Antimicrobial Resistance and Clonal Lineages of Escherichia coli from Food-Producing Animals

Global trends in antimicrobial use in food animals

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Rapid and Simple Determination of the Escherichia coli Phylogenetic Group

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The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity

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Antimicrobial Resistance in Escherichia coli

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Animals as sources of food-borne pathogens: a review

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The application of antibiotics in broiler production and the resulting antibiotic resistance in Escherichia coli: A global overview

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Pandemic lineages of extraintestinal pathogenic Escherichia coli

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Resistance in bacteria of the food chain: Epidemiology and control strategies

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Use of antimicrobials in food animals and impact of transmission of antimicrobial resistance on humans

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World Health Organization (WHO) guidelines on use of medically important antimicrobials in food-producing animals

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Patterns of antibiotic use in global pig production: A systematic review

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Antibiotics and Antibiotic Resistance Genes in Animal Manure – Consequences of Its Application in Agriculture

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A review on astringency and bitterness perception of tannins in wine

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Escherichia coli phylogenetic group determination and its application in the identification of the major animal source of fecal contamination

Carlos, C., Pires, M. M., Stoppe, N. C., Hachich, E. M., Sato, M. I. Z., Gomes, T. A. T., do Amaral, L. A., & Ottoboni, L. M. M. (2010) · BMC Microbiology · doi:10.1186/1471-2180-10-161 · Cited by 293 · see citing works

Escherichia coli as Commensal and Pathogenic Bacteria among Food-Producing Animals: Health Implications of Extended Spectrum β-Lactamase (ESBL) Production

Ramos, S., Silva, V., Dapkevicius, M. D. L. E., Caniça, M., Tejedor-Junco, M. T., Igrejas, G., & Poeta, P. (2020) · Animals · doi:10.3390/ani10122239 · Cited by 293 · see citing works

Characterization and rapid identification of phylogroup G in Escherichia coli , a lineage with high virulence and antibiotic resistance potential

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Impact of antibiotic use in the swine industry

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Antibiotic Stewardship in Food-producing Animals: Challenges, Progress, and Opportunities

Patel, S. J., Wellington, M., Shah, R. M., & Ferreira, M. J. (2020) · Clinical Therapeutics · doi:10.1016/j.clinthera.2020.07.004 · Cited by 212 · see citing works

Escherichia coli and urinary tract infections: the role of poultry-meat

Manges, A. R. (2015) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2015.11.010 · Cited by 210 · see citing works

Escherichia coli molecular phylogeny using the incongruence length difference test

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Antimicrobial Usage in Animal Production: A Review of the Literature with a Focus on Low- and Middle-Income Countries

Cương, N. V., Padungtod, P., Thwaites, G. E., & Carrique-Mas, J. J. (2018) · Antibiotics · doi:10.3390/antibiotics7030075 · Cited by 187 · see citing works

Detection and Characterization of ESBL-Producing Escherichia coli From Humans and Poultry in Ghana

Falgenhauer, L., Imirzalioglu, C., Oppong, K., Akenten, C. W., Hogan, B., Krumkamp, R., Poppert, S., Levermann, V., Schwengers, O., Sarpong, N., et al. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.03358 · Cited by 173 · see citing works

Antimicrobial Resistance and Food Animals: Influence of Livestock Environment on the Emergence and Dissemination of Antimicrobial Resistance

Vidović, N., & Vidović, S. (2020) · Antibiotics · doi:10.3390/antibiotics9020052 · Cited by 147 · see citing works

Critically important antibiotics: criteria and approaches for measuring and reducing their use in food animal agriculture

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Comparable High Rates of Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli in Birds of Prey from Germany and Mongolia

Guenther, S., Aschenbrenner, K., Stamm, I., Bethe, A., Semmler, T., Stubbe, A., Stubbe, M., Batsajkhan, N., Glupczynski, Y., Wieler, L. H., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0053039 · Cited by 136 · see citing works

Diversity in prevalence and characteristics of ESBL/pAmpC producing E. coli in food in Germany

Käsbohrer, A., Bakran-Lebl, K., Irrgang, A., Fischer, J., Kämpf, P., Schiffmann, A. P., Werckenthin, C., Busch, M., Kreienbrock, L., & Hille, K. (2019) · Veterinary Microbiology · doi:10.1016/j.vetmic.2019.03.025 · Cited by 131 · see citing works

Emergence and spread of antibiotic-resistant foodborne pathogens from farm to table

Kim, J., & Ahn, J. (2022) · Food Science and Biotechnology · doi:10.1007/s10068-022-01157-1 · Cited by 126 · see citing works

Antibiotic Resistance: From Pig to Meat

Monger, X. C., Gilbert, A.-A., Saucier, L., & Vincent, A. T. (2021) · Antibiotics · doi:10.3390/antibiotics10101209 · Cited by 123 · see citing works

Co-occurrence of mcr-1, mcr-4 and mcr-5 genes in multidrug-resistant ST10 Enterotoxigenic and Shiga toxin-producing Escherichia coli in Spain (2006-2017)

García, V., García‐Meniño, I., Mora, A., Flament-Simon, S.-C., Díaz-Jiménez, D., Blanco, J. E., Alonso, M. P., & Blanco, J. (2018) · International Journal of Antimicrobial Agents · doi:10.1016/j.ijantimicag.2018.03.022 · Cited by 109 · see citing works

Antimicrobial Resistance in the farm-to-plate Continuum: More Than a Food Safety Issue

Founou, L. L., Founou, R. C., & Essack, S. Y. (2021) · Future Science OA · doi:10.2144/fsoa-2020-0189 · Cited by 95 · see citing works

Commensal gut bacteria: distribution of Enterococcus species and prevalence of Escherichia coli phylogenetic groups in animals and humans in Portugal

Silva, N. A., Igrejas, G., Gonçalves, A., & Poeta, P. A. C. Q. D. (2011) · Annals of Microbiology · doi:10.1007/s13213-011-0308-4 · Cited by 92 · see citing works

Use Estimates of In-Feed Antimicrobials in Swine Production in the United States

Apley, M. D., Bush, E. J., Morrison, R. B., Singer, R. S., & Snelson, H. (2012) · Foodborne Pathogens and Disease · doi:10.1089/fpd.2011.0983 · Cited by 90 · see citing works

Antimicrobial drug resistance against Escherichia coli and its harmful effect on animal health

Arbab, S., Ullah, H., Wang, W., & Zhang, J. (2022) · Veterinary Medicine and Science · doi:10.1002/vms3.825 · Cited by 78 · see citing works

Antibiotic Resistance Profiles and Molecular Characteristics of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli and Klebsiella pneumoniae Isolated From Shrimp Aquaculture Farms in Kerala, India

Sivaraman, G. K., Rajan, V., Vijayan, A., Elangovan, R., Prendiville, A., & Bachmann, T. T. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.622891 · Cited by 77 · see citing works

Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans

Skurnik, D., Clermont, O., Guillard, T., Launay, A., Danilchanka, O., Pons, S., Diancourt, L., Lebreton, F., Kadlec, K., Roux, D., et al. (2015) · Molecular Biology and Evolution · doi:10.1093/molbev/msv280 · Cited by 76 · see citing works

Dissemination and Comparison of Genetic Determinants of mcr-Mediated Colistin Resistance in Enterobacteriaceae via Retailed Raw Meat Products

Gelbíčová, T., Baráková, A., Florianová, M., Jamborová, I., Zelendová, M., Pospíšilová, L., Koláčková, I., & Karpíšková, R. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.02824 · Cited by 68 · see citing works

Genomic Diversity and Virulence Potential of ESBL- and AmpC-β-Lactamase-Producing Escherichia coli Strains From Healthy Food Animals Across Europe

Ewers, C., de Jong, A., Prenger‐Berninghoff, E., Garch, F. E., Leidner, U., Tiwari, S. K., & Semmler, T. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.626774 · Cited by 67 · see citing works

Extended spectrum ß-lactamase-producing Escherichia coli among backyard poultry farms, farmers, and environments in Thailand

Tansawai, U., Walsh, T. R., & Niumsup, P. R. (2019) · Poultry Science · doi:10.3382/ps/pez009 · Cited by 65 · see citing works

Antimicrobial Resistance Profile and ExPEC Virulence Potential in Commensal Escherichia coli of Multiple Sources

Massella, E., Giacometti, F., Bonilauri, P., Reid, C. J., Djordjevic, S. P., Merialdi, G., Bacci, C., Fiorentini, L., Massi, P., Bardasi, L., et al. (2021) · Antibiotics · doi:10.3390/antibiotics10040351 · Cited by 64 · see citing works

Molecular assessment of antimicrobial resistance and virulence in multi drug resistant ESBL-producing Escherichia coli and Klebsiella pneumoniae from food fishes, Assam, India

Sivaraman, G. K., Sudha, S. S., Muneeb, K. H., Shome, B. R., Holmes, M. A., & Cole, J. (2020) · Microbial Pathogenesis · doi:10.1016/j.micpath.2020.104581 · Cited by 63 · see citing works

Diversity of CTX-M-positive Escherichia coli recovered from animals in Canada

Cormier, A. C., Zhang, P. L. C., Chalmers, G., Weese, J. S., Deckert, A., Mulvey, M. R., McAllister, T. A., & Boerlin, P. (2019) · Veterinary Microbiology · doi:10.1016/j.vetmic.2019.02.031 · Cited by 63 · see citing works

Molecular Characterization of Extended-Spectrum β-Lactamase-Producing Multidrug Resistant Escherichia coli From Swine in Northwest China

Liu, X., Liu, H., Wang, L., Peng, Q., Li, Y., Zhou, H., & Li, Q. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.01756 · Cited by 62 · see citing works

Whole Genome Sequencing of Escherichia coli From Store-Bought Produce

Reid, C. J., Blau, K., Jechalke, S., Smalla, K., & Djordjevic, S. P. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.03050 · Cited by 60 · see citing works

Extended-Spectrum β-Lactamases (ESBL) Producing Bacteria in Animals

Tseng, C.-H., Liu, C., & Liu, P. (2023) · Antibiotics · doi:10.3390/antibiotics12040661 · Cited by 59 · see citing works

From Farm-to-Fork: E. Coli from an Intensive Pig Production System in South Africa Shows High Resistance to Critically Important Antibiotics for Human and Animal Use

Abdalla, S. E., Abia, A. L. K., Amoako, D. G., Perrett, K., Bester, L. A., & Essack, S. Y. (2021) · Antibiotics · doi:10.3390/antibiotics10020178 · Cited by 56 · see citing works

Antimicrobial resistance prevalence in commensal Escherichia coli from broilers, fattening turkeys, fattening pigs and veal calves in European countries and association with antimicrobial usage at country level

Ceccarelli, D., Hesp, A., van der Goot, J., Joosten, P., Sarrazin, S., Wagenaar, J. A., Dewulf, J., & Mevius, D. J. (2020) · Journal of Medical Microbiology · doi:10.1099/jmm.0.001176 · Cited by 56 · see citing works

Characterizing Antimicrobial Resistant Escherichia coli and Associated Risk Factors in a Cross-Sectional Study of Pig Farms in Great Britain

AbuOun, M., O’Connor, H. M., Stubberfield, E. J., Nuñéz-García, J., Sayers, E., Crook, D. W., Smith, R. P., & Anjum, M. F. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00861 · Cited by 56 · see citing works

Prevalence of ST1193 clone and IncI1/ST16 plasmid in E-coli isolates carrying blaCTX-M-55 gene from urinary tract infections patients in China

Xia, L., Liu, Y., Xia, S., Kudinha, T., Xiao, S.-N., Zhong, N., Ren, G.-S., & Zhuo, C. (2017) · Scientific Reports · doi:10.1038/srep44866 · Cited by 55 · see citing works

Dissemination of IncF-type plasmids in multiresistant CTX-M-15-producing Enterobacteriaceae isolates from surgical-site infections in Bangui, Central African Republic

Rafaï, C. D., Frank, T., Manirakiza, A., Gaudeuille, A., Mbecko, J., Nghario, L., Serdouma, E., Tekpa, B., Garin, B., & Breurec, S. (2015) · BMC Microbiology · doi:10.1186/s12866-015-0348-1 · Cited by 54 · see citing works

Molecular Diversity of ESBL-Producing Escherichia coli from Foods of Animal Origin and Human Patients

Alegría, Á., Temprano, M. A., Fernández-Natal, I., Rodríguez-Calleja, J. M., Garcı́a-López, M.-L., & Santos, J. A. (2020) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph17041312 · Cited by 54 · see citing works

One Health compartmental analysis of ESBL-producing Escherichia coli on Reunion Island reveals partitioning between humans and livestock

Miltgen, G., Martak, D., Valot, B., Kamus, L., Garrigos, T., Verchere, G., Gbaguidi‐Haore, H., Cimon, C. B., Ramiandrisoa, M., Picot, S., et al. (2022) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkac054 · Cited by 51 · see citing works

A genomic epidemiological study shows that prevalence of antimicrobial resistance in Enterobacterales is associated with the livestock host, as well as antimicrobial usage

AbuOun, M., Jones, H. F., Stubberfield, E. J., Gilson, D., Shaw, L. P., Hubbard, A. T. M., Chau, K., Sebra, R., Peto, T., Crook, D. W., et al. (2021) · Microbial Genomics · doi:10.1099/mgen.0.000630 · Cited by 50 · see citing works

Antibiotic resistance genes, mobile elements, virulence genes, and phages in cultivated ESBL-producing Escherichia coli of poultry origin in Kwara State, North Central Nigeria

Al-Mustapha, A. I., Raufu, I. A., Ogundijo, O. A., Odetokun, I. A., Tiwari, A., Brouwer, M. S. M., Adetunji, V. O., & Heikinheimo, A. (2023) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2023.110086 · Cited by 50 · see citing works

Prevalence and quantitative analysis of ESBL and AmpC beta-lactamase producing Enterobacteriaceae in broiler chicken during slaughter in Germany

von Tippelskirch, P., Gölz, G., Projahn, M., Daehre, K., Friese, A., Roesler, U. H., Alter, T., & Orquera, S. (2018) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2018.05.022 · Cited by 49 · see citing works

Clinically Relevant Extended-Spectrum β-Lactamase–Producing Escherichia coli Isolates From Food Animals in South Korea

Song, J.-H., Oh, S. S., Kim, J., Park, S., & Shin, J. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00604 · Cited by 47 · see citing works

Toward Antibiotic Stewardship: Route of Antibiotic Administration Impacts the Microbiota and Resistance Gene Diversity in Swine Feces

Ricker, N., Trachsel, J., Colgan, P., Jones, J. A., Choi, J., Lee, J., Coetzee, J. F., Howe, A., Brockmeier, S. L., Loving, C. L., et al. (2020) · Frontiers in Veterinary Science · doi:10.3389/fvets.2020.00255 · Cited by 45 · see citing works

The importance of using whole genome sequencing and extended spectrum beta-lactamase selective media when monitoring antimicrobial resistance

Duggett, N. A., AbuOun, M., Randall, L. P., Horton, R. A., Lemma, F., Rogers, J., Crook, D. W., Teale, C. J., & Anjum, M. F. (2020) · Scientific Reports · doi:10.1038/s41598-020-76877-7 · Cited by 45 · see citing works

Genomic insights of high-risk clones of ESBL-producing Escherichia coli isolated from community infections and commercial meat in southern Brazil

Soncini, J. G. M., Cerdeira, L., Sano, E., Koga, V. L., Tizura, A. T., Tano, Z. N., Nakazato, G., Kobayashi, R. K. T., Aires, C. A. M., Lincopán, N., et al. (2022) · Scientific Reports · doi:10.1038/s41598-022-13197-y · Cited by 43 · see citing works

Diversity and trends in population structure of ESBL-producing Enterobacteriaceae in febrile urinary tract infections in children in France from 2014 to 2017

Birgy, A., Madhi, F., Jung, C., Lévy, C., Cointe, A., Bidet, P., Hobson, C. A., Béchet, S., Sobral, E., Vu-Thien, H., et al. (2019) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkz423 · Cited by 43 · see citing works

Extended-spectrum β-lactamase-producing Escherichia coli from extraintestinal infections in humans and from food-producing animals in Italy: a ‘One Health’ study

Giufrè, M., Mazzolini, E., Cerquetti, M., Brusaferro, S., Accogli, M., Agnoletti, F., Agodi, A., Alborali, G. L., Arghittu, M., Auxilia, F., et al. (2021) · International Journal of Antimicrobial Agents · doi:10.1016/j.ijantimicag.2021.106433 · Cited by 42 · see citing works

Prevalence and Characterization of ESBL/AmpC Producing Escherichia coli from Fresh Meat in Portugal

Clemente, L., Leão, C., Moura, L., Albuquerque, T., & Amaro, A. (2021) · Antibiotics · doi:10.3390/antibiotics10111333 · Cited by 38 · see citing works

Characterization of Extended-Spectrum β-Lactamase-Producing Escherichia coli Isolates That Cause Diarrhea in Sheep in Northwest China

Zhao, X., Zhao, H., Zhou, Z., Miao, Y., Li, R., Yang, B., Cao, C., Xiao, S., Wang, X., Liu, H., et al. (2022) · Microbiology Spectrum · doi:10.1128/spectrum.01595-22 · Cited by 38 · see citing works

Molecular Characterization of Antimicrobial Resistance in Escherichia coli from Rabbit Farms in Tai’an, China

Zhao, X., Yang, J., Ju, Z., Chang, W., & Sun, S. (2018) · BioMed Research International · doi:10.1155/2018/8607647 · Cited by 36 · see citing works

Prevalence and transmission characteristics of Listeria species from ruminants in farm and slaughtering environments in China

Zhao, Q., Hu, P., Li, Q., Zhang, S., Li, H., Chang, J., Jiang, Q. F. N., Zheng, Y., Li, Y., Liu, Z., et al. (2021) · Emerging Microbes & Infections · doi:10.1080/22221751.2021.1888658 · Cited by 36 · see citing works

Probable intrafamily transmission of a highly virulent CTX-M-3-producing Escherichia coli belonging to the emerging phylogenetic subgroup D2 O102-ST405 clone

Mihaïla-Amrouche, L., Wyplosz, B., Clermont, O., Garry, L., Hipeaux, M. C., Vittecoq, D., Dussaix, É., Denamur, É., & Branger, C. (2010) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkq155 · Cited by 34 · see citing works

Longitudinal study on antimicrobial consumption and resistance in rabbit farming

Agnoletti, F., Brunetta, R., Bano, L., Drigo, I., & Mazzolini, E. (2017) · International Journal of Antimicrobial Agents · doi:10.1016/j.ijantimicag.2017.10.007 · Cited by 33 · see citing works

Corrigendum: Characterizing Antimicrobial Resistant Escherichia coli and Associated Risk Factors in a Cross-Sectional Study of Pig Farms in Great Britain

AbuOun, M., O'Connor, H. M., Stubberfield, E. J., Nuñéz-García, J., Sayers, E., Crook, D. W., Smith, R. P., & Anjum, M. F. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.693940 · Cited by 32 · see citing works

Antimicrobial use and resistance in Escherichia coli from healthy food-producing animals in Guadeloupe

Gruel, G., Sellin, A., Riveiro, H., Pot, M., Breurec, S., Guyomard-Rabenirina, S., Talarmin, A., & Ferdinand, S. (2021) · BMC Veterinary Research · doi:10.1186/s12917-021-02810-3 · Cited by 31 · see citing works

Genetic characterization of ESBL-producing and ciprofloxacin-resistant Escherichia coli from Belgian broilers and pigs

Koster, S. D., Ringenier, M., Xavier, B. B., Lammens, C., Coninck, D. I. M. D., Bruyne, K. D., Mensaert, K., den Bergh, M. K.-V., Kluytmans, J. A. J. W., Dewulf, J., et al. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1150470 · Cited by 31 · see citing works

Evidence of sheep and abattoir environment as important reservoirs of multidrug resistant Salmonella and extended-spectrum beta-lactamase Escherichia coli

Atlaw, N., Keelara, S., Correa, M., Foster, D. M., Gebreyes, W. A., Aïdara‐Kane, A., Harden, L., Thakur, S., & Fedorka–Cray, P. J. (2021) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2021.109516 · Cited by 29 · see citing works

Evaluation of the overall impact of antibiotics growth promoters on broiler health and productivity during the medication and withdrawal period

Hamid, H., Zhao, L. H., Ma, G. Y., Li, W. X., Shi, H., Zhang, J. Y., Ji, C., & Ma, Q. G. (2019) · Poultry Science · doi:10.3382/ps/pey598 · Cited by 28 · see citing works

High prevalence of blaCTX-M and blaSHV among ESBL producing E. coli isolates from beef cattle in China’s Sichuan-Chongqing Circle

Zhang, Y.-L., Huang, F.-Y., Gan, L.-L., Yu, X., Cai, D., Fang, J. S., Zhong, Z., Guo, H., Xie, Y., Yi, J., et al. (2021) · Scientific Reports · doi:10.1038/s41598-021-93201-z · Cited by 27 · see citing works

The Pheno- and Genotypic Characterization of Porcine Escherichia coli Isolates

Bernreiter-Hofer, T., Schwarz, L., Müller, E., Cabal-Rosel, A., Korus, M., Mišić, D., Frankenfeld, K., Abraham, K., Grünzweil, O., Weiss, A., et al. (2021) · Microorganisms · doi:10.3390/microorganisms9081676 · Cited by 27 · see citing works

Use of genomics to explore AMR persistence in an outdoor pig farm with low antimicrobial usage

Storey, N., Cawthraw, S. A., Turner, O., Rambaldi, M., Lemma, F., Horton, R. A., Randall, L. P., Duggett, N. A., AbuOun, M., Martelli, F., et al. (2022) · Microbial Genomics · doi:10.1099/mgen.0.000782 · Cited by 25 · see citing works

Prevalence and Molecular Epidemiology of Extended-Spectrum-β-Lactamase (ESBL)-Producing Escherichia coli from Multiple Sectors of Poultry Industry in Korea

Kim, H., Kim, Y. A., Seo, Y. H., Lee, H., & Lee, K. (2021) · Antibiotics · doi:10.3390/antibiotics10091050 · Cited by 22 · see citing works

Proteome response of an extraintestinal pathogenic Escherichia coli strain with zoonotic potential to human and chicken sera

Li, G., Cai, W., Hussein, A., Wannemuehler, Y. M., Logue, C. M., & Nolan, L. K. (2012) · Journal of Proteomics · doi:10.1016/j.jprot.2012.05.044 · Cited by 21 · see citing works

Phylogenetic Characterization and Multilocus Sequence Typing of Extended-Spectrum Beta Lactamase-Producing Escherichia coli from Food-Producing Animals, Beef, and Humans in Southwest Nigeria

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Genome Analysis of ESBL-Producing Escherichia coli Isolated from Pigs

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Description of Antimicrobial-Resistant Escherichia coli and Their Dissemination Mechanisms on Dairy Farms

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Molecular Detection and Antibiogram of ESBL-Producing and Carbapenem-Resistant Escherichia coli from Rabbit, Swine, and Poultry in Malaysia

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First Global Report of Plasmid-Mediated mcr-1 and Extended-Spectrum Beta-Lactamase-Producing Escherichia coli from Sheep in Portugal

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Immunogenic protein profiling of pathogenic Escherichia coli strains isolated from infants with diarrhea in Quetta Balochistan

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A Systematic Review on Antimicrobial Resistance in Ghana from a One Health Perspective

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Antimicrobial Resistance Patterns and Risk Factors Associated with ESBL-Producing and MDR Escherichia coli in Hospital and Environmental Settings in Lusaka, Zambia: Implications for One Health, Antimicrobial Stewardship and Surveillance Systems

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Resistance and Virulence Surveillance in Escherichia coli Isolated from Commercial Meat Samples: A One Health Approach

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Environmental resistomes and antimicrobial resistance: integrating the One Health framework

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Unveiling Antibiotic Resistance, Clonal Diversity, and Biofilm Formation in E. coli Isolated from Healthy Swine in Portugal

Silva, A., SILVA, V. Y. N. E. D., Dapkevicius, M. D. L. E., Azevedo, M., Cordeiro, R., Pereira, J. E., Valentão, P., Falco, V., Igrejas, G., Caniça, M., et al. (2024) · Pathogens · doi:10.3390/pathogens13040305 · Cited by 12 · see citing works

Whole-Genome Sequencing of Human and Porcine Escherichia coli Isolates on a Commercial Pig Farm in South Africa

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Comprehensive Assessment of Multidrug-Resistant and Extraintestinal Pathogenic Escherichia coli in Wastewater Treatment Plant Effluents

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Antimicrobial-resistant Escherichia Coli and Salmonella in poultry production and spread and effect in the one health framework

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High rate of multidrug resistance and integrons in Escherichia coli isolates from diseased ducks in select regions of China

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The clinical praxis of bacteriocins as natural anti-microbial therapeutics

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Aguilar, G. J., de Oliveira, A. M., Augusto, P. E. D., & Tapia‐Blácido, D. R. (2025) · ACS Applied Materials & Interfaces · doi:10.1021/acsami.5c16814 · Cited by 10 · see citing works

Extended-spectrum β-lactamase-producing Enterobacterales in diverse foodstuffs: a prospective, longitudinal study in the city of Basel, Switzerland

Gómez-Sanz, E., Bagutti, C., García-Martín, A. B., Roth, J. A., Alt, M., Pekerman, L. M., Schindler, R., Furger, R., Eichenberger, L., Steffen, I., et al. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1295037 · Cited by 9 · see citing works

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Kim, J.-I., Moon, B., Ali, M. S., Kang, H.-S., Choi, J.-H., Kim, J., Park, S., & Lim, S. (2025) · Applied and Environmental Microbiology · doi:10.1128/aem.02525-24 · Cited by 8 · see citing works

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Evaluation of extended-spectrum β-lactamase production and plasmid-mediated quinolone resistance in Escherichia coli isolated from raw milk

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Rahaman, A., Mimi, A., Antor, M. T. H., Bakhtiyar, Z., Hasan, M. F., Fahim, N. A. I., Jany, D. A., & Rahman, M. T. (2025) · One Health · doi:10.1016/j.onehlt.2025.101237 · Cited by 6 · see citing works

Genomic epidemiology and plasmid characterization of antimicrobial resistance and virulence in cattle Escherichia coli from China

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Whole genome sequence analysis reveals high genomic diversity and potential host-driven adaptations among multidrug-resistant Escherichia coli from pre-weaned dairy calves

Lee, K. Y., Schlesener, C., Aly, S. S., Huang, B. C., Li, X., Atwill, E. R., & Weimer, B. C. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1420300 · Cited by 6 · see citing works

Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana

Sunmonu, G. T., Adzitey, F., Odih, E. E., Tibile, B. A., Ekli, R., Aduah, M., Oaikhena, A. O., Akinlabi, O. C., Abia, A. L. K., Amoako, D. G., et al. (2025) · PLoS ONE · doi:10.1371/journal.pone.0315583 · Cited by 6 · see citing works

Molecular characterization of multidrug-resistant Escherichia coli in the Greater Accra Region, Ghana: a ‘One Health’ approach

Olu-Taiwo, M., Egyir, B., Owusu-Nyantakyi, C., Forson, A. O., & Opintan, J. A. (2025) · One Health Outlook · doi:10.1186/s42522-025-00154-8 · Cited by 6 · see citing works

Identification, Typing, and Drug Resistance Analysis of Escherichia coli in Two Different Types of Broiler Farms in Hebei Province

Liang, C., Cui, H. Y., Chen, L., Zhang, H., Zhang, C., & Liu, J. (2023) · Animals · doi:10.3390/ani13203194 · Cited by 6 · see citing works

Pathovars, occurrence, and characterization of plasmid-mediated quinolone resistance in diarrheal Escherichia coli isolated from farmers and farmed chickens in Tunisia and Nigeria

Al‐Gallas, N., Fadel, M.-E., Altammar, K. A., Awadi, Y., & Aïssa, R. B. (2024) · Letters in Applied Microbiology · doi:10.1093/lambio/ovae043 · Cited by 5 · see citing works

Genetic diversity, biocide susceptibility and biofilm forming ability of Escherichia coli isolates from slaughterhouse environments in Nigeria

Beshiru, A., Igbinosa, E. O., Dahouk, S. A., Dieckmann, R., & Neuhaus, S. (2025) · LWT · doi:10.1016/j.lwt.2025.117774 · Cited by 5 · see citing works

Unexplained High Prevalence of ESBL-Escherichia coli Among Cattle and Pigs in Peru

Salgado‐Caxito, M., Daphne León, C., Bardales-Mendoza, O., Jara, L. M., Medrano, P., Murga, C., Pérez, V., Aylas-Jurado, B., Su-Tello, R., Najarro, J., et al. (2025) · Antibiotics · doi:10.3390/antibiotics14090867 · Cited by 4 · see citing works

Comparative genomic analysis of ciprofloxacin-resistant Escherichia coli from retail chicken in Shaanxi, China and global sources

Sun, J., Han, M., Yang, Q., Li, M., Wang, S., Li, M., Zhou, W., Cui, S., & Yang, B. (2025) · Food Research International · doi:10.1016/j.foodres.2025.117261 · Cited by 3 · see citing works

Resident or transient? Whole-genome approach to tracking colistin-resistant Escherichia coli in the broiler chicken processing chain

Habib, I., Mohamed, M.-Y. I., Lakshmi, G. B., Ghazawi, A., & Khan, M. A. (2025) · Food Microbiology · doi:10.1016/j.fm.2025.104939 · Cited by 3 · see citing works

Antimicrobial resistance of Escherichia coli from dairy cattle farms with different antimicrobial use practices in Ethiopia

Tufa, T. B., Gutema, F. D., Teressa, T., Oljira, D., Hiko, A., Abdi, R. D., Regassa, F., Amenu, K., Hogeveen, H., & Stegeman, A. (2026) · Journal of Global Antimicrobial Resistance · doi:10.1016/j.jgar.2026.02.013 · Cited by 4 · see citing works

Antimicrobial Resistance and One Health: Companion Animals as Reservoirs of Bacteria and Resistance Genes in Brazil

de Medeiros, A. B. M., Diniz, L. A. S., Galdino, I. D. S., Dias, L. E., Soares, R. D. B., Diniz, A. V., da Silva, F. K., dos Santos, P. A., Martins, F. E. D. N., Simões, A. C. M. A., et al. (2025) · Revista de Gestão Social e Ambiental · doi:10.24857/rgsa.v19n3-114 · Cited by 2 · see citing works

Prevalence of ESBL-Resistant Genes in Birds in Italy—A Comprehensive Review

Khan, M. T. S., Formenti, N., Tosi, G., Guarneri, F., Scali, F., Saleemi, M. K., Monti, E., & Alborali, G. L. (2025) · Animals · doi:10.3390/ani15111598 · Cited by 3 · see citing works

Integrating One Health to Mitigate the Emergence and Spread of Antimicrobial Resistance in Livestock and Aquaculture

Ali, M. M., Hossain, D., Adesola, R. O., Hanif, A., Saeed, S. I., Mannan, M. A., Masroure, A. J., Alam, K. E., Hossain, M. K., Bristi, S. Z. T., et al. (2026) · Animal Research and One Health · doi:10.1002/aro2.70064 · Cited by 2 · see citing works

Quinolone and Tetracycline-Resistant Biofilm-Forming Escherichia coli Isolates from Slovak Broiler Chicken Farms and Chicken Meat

Dančová, N., Gregová, G., Szabóová, T., Regecová, I., Király, J., Hajdučková, V., & Hudecová, P. (2024) · Applied Sciences · doi:10.3390/app14209514 · Cited by 2 · see citing works

Persistence of mcr-1-carrying E. coli in rabbit meat production: Challenges beyond long-term colistin withdrawal

Ribeiro‐Almeida, M., Mourão, J., Rodrigues, I. C., Carvalho, A., da Costa, P. M., Peixe, L. M. S. V., & Antunes, P. (2025) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2025.111248 · Cited by 2 · see citing works

Genetic Characteristics of Antimicrobial Resistance in Escherichia coli Isolated from Farm Animals, Slaughterhouses, and Associated Environments

Pazra, D. F., & Iryawati, D. (2025) · IntechOpen eBooks · doi:10.5772/intechopen.1009260 · Cited by 1 · see citing works

High prevalence of CTX-M-1 and CTX-M-15 extended-spectrum β-lactamase-producing Escherichia coli in retail imported frozen beef in Saudi Arabia

Yamani, L. Z., & Elhadi, N. (2026) · Veterinary World · doi:10.14202/vetworld.2026.569-579 · Cited by 1 · see citing works

Inferred Mobility-Resolved Resistome Architecture Suggests Recurrent Co-Resistance Modules on a Conserved Chromosomal Backbone in Multidrug-Resistant Escherichia coli from Intensive Swine Production in Hungary

Kerek, Á., Nagyházi, B., Tornyos, G. Á., Husz, L. H., Hetyésy, M., Kaszab, E., Fehér, E., Mag, P., & Jerzsele, Á. (2026) · Antibiotics · doi:10.3390/antibiotics15040367 · Cited by 1 · see citing works

Antimicrobial resistance profiles and whole-genome sequence analysis of extended-spectrum β-lactamase (ESBL) production in commensal Escherichia coli from poultry in Türkiye

Şahin, S., Özaslan, B. G. C., Moğulkoç, M. N., Karadağ, M., Hammerl, J. A., Grobbel, M., & Kürekçi, C. (2026) · PLoS ONE · doi:10.1371/journal.pone.0344717 · Cited by 1 · see citing works

Antimicrobial use practices, resistance drivers and policy responses in Nigerian livestock production from a One Health perspective

Ahmad, A. A., Alhassan, M. Y., & Muhammad, N. M. (2026) · Discover Public Health · doi:10.1186/s12982-026-01806-4 · Cited by 1 · see citing works

Evolutionary trends and genetic determinants of third-generation cephalosporin resistance in Escherichia coli from Korean livestock: a 14-year longitudinal study, 2010–2023

Kim, J.-I., Choi, J.-H., Ali, M. S., Moon, B., Kang, H.-S., Kim, H.-Y., Hwang, Y.-J., Lee, Y.-H., Kim, M. Y., Kim, J., et al. (2026) · Frontiers in Microbiology · doi:10.3389/fmicb.2026.1816478 · Cited by 1 · see citing works

Plasmid-driven evolution of a multi-drug resistant ETEC/ExPEC hybrid E. coli associated with neonatal septicemia in lambs, a challenge for veterinary diagnostics

de Lagarde, M., Vanier, G., Fairbrother, J., Gauthier, M.-L., Fournier, D., Guiraud, F., Fairbrother, J. M., & Roy, D. (2026) · Journal of Applied Microbiology · doi:10.1093/jambio/lxag186 · Cited by 1 · see citing works

Detection of Resistant Escherichia coli During Meat Processing in Food Establishments

Dančová, N., Regecová, I., Gregová, G., Király, J., & Szabóová, T. (2024) · Folia veterinaria · doi:10.2478/fv-2024-0014 · Cited by 1 · see citing works

Genomic Characterization of Selected Escherichia coli Strains from Catfish (Clarias gariepinus) in Nigeria

Ekwuazi, C. L., Ogbo, F. C., Stöger, A., Ruppitsch, W., & Rosel, A. C. (2024) · Applied Microbiology · doi:10.3390/applmicrobiol4030077 · Cited by 1 · see citing works

Genomic insights into multidrug-resistant extraintestinal pathogenic Escherichia coli O4:H12 harboring mcr-5 and blaSHV-12 on conjugative plasmids isolated from chicken meat in Japan

Xedzro, C., Shimamoto, T., Ahmed, A. M., Yu, L., Sugawara, Y., Sugai, M., & Shimamoto, T. (2025) · Journal of Applied Microbiology · doi:10.1093/jambio/lxaf229 · Cited by 1 · see citing works

Extraintestinal Escherichia coli from camel carcasses: Phylogroups, serotypes, and markers of virulence

Hrala, M., Joseph, M., Florianová, M., Juřicová, H., Wernery, U., Šmajs, D., & Bosák, J. (2025) · PLoS ONE · doi:10.1371/journal.pone.0334045 · Cited by 1 · see citing works

Unveiling antibiotic resistance, clonal diversity, and biofilm formation in E. coli for safer pork productionPreprint

SILVA, V. Y. N. E. D., Dapkevicius, M. D. L. E., Azevedo, M., Cordeiro, R., Valentão, P., Falco, V., Igrejas, G., Caniça, M., & Poeta, P. A. C. Q. D. (2023) · Research Square · doi:10.21203/rs.3.rs-3644686/v1

Gut colonization by extended-spectrum β-lactamase-producing Escherichia coli in dairy herd in Brazil: successful dissemination of a One Health clone

Sartori, L., Sellera, F. P., Pereira, T. S., Fuga, B., Fuentes‐Castillo, D., Dropa, M., Moura, Q., Fernandes, M. R., Rodrigues, L., Esposito, F. R. D. S., et al. (2024) · Veterinary Research Communications · doi:10.1007/s11259-024-10456-3

Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality GhanaPreprint

Sunmonu, G. T., Adzitey, F., Odih, E. E., Tibile, B. A., Ekli, R., Aduah, M., Oaikhena, A. O., Akinlabi, O. C., Abia, A. L. K., Amoako, D. G., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.05.611394

Genetic Contexts of Plasmid- and Chromosome-Mediated bla CTX-M-32 in Escherichia coli from Pigs and Poultry in the Western Region of Cuba

Dorta, Y. L., Fernandez, J. E., Hernández-Fillor, R. E., Baez, M., Brilhante, M., Butaye, P., Espinosa, I., & Perreten, V. (2025) · Microbial Drug Resistance · doi:10.1089/mdr.2025.0027

Third-Generation Cephalosporin-Resistant Escherichia coli Isolates Belonging to High-Risk Clones Obtained from Fresh Pork Meat in La Plata City, Argentina

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