. Yuan H. Li H. Fu L. (2017). Exercise-induced GLUT4 transcription via inactivation of HDAC4/5 in mouse skeletal muscle in an AMPKα2-dependent manner. Biochim. Biophys. Acta Mol. Basis Dis. 1863 (9), 2372– 2381. 10.1016/j.bbadis.2017.07.001 28688716 · DOI
  122. Obri A. Makinistoglu M. P. Zhang H. Karsenty G. (2014). HDAC4 integrates PTH and sympathetic signaling in osteoblasts. J. Cell Biol. 205 (6), 771– 780. 10.1083/jcb.201403138 24934156 PMC4068141 · DOI
  123. Osanai T. Tanaka M. Mikami K. Kitajima M. Tomisawa T. Magota K. (2018). Novel anti-aging gene NM_026333 contributes to proton-induced aging via NCX1-pathway. J. Mol. Cell Cardiol. 125, 174– 184. 10.1016/j.yjmcc.2018.10.021 30385152 · DOI
  124. Ozcan L. Ghorpade D. S. Zheng Z. de Souza J. C. Chen K. Bessler M. (2016). Hepatocyte DACH1 is increased in obesity via nuclear exclusion of HDAC4 and promotes hepatic insulin resistance. Cell Rep. 15 (10), 2214– 2225. 10.1016/j.celrep.2016.05.006 27239042 PMC5068925 · DOI
  125. Pablo Tortola C. Fielitz B. Li Y. Rüdebusch J. Luft F. C. Fielitz J. (2021). Activation of tripartite motif containing 63 expression by transcription factor EB and transcription factor binding to immunoglobulin heavy chain enhancer 3 is regulated by protein kinase D and class IIa histone deacetylases. Front. Physiol. 11, 550506. 10.3389/fphys.2020.550506 33519497 PMC7838639 · DOI
  126. Paluvai H. Di Giorgio E. Brancolini C. (2018). Unscheduled HDAC4 repressive activity in human fibroblasts triggers TP53-dependent senescence and favors cell transformation. Mol. Oncol. 12 (12), 2165– 2181. 10.1002/1878-0261.12392 30315623 PMC6275271 · DOI
  127. Pan L. Pan H. Jiang H. Du J. Wang X. Huang B. (2010). HDAC4 inhibits the transcriptional activation of mda-7/IL-24 induced by Sp1. Cell Mol. Immunol. 7 (3), 221– 226. 10.1038/cmi.2010.12 20383178 PMC4002910 · DOI
  128. Park S. Y. Kim G. S. Hwang H. J. Nam T. H. Park H. S. Song J. (2018). Structural basis of the specific interaction of SMRT corepressor with histone deacetylase 4. Nucleic Acids Res. 46 (22), 11776– 11788. 10.1093/nar/gky926 30321390 PMC6294515 · DOI
  129. Paroni G. Mizzau M. Henderson C. Del Sal G. Schneider C. Brancolini C. (2018). Caspase-dependent regulation of histone deacetylase 4 nuclear-cytoplasmic shuttling promotes apoptosis. Mol. Biol. Cell 15 (6), 2804– 2818. 10.1091/mbc.e03-08-0624 PMC420104 15075374 · DOI
  130. Paroni G. Fontanini A. Cernotta N. Foti C. Gupta M. P. Yang X. J. (2007). Dephosphorylation and caspase processing generate distinct nuclear pools of histone deacetylase 4. Mol. Cell Biol. 27 (19), 6718– 6732. 10.1128/MCB.00853-07 17636017 PMC2099224 · DOI
  131. Parra M. Verdin E. (2010). Regulatory signal transduction pathways for class IIa histone deacetylases. Curr. Opin. Pharmacol. 10 (4), 454– 460. 10.1016/j.coph.2010.04.004 20447866 · DOI
  132. Pei X. F. Cao L. L. Huang F. Qiao X. Yu J. Ye H. (2018). Role of miR-22 in intestinal mucosa tissues and peripheral blood CD4+ T cells of inflammatory bowel disease. Pathol. Res. Pract. 214 (8), 1095– 1104. 10.1016/j.prp.2018.04.009 29880327 · DOI
  133. Peng T. Ji D. Jiang Y. (2021). Long non-coding RNA GAS5 suppresses rheumatoid arthritis progression via miR-128-3p/HDAC4 axis. Mol. Cell Biochem. 476 (6), 2491– 2501. 10.1007/s11010-021-04098-1 33611674 · DOI
  134. Peruzzo P. Comelli M. Di Giorgio. E. Franforte E. Mavelli I. Brancolini C. (2016). Transformation by different oncogenes relies on specific metabolic adaptations. Cell Cycle 15 (19), 2656– 2668. 10.1080/15384101.2016.1215387 27485932 PMC5053564 · DOI
  135. Pigna E. Renzini A. Greco E. Simonazzi E. Fulle S. Mancinelli R. (2018). HDAC4 preserves skeletal muscle structure following long-term denervation by mediating distinct cellular responses. Skelet. Muscle 8 (1), 6. 10.1186/s13395-018-0153-2 29477142 PMC6389241 · DOI
  136. Potthoff M. J. Wu H. Arnold M. A. Shelton J. M. Backs J. McAnally J. (2007). Histone deacetylase degradation and MEF2 activation promote the formation of slow-twitch myofibers. J. Clin. Invest. 117 (9), 2459– 2467. 10.1172/JCI31960 17786239 PMC1957540 · DOI
  137. Qian D. Z. Kachhap S. K. Collis S. J. Verheul H. M. Carducci M. A. Atadja P. (2006). Class II histone deacetylases are associated with VHL-independent regulation of hypoxia-inducible factor 1 alpha. Cancer Res. 66 (17), 8814– 8821. 10.1158/0008-5472.CAN-05-4598 16951198 · DOI
  138. Rad R. Rad L. Wang W. Cadinanos J. Vassiliou G. Rice S. (2010). PiggyBac transposon mutagenesis: A tool for cancer gene discovery in mice. Science 330 (6007), 1104– 1107. 10.1126/science.1193004 20947725 PMC3719098 · DOI
  139. Ren J. Huang H. J. Gong Y. Yue S. Tang L. M. Cheng S. Y. (2014). MicroRNA-206 suppresses gastric cancer cell growth and metastasis. Cell Biosci. 4, 26. 10.1186/2045-3701-4-26 24855559 PMC4030529 · DOI
  140. Renzini A. Marroncelli N. Cavioli G. Di Francescantonio S. Forcina L. Lambridis A. (2022). Cytoplasmic HDAC4 regulates the membrane repair mechanism in Duchenne muscular dystrophy. J. Cachexia Sarcopenia Muscle 13 (2), 1339– 1359. 10.1002/jcsm.12891 35170869 PMC8977968 · DOI
  141. Roccaro A. M. Sacco A. Jia X. Azab A. K. Maiso P. Ngo H. T. (2010). microRNA-dependent modulation of histone acetylation in Waldenstrom macroglobulinemia. Blood 116 (9), 1506– 1514. 10.1182/blood-2010-01-265686 20519629 PMC2938840 · DOI
  142. Rosenbloom K. R. Dreszer T. R. Pheasant M. Barber G. P. Meyer L. R. Pohl A. (2009). ENCODE whole-genome data in the UCSC Genome Browser. Nucleic Acids Res. 38, D620– D625. 10.1093/nar/gkp961 19920125 PMC2808953 · DOI
  143. Sakamoto K. Bultot L. Göransson O. (2018). The salt-inducible kinases: Emerging metabolic regulators. Trends Endocrinol. Metab. 29 (12), 827– 840. 10.1016/j.tem.2018.09.007 30385008 · DOI
  144. Salmena L. Poliseno L. Tay Y. Kats L. Pandolfi P. P. (2011). A ceRNA hypothesis: The rosetta stone of a hidden RNA language? Cell 146 (3), 353– 358. 10.1016/j.cell.2011.07.014 21802130 PMC3235919 · DOI · Paper page
  145. Salminen A. Kauppinen A. Kaarniranta K. (2016). AMPK/Snf1 signaling regulates histone acetylation: Impact on gene expression and epigenetic functions. Cell Signal 28 (8), 887– 895. 10.1016/j.cellsig.2016.03.009 27010499 · DOI
  146. Sandhu S. K. Volinia S. Costinean S. Galasso M. Neinast R. Santhanam R. (2012). miR-155 targets histone deacetylase 4 (HDAC4) and impairs transcriptional activity of B-cell lymphoma 6 (BCL6) in the Eμ-miR-155 transgenic mouse model. Proc. Natl. Acad. Sci. U. S. A. 109 (49), 20047– 20052. d oi:. 10.1073/pnas.1213764109 23169640 PMC3523868 · DOI
  147. Sato T. Verma S. Andrade C. D. C. Omeara M. Campbell N. Wang J. S. (2020). A FAK/HDAC5 signaling axis controls osteocyte mechanotransduction. Nat. Commun. 11 (1), 3282. 10.1038/s41467-020-17099-3 32612176 PMC7329900 · DOI · Paper page
  148. Saxton R. A. Sabatini D. M. (2017). mTOR signaling in growth, metabolism, and disease. Cell 168 (6), 960– 976. 10.1016/j.cell.2017.02.004 28283069 PMC5394987 · DOI · Paper page
  149. Schader T. Löwe O. Reschke C. Malacarne P. Hahner F. Müller N. (2020). Oxidation of HDAC4 by Nox4-derived H2O2 maintains tube formation by endothelial cells. Redox Biol. 36, 101669. 10.1016/j.redox.2020.101669 32818796 PMC7452117 · DOI
  150. Semenza G. L. (2012). Hypoxia-inducible factors in physiology and medicine. Cell 148 (3), 399– 408. 10.1016/j.cell.2012.01.021 22304911 PMC3437543 · DOI · Paper page
  151. Semenza G. L. (2016). Hypoxia-inducible factors: Coupling glucose metabolism and redox regulation with induction of the breast cancer stem cell phenotype. EMBO J. 36 (3), 252– 259. 10.15252/embj.201695204 28007895 PMC5286373 · DOI
  152. Seo H. W. Kim E. J. Na H. Lee M. O. (2009). Transcriptional activation of hypoxia-inducible factor-1alpha by HDAC4 and HDAC5 involves differential recruitment of p300 and FIH-1. FEBS Lett. 583 (1), 55– 60. 10.1016/j.febslet.2008.11.044 19071119 · DOI
  153. Shah S. P. Lonial S. Boise L. H. (2015). When cancer fights back: Multiple myeloma, proteasome inhibition, and the heat-shock response. Mol. Cancer Res. 13 (8), 1163– 1173. 10.1158/1541-7786.MCR-15-0135 26013169 PMC4874259 · DOI
  154. Shan C. Elf S. Ji Q. Kang H. B. Zhou L. Hitosugi T. (2014). Lysine acetylation activates 6-phosphogluconate dehydrogenase to promote tumor growth. Mol. Cell 55 (4), 552– 565. 10.1016/j.molcel.2014.06.020 25042803 PMC4142084 · DOI
  155. Shimizu E. Nakatani T. He Z. Partridge N. C. (2014). Parathyroid hormone regulates histone deacetylase (HDAC) 4 through protein kinase A-mediated phosphorylation and dephosphorylation in osteoblastic cells. J. Biol. Chem. 289 (31), 21340– 21350. 10.1074/jbc.M114.550699 24904057 PMC4118099 · DOI
  156. Singh A. Happel C. Manna S. K. Acquaah-Mensah G. Carrerero J. Kumar S. (2013). Transcription factor NRF2 regulates miR-1 and miR-206 to drive tumorigenesis. J. Clin. Invest. 123 (7), 2921– 2934. 10.1172/JCI66353 23921124 PMC3696551 · DOI · Paper page
  157. Sinnett-Smith J. Ni Y. Wang J. Ming M. Young S. H. Rozengurt E. (2014). Protein kinase D1 mediates class IIa histone deacetylase phosphorylation and nuclear extrusion in intestinal epithelial cells: Role in mitogenic signaling. Am. J. Physiol. Cell Physiol. 306 (10), C961– C971. 10.1152/ajpcell.00048.2014 24647541 PMC4024715 · DOI
  158. Song B. Wang Y. Xi Y. Kudo K. Bruheim S. Botchkina G. I. (2009). Mechanism of chemoresistance mediated by miR-140 in human osteosarcoma and colon cancer cells. Oncogene 28 (46), 4065– 4074. 10.1038/onc.2009.274 19734943 PMC2783211 · DOI
  159. Sparrow D. B. Miska E. A. Langley E. Reynaud-Deonauth S. Kotecha S. Towers N. (1999). MEF-2 function is modified by a novel co-repressor, MITR. EMBO J. 18 (18), 5085– 5098. 10.1093/emboj/18.18.5085 10487760 PMC1171579 · DOI · Paper page
  160. Su L. Luo Y. Yang Z. Yang J. Yao C. Cheng F. (2016). MEF2D transduces microenvironment stimuli to ZEB1 to promote epithelial-mesenchymal transition and metastasis in colorectal cancer. Cancer Res. 76 (17), 5054– 5067. 10.1158/0008-5472.CAN-16-0246 27364559 · DOI
  161. Sun Y. Ge Y. Drnevich J. Zhao Y. Band M. Chen J. (2010). Mammalian target of rapamycin regulates miRNA-1 and follistatin in skeletal myogenesis. J. Cell Biol. 189 (7), 1157– 1169. 10.1083/jcb.200912093 20566686 PMC2894448 · DOI
  162. Szklarczyk D. Gable A. L. Nastou K. C. Lyon D. Kirsch R. Pyysalo S. (2021). The STRING database in 2021: Customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets. Nucleic Acids Res. 49 (D1), D605– D612. 10.1093/nar/gkaa1074 33237311 PMC7779004 · DOI · Paper page
  163. Tan X. Banerjee P. Liu X. Yu J. Lee S. Ahn Y. H. (2022). Transcriptional control of a collagen deposition and adhesion process that promotes lung adenocarcinoma growth and metastasis. JCI Insight 7 (1), e153948. 10.1172/jci.insight.153948 34874914 PMC8765047 · DOI
  164. Tarumoto Y. Lin S. Wang J. Milazzo J. P. Xu Y. Lu B. (2020). Salt-inducible kinase inhibition suppresses acute myeloid leukemia progression in vivo. Blood 135 (1), 56– 70. 10.1182/blood.2019001576 31697837 PMC6940199 · DOI
  165. Tarumoto Y. Lu B. Somerville T. D. D. Huang Y. H. Milazzo J. P. Wu X. S. (2018). LKB1, salt-inducible kinases, and MEF2C are linked dependencies in acute myeloid leukemia. Mol. Cell 69 (6), 1017– 1027. e6. 10.1016/j.molcel.2018.02.011 29526696 PMC5856641 · DOI
  166. Taylor M. V. Hughes S. M. (2017). Mef2 and the skeletal muscle differentiation program. Semin. Cell Dev. Biol. 72, 33– 44. 10.1016/j.semcdb.2017.11.020 29154822 · DOI
  167. Torchy M. P. Hamiche A. Klaholz B. P. (2015). Structure and function insights into the NuRD chromatin remodeling complex. Cell Mol. Life Sci. 72 (13), 2491– 2507. 10.1007/s00018-015-1880-8 25796366 PMC11114056 · DOI
  168. Tsai C. L. Liu W. L. Hsu F. M. Yang P. S. Yen R. F. Tzen K. Y. (2018). Targeting histone deacetylase 4/ubiquitin-conjugating enzyme 9 impairs DNA repair for radiosensitization of hepatocellular carcinoma cells in mice. Hepatology 67 (2), 586– 599. 10.1002/hep.29328 28646552 · DOI
  169. Vallabhapurapu S. D. Noothi S. K. Pullum D. A. Lawrie C. H. Pallapati R. Potluri V. (2015). Transcriptional repression by the HDAC4-RelB-p52 complex regulates multiple myeloma survival and growth. Nat. Commun. 6, 8428. 10.1038/ncomms9428 26455434 · DOI
  170. Valsecchi V. Boido M. De Amicis E. Piras A. Vercelli A. (2015). E xpression of muscle-specific MiRNA 206 in the progression of disease in a murine SMA model. PLoS One 0 (6), e0128560. 10.1371/journal.pone.0128560 PMC4450876 26030275 · DOI
  171. Vega R. B. Matsuda K. Oh J. Barbosa A. C. Yang X. Meadows E. (2004). Histone deacetylase 4 controls chondrocyte hypertrophy during skeletogenesis. Cell 119 (4), 555– 566. 10.1016/j.cell.2004.10.024 15537544 · DOI
  172. Velasco-Aviles S. Patel N. Casillas-Bajo A. Frutos-Rincón L. Velasco E. Gallar J. (2022). A genetic compensatory mechanism regulated by Jun and Mef2d modulates the expression of distinct class IIa Hdacs to ensure peripheral nerve myelination and repair. Elife 11, e72917. 10.7554/eLife.72917 35076395 PMC8853665 · DOI
  173. Veloso A. Martin M. Bruyr J. O'Grady T. Deroanne C. Mottet D. (2019). Dephosphorylation of HDAC4 by PP2A-Bδ unravels a new role for the HDAC4/MEF2 axis in myoblast fusion. Cell Death Dis. 10 (7), 512. 10.1038/s41419-019-1743-6 31273193 PMC6609635 · DOI
  174. Villavicencio-Lorini P. Klopocki E. Trimborn M. Koll R. Mundlos S. Horn D. (2013). Phenotypic variant of Brachydactyly-mental retardation syndrome in a family with an inherited interstitial 2q37.3 microdeletion including HDAC4. Eur. J. Hum. Genet. 21 (7), 743– 748. 10.1038/ejhg.2012.240 23188045 PMC3722943 · DOI
  175. Wakeling E. McEntagart M. Bruccoleri M. Shaw-Smith C. Stals K. L. Wakeling M. (2021). Missense substitutions at a conserved 14-3-3 binding site in HDAC4 cause a novel intellectual disability syndrome. HGG Adv. 14 (21), 100015. 10.1016/j.xhgg.2020.100015 PMC7841527 33537682 · DOI
  176. Walkinshaw D. R. Weist R. Kim G. W. You L. Xiao L. Nie J. (2013). The tumor suppressor kinase LKB1 activates the downstream kinases SIK2 and SIK3 to stimulate nuclear export of class IIa histone deacetylases. J. Biol. Chem. 288 (13), 9345– 9362. 10.1074/jbc.M113.456996 23393134 PMC3611005 · DOI
  177. Wang A. H. Kruhlak M. J. Wu J. Bertos N. R. Vezmar M. Posner B. I. (2000). Regulation of histone deacetylase 4 by binding of 14-3-3 proteins. Mol. Cell Biol. 20 (18), 6904– 6912. 10.1128/MCB.20.18.6904-6912.2000 10958686 PMC88766 · DOI
  178. Wang A. H. Yang X. J. (2001). Histone deacetylase 4 possesses intrinsic nuclear import and export signals. Mol. Cell Biol. 21 (17), 5992– 6005. 10.1128/MCB.21.17.5992-6005.2001 11486037 PMC87317 · DOI
  179. Wang B. Li D. Filkowski J. Rodriguez-Juarez R. Storozynsky Q. Malach M. (2018). A dual role of miR-22 modulated by RelA/p65 in resensitizing fulvestrant-resistant breast cancer cells to fulvestrant by targeting FOXP1 and HDAC4 and constitutive acetylation of p53 at Lys382. Oncogenesis 7 (7), 54. 10.1038/s41389-018-0063-5 30057418 PMC6064715 · DOI
  180. Wang B. Liu T. Y. Lai C. H. Rao Y. H. Choi M. C. Chi J. T. (2014). Glycolysis-dependent histone deacetylase 4 degradation regulates inflammatory cytokine production. Mol. Biol. Cell 25 (21), 3300– 3307. 10.1091/mbc.E13-12-0757 25187650 PMC4214777 · DOI
  181. Wang B. Moya N. Niessen S. Hoover H. Mihaylova M. M. Shaw R. J. (2011). A hormone-dependent module regulating energy balance. Cell 145 (4), 596– 606. 10.1016/j.cell.2011.04.013 21565616 PMC3129781 · DOI
  182. Wang F. Marshall C. B. Ikura M. (2013). Transcriptional/epigenetic regulator CBP/p300 in tumorigenesis: Structural and functional versatility in target recognition. Cell Mol. Life Sci. 70 (21), 3989– 4008. 10.1007/s00018-012-1254-4 23307074 PMC11113169 · DOI
  183. Wang W. Pan K. Chen Y. Huang C. Zhang X. (2012). The acetylation of transcription factor HBP1 by p300/CBP enhances p16INK4A expression. Nucleic Acids Res. 40 (3), 981– 995. 10.1093/nar/gkr818 21967847 PMC3273810 · DOI
  184. WangZ. Qin G. Zhao T. C. (2014). HDAC4: Mechanism of regulation and biological functions. Epigenomics 6 (1), 139– 150. 10.2217/epi.13.73 24579951 PMC4380265 · DOI · Paper page
  185. Wei X. Li H. Zhang B. Li C. Dong D. Lan X. (2016). miR-378a-3p promotes differentiation and inhibits proliferation of myoblasts by targeting HDAC4 in skeletal muscle development. RNA Biol. 13 (12), 1300– 1309. 10.1080/15476286.2016.1239008 27661135 PMC5207390 · DOI
  186. Wheeler P. G. Huang D. Dai Z. (2014). Haploinsufficiency of HDAC4 does not cause intellectual disability in all affected individuals. Am. J. Med. Genet. A 164A (7), 1826– 1829. 10.1002/ajmg.a.36542 24715439 · DOI
  187. White E. DiPaola R. S. (2009). The double-edged sword of autophagy modulation in cancer. Clin. Cancer Res. 15 (17), 5308– 5316. 10.1158/1078-0432.CCR-07-5023 19706824 PMC2737083 · DOI
  188. Williams A. H. Valdez G. Moresi V. Qi X. McAnally J. Elliot J. L. (2009). MicroRNA-206 delays ALS progression and promotes regeneration of neuromuscular synapses in mice. Science 326 (5959), 1549– 1554. 10.1126/science.1181046 20007902 PMC2796560 · DOI
  189. Williams S. R. Aldred M. A. Der Kaloustian V. M. Halal F. Gowans G. McLeod D. R. (2010). Haploinsufficiency of HDAC4 causes brachydactyly mental retardation syndrome, with brachydactyly type E, developmental delays, and behavioral problems. Am. J. Hum. Genet. 87 (2), 219– 228. 10.1016/j.ajhg.2010.07.011 20691407 PMC2917703 · DOI · Paper page
  190. Wilson A. J. Byun D. S. Nasser S. Murray L. B. Ayyanar K. Arango D. (2008). HDAC4 promotes growth of colon cancer cells via repression of p21. Mol. Biol. Cell 19 (10), 4062– 4075. 10.1091/mbc.e08-02-0139 18632985 PMC2555950 · DOI
  191. Winbanks C. E. Wang B. Beyer C. Koh P. White L. Kantharidis P. (2011). TGF-beta regulates miR-206 and miR-29 to control myogenic differentiation through regulation of HDAC4. J. Biol. Chem. 286 (16), 13805– 13814. 10.1074/jbc.M110.192625 21324893 PMC3077581 · DOI
  192. Wu H. Liu C. Yang Q. Xin C. Du J. Sun F. (2020). MIR145-3p promotes autophagy and enhances bortezomib sensitivity in multiple myeloma by targeting HDAC4. Autophagy 16 (4), 683– 697. 10.1080/15548627.2019.1635380 31242129 PMC7138223 · DOI
  193. Wu Y. Hou F. Wang X. Kong Q. Han X. Bai B. (2016). Aberrant expression of histone deacetylases 4 in cognitive disorders: Molecular mechanisms and a potential target. Front. Mol. Neurosci. 9, 114. 10.3389/fnmol.2016.00114 27847464 PMC5088184 · DOI
  194. Xiao L. Gong D. Liang L. Liang A. Liang H. Xu X. (2021). Inhibition of HDAC4 by GSK3β leads to downregulation of KLF5 and ASK1 and prevents the progression of intravertebral disc degeneration. Clin. Epigenetics 13 (1), 53. 10.1186/s13148-021-01005-9 33691773 PMC7948391 · DOI
  195. Xiao Q. Gan Y. Li Y. Fan L. Liu J. Lu P. (2021). MEF2A transcriptionally upregulates the expression of ZEB2 and CTNNB1 in colorectal cancer to promote tumor progression. Oncogene 40 (19), 3364– 3377. 10.1038/s41388-021-01774-w 33863999 PMC8116210 · DOI
  196. Xing T. Zhu J. Xian J. Li A. Wang X. Wang W. (2019). miRNA-548ah promotes the replication and expression of Hepatitis B virus by targeting histone deacetylase 4. Life Sci. 219, 199– 208. 10.1016/j.lfs.2018.12.057 30615846 · DOI
  197. Xu D. Gao Y. Hu N. Wu L. Chen Q. (2017). miR-365 ameliorates dexamethasone-induced suppression of osteogenesis in mc3t3-E1 cells by targeting HDAC4. Int. J. Mol. Sci. 18 (5), 977. 10.3390/ijms18050977 28471397 PMC5454890 · DOI
  198. Yang D. Xiao C. Long F. Su Z. Jia W. Qin M. (2018). HDAC4 regulates vascular inflammation via activation of autophagy. Cardiovasc Res. 114 (7), 1016– 1028. 10.1093/cvr/cvy051 29529137 · DOI
  199. Yang Q. Tang J. Xu C. Zhao H. Zhou Y. Wang Y. (2020). Histone deacetylase 4 inhibits NF-κB activation by facilitating IκBα sumoylation. J. Mol. Cell Biol. 12 (12), 933– 945. 10.1093/jmcb/mjaa043 32770227 PMC7948076 · DOI · Paper page
  200. Yim J. H. Baek J. H. Lee C. W. Kim M. J. Yun H. S. Hong E. H. (2013). Identification of HDAC4 as a target of γ-catenin that regulates the oncogenic K-Ras-mediated malignant phenotype of Rat2 cells. Biochem. Biophys. Res. Commun. 436 (3), 436– 442. 10.1016/j.bbrc.2013.05.122 23747726 · DOI

200 of 218 shown

Authors
Cuttini, E., Goi, C., Pellarin, E., Vida, R., & Brancolini, C.
Affiliations
University of Udine (IT)
Corresponding author
Brancolini, Claudio
Venue
Frontiers in Molecular Biosciences
Published
2023-01-24
Volume
10
Pages
1116660-1116660
ISSN
2296-889X (ISSN-L)
OpenAlex
W4317820239
Cited by
28
References
230
Citations by year
2026: 4 · 2025: 6 · 2024: 13 · 2023: 5
FWCI
0.74
Type
journal article
Language
en
Open access
Locations
  • Frontiers in Molecular Biosciences (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Institutional Research Information System (University of Udine) (submittedVersion, other-oa)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • Associazione Italiana per la Ricerca sul Cancro (IG 2021)
  • Interreg (ITAT1054)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Histone Deacetylase Inhibitors Research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
Keywords
HDAC4, histone deacetylase, class IIa HDACs, histone acetylation, epigenetic modifications, chromatin condensation, transcriptional repression, carcinogenesis, non-histone substrates

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review