The DOI matches its Crossref record; 37 of the 37 references it cites were found in a registry or an index.
Deep learning for neuroimaging: a validation study
Open accessAbstract
Deep learning methods have recently made notable advances in the tasks of classification and representation learning. These tasks are important for brain imaging and neuroscience discovery, making the methods attractive for porting to a neuroimager's toolbox. Success of these methods is, in part, explained by the flexibility of deep learning models. However, this flexibility makes the process of porting to new areas a difficult parameter optimization problem. In this work we demonstrate our results (and feasible parameter ranges) in application of deep learning methods to structural and functional brain imaging data. These methods include deep belief networks and their building block the restricted Boltzmann machine. We also describe a novel constraint-based approach to visualizing high dimensional data. We use it to analyze the effect of parameter choices on data transformations. Our results show that deep learning methods are able to learn physiologically important representations and detect latent relations in neuroimaging data.
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(2008) · Journal of Machine Learning Research · Cited by 33,051
The Elements of Statistical Learning
Hastie, T., Tibshirani, R., & Friedman, J. (2009) · Springer Series in Statistics · doi:10.1007/978-0-387-84858-7 · Cited by 25,970
The Elements of Statistical Learning
Hastie, T., Friedman, J., & Tibshirani, R. (2001) · Springer Series in Statistics · doi:10.1007/978-0-387-21606-5 · Cited by 24,162
Reducing the dimensionality of data with neural networks
Hinton, G. E., & Salakhutdinov, R. R. (2006) · Science · doi:10.1126/science.1127647 · Cited by 20,928
Self-citationA fast learning algorithm for deep belief nets
Hinton, G. E., Osindero, S., & Teh, Y.-W. (2006) · Neural Computation · doi:10.1162/neco.2006.18.7.1527 · Cited by 16,336
Nonlinear Dimensionality Reduction by Locally Linear Embedding
Roweis, S. T., & Saul, L. K. (2000) · Science · doi:10.1126/science.290.5500.2323 · Cited by 14,965
A Global Geometric Framework for Nonlinear Dimensionality Reduction
Tenenbaum, J. B., Silva, V. D., & Langford, J. C. (2000) · Science · doi:10.1126/science.290.5500.2319 · Cited by 13,585
A default mode of brain function
Raichle, M. E., MacLeod, A. M., Snyder, A. Z., Powers, W. J., Gusnard, D. A., & Shulman, G. L. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.98.2.676 · Cited by 12,190
AFNI: Software for analysis and visualization of functional magnetic resonance neuroimages
Cox, R. W. (1996) · Computers and Biomedical Research · doi:10.1006/cbmr.1996.0014 · Cited by 10,913
Functional connectivity in the motor cortex of resting human brain using echo‐planar mri
Biswal, B., Zerrin Yetkin, F., Haughton, V. M., & Hyde, J. S. (1995) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910340409 · Cited by 9,812
Cited by
A survey on deep learning in medical image analysis
Litjens, G., Kooi, T., Bejnordi, B. E., Setio, A. A. A., Ciompi, F., Ghafoorian, M., van der Laak, J. A. W. M., van Ginneken, B., & Sánchez, C. I. (2017) · Medical Image Analysis · doi:10.1016/j.media.2017.07.005 · Cited by 15,332
Deep learning in medical image analysis
Shen, D., Wu, G., & Suk, H.-I. (2017) · Annual Review of Biomedical Engineering · doi:10.1146/annurev-bioeng-071516-044442 · Cited by 4,968
Identification of autism spectrum disorder using deep learning and the ABIDE dataset
Heinsfeld, A. S., Franco, A. R., Craddock, R. C., Buchweitz, A., & Meneguzzi, F. (2018) · NeuroImage: Clinical · doi:10.1016/j.nicl.2017.08.017 · Cited by 1,016
Single subject prediction of brain disorders in neuroimaging: Promises and pitfalls
Arbabshirani, M. R., Plis, S., Sui, J., & Calhoun, V. D. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2016.02.079 · Cited by 912
Self-citationCole, J. H., Poudel, R. P. K., Tsagkrasoulis, D., Caan, M. W. A., Steves, C., Spector, T. D., & Montana, G. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.07.059 · Cited by 872
Metadata
- Authors
- Plis, S. M., Hjelm, D. R., Salakhutdinov, R., Allen, E. A., Bockholt, H. J., Long, J. D., Johnson, H. J., Paulsen, J. S., Turner, J. A., & Calhoun, V. D.
- Venue
- Frontiers in Neuroscience
- Publisher
- Frontiers Media SA
- Published
- 2014-08-20
- Volume
- 8
- Pages
- 229-229
- ISSN
- 1662-453X (ISSN-L)
- OpenAlex
- W1972498024
- Cited by
- 586
- References
- 37
- FWCI
- 15.49
- Type
- journal article
- Language
- en
- Open access
- gold
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- Plis, S. M., Hjelm, D. R., Salakhutdinov, R., Allen, E. A., Bockholt, H. J., Long, J. D., Johnson, H. J., Paulsen, J. S., Turner, J. A., & Calhoun, V. D. (2014). Deep learning for neuroimaging: a validation study. Frontiers in Neuroscience. https://doi.org/10.3389/fnins.2014.00229
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