The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
Collaboration gets the most out of software
Open accessAbstract
By centralizing many of the tasks associated with the upkeep of scientific software, SBGrid allows researchers to spend more of their time on research.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
PHENIX : a comprehensive Python-based system for macromolecular structure solution
Adams, P. D., Afonine, P. V., Bunkóczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L.-W., Kapral, G. J., Grosse-Kunstleve, R. W., et al. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909052925 · Cited by 23,716
Phaser crystallographic software
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C., & Read, R. J. (2007) · Journal of Applied Crystallography · doi:10.1107/s0021889807021206 · Cited by 20,612
Overview of the CCP 4 suite and current developments
Winn, M. D., Ballard, C. C., Cowtan, K. D., Dodson, E. J., Emsley, P., Evans, P. R., Keegan, R. M., Krissinel, E. B., Leslie, A. G. W., McCoy, A., et al. (2011) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444910045749 · Cited by 12,353
Research works printed but not linked: 13
- Anderson, 2007, A qualitative study of the implementation of a bioinformatics tool in a biological research laboratory, Intl J Med Inform, 76, 821, 10.1016/j.ijmedinf.2006.09.022 · DOI
- Finholt, 2003, Collaboratories as a new form of scientific organization, Econ Innov New Technol, 12, 5, 10.1080/10438590303119 · DOI
- Foster, 2006, A two-way street to science’s future, Nature, 440, 419, 10.1038/440419a · DOI
- Hannay, 2009, How do scientists develop and use scientific software?, Software Eng Comput Sci Eng, 1, 10.1109/SECSE.2009.5069155 · DOI
- Morin, 2013, Structural biology computing: Lessons for the biomedical research sciences, Biopolymers, 99, 809, 10.1002/bip.22343 · DOI
- Morin, 2012a, Shining light into black boxes, Science, 336, 159, 10.1126/science.1218263 · DOI
- Morin, 2012b, A quick guide to software licensing for the scientist-programmer, PLoS Comput Biol, 8, e1002598, 10.1371/journal.pcbi.1002598 · DOI
- O’Donovan, 2012, A grid-enabled web service for low-resolution crystal structure refinement, Acta Crystallogr D Biol Crystallogr, 68, 261, 10.1107/S0907444912001163 · DOI
- Pordes, 2007, The open science grid, J Phys: Conf Ser, 78, 012057, 10.1088/1742-6596/78/1/012057 · DOI · Paper page
- Schröder, 2010, Super-resolution biomolecular crystallography with low-resolution data, Nature, 464, 1218, 10.1038/nature08892 · DOI · Paper page
- Stokes-Rees, 2012, Adapting federated cyberinfrastructure for shared data collection facilities in structural biology, J Synchrotron Radiat, 19, 462, 10.1107/S0909049512009776 · DOI
- Stokes-Rees, 2010, Protein structure determination by exhaustive search of Protein Data Bank derived databases, Proc Natl Acad Sci USA, 107, 21476, 10.1073/pnas.1012095107 · DOI · Paper page
- Wassenaar, 2012, WeNMR: structural biology on the grid, J Grid Computing, 10, 743, 10.1007/s10723-012-9246-z · DOI
Cited by
Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation
Wrapp, D., Wang, N., Corbett, K. S., Goldsmith, J. A., Hsieh, C.-L., Abiona, O., Graham, B. S., & McLellan, J. S. (2020) · Science · doi:10.1126/science.abb2507 · Cited by 8,897
Protein Data Bank: the single global archive for 3D macromolecular structure data
wwPDB consortium, Burley, S. K., Berman, H. M., Bhikadiya, C., Bi, C., Chen, L., Costanzo, L. D., Christie, C., Duarte, J. M., Dutta, S., et al. (2019) · Nucleic Acids Research · doi:10.1093/nar/gky949 · Cited by 1,163
Distinct conformational states of SARS-CoV-2 spike protein
Cai, Y., Zhang, J., Xiao, T., Peng, H., Sterling, S. M., Walsh, R. M., Rawson, S., Rits-Volloch, S., & Chen, B. (2020) · Science · doi:10.1126/science.abd4251 · Cited by 1,221
Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen
Pallesen, J., Wang, N., Corbett, K. S., Wrapp, D., Kirchdoerfer, R. N., Turner, H. L., Cottrell, C. A., Becker, M. M., Wang, L., Shi, W., et al. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1707304114 · Cited by 1,073
Design of protein-binding proteins from the target structure alone
Cao, L., Coventry, B., Goreshnik, I., Huang, B., Sheffler, W., Park, J. S., Jude, K. M., Marković, I., Kadam, R. U., Verschueren, K. H. G., et al. (2022) · Nature · doi:10.1038/s41586-022-04654-9 · Cited by 577
Metadata
- Authors
- Morin, A., Eisenbraun, B., Key, J., Sanschagrin, P. C., Timony, M. A., Ottaviano, M., & Sliz, P.
- Venue
- eLife
- Publisher
- eLife Sciences Publications, Ltd
- Published
- 2013-09-10
- Volume
- 2
- Pages
- e01456-e01456
- ISSN
- 2050-084X (ISSN-L)
- OpenAlex
- W2113904137
- Cited by
- 1,081
- References
- 3
- FWCI
- 74.30
- Type
- journal article
- Language
- en
- Open access
- gold
- Licence
- creativecommons.org/licenses/by/3.0/ (vor)
- creativecommons.org/licenses/by/3.0/ (am)
- creativecommons.org/licenses/by/3.0/ (tdm)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
