Cited by 52Seed Germination and PhysiologyGenetic and Environmental Crop StudiesPlant Parasitism and Resistance

Variation in wild pea (Pisum sativum subsp.elatius) seed dormancy and its relationship to the environment and seed coat traits

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Hradilová, Iveta, Duchoslav, Martin, Brus, Jan, Pechanec, Vilém, Hýbl, Miroslav, Kopecký, Pavel, Smržová, Lucie, Štefelová, Nikola +6 more·2019·PeerJ

Abstract

Background: Seed germination is one of the earliest key events in the plant life cycle. The timing of transition from seed to seedling is an important developmental stage determining the survival of individuals that influences the status of populations and species. Because of wide geographical distribution and occurrence in diverse habitats, wild pea (Pisum sativum subsp.elatius) offers an excellent model to study physical type of seed dormancy in an ecological context. This study addresses the gap in knowledge of association between the seed dormancy, seed properties and environmental factors, experimentally testing oscillating temperature as dormancy release clue. Methods: Seeds of 97 pea accessions were subjected to two germination treatments (oscillating temperatures of 25/15 °C and 35/15 °C) over 28 days. Germination pattern was described using B-spline coefficients that aggregate both final germination and germination speed. Relationships between germination pattern and environmental conditions at the site of origin (soil and bioclimatic variables extracted from WorldClim 2.0 and SoilGrids databases) were studied using principal component analysis, redundancy analysis and ecological niche modelling. Seeds were analyzed for the seed coat thickness, seed morphology, weight and content of proanthocyanidins (PA). Results: Seed total germination ranged from 0% to 100%. Cluster analysis of germination patterns of seeds under two temperature treatments differentiated the accessions into three groups: (1) non-dormant (28 accessions, mean germination of 92%), (2) dormant at both treatments (29 acc., 15%) and (3) responsive to increasing temperature range (41 acc., with germination change from 15 to 80%). Seed coat thickness differed between groups with dormant and responsive accessions having thicker testa (median 138 and 140 µm) than non-dormant ones (median 84 mm). The total PA content showed to be higher in the seed coat of dormant (mean 2.18 mg g−1) than those of non-dormant (mean 1.77 mg g−1) and responsive accessions (mean 1.87 mg g−1). Each soil and bioclimatic variable and also germination responsivity (representing synthetic variable characterizing germination pattern of seeds) was spatially clustered. However, only one environmental variable (BIO7, i.e., annual temperature range) was significantly related to germination responsivity. Non-dormant and responsive accessions covered almost whole range of BIO7 while dormant accessions are found in the environment with higher annual temperature, smaller temperature variation, seasonality and milder winter. Ecological niche modelling showed a more localized potential distribution of dormant group. Seed dormancy in the wild pea might be part of a bet-hedging mechanism for areas of the Mediterranean basin with more unpredictable water availability in an otherwise seasonal environment. This study provides the framework for analysis of environmental aspects of physical seed dormancy.

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  • Tegument thickness is the main factor responsible for the physical dormancy and consequent inhibition of seed germination in wild pea (P. sativum subsp. elatius).

    “The tegument thickness was highlighted as the main factor responsible for the physical dormancy and the consequent inhibition of seed germination in wild pea ( P. sativum subsp. elatius ) (Hradilová et al., 2019).”

    From Exploring the Applicability of Calorespirometry to Assess Seed Metabolic Stability Upon Temperature Stress Conditions—Pisum sativum L. Used as a Case Study (2022) · cites this paper as Hradilová et al., 2019

    The Results section on seed coat thickness reports that dormant wild-pea accessions had thicker seed coats than non-dormant ones, and the Discussion describes a positive correlation between testa thickness and dormancy (page numbers unavailable). These passages support an association, but they do not establish thickness as the main factor responsible for physical dormancy or germination inhibition; some non-dormant accessions also had thick seed coats. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • Optimal temperature conditions are critical for the metabolic processes involved in seedling growth.

    “Some studies [3,15] have shown that optimal temperature conditions are critical for the metabolic processes involved in seedling growth.”

    From Optimizing Water, Temperature, and Density Conditions for In Vitro Pea (Pisum sativum L.) Germination (2024) · cites this paper as [15]

    The Discussion (page unavailable) says temperature is a critical factor regulating seed dormancy and germination, and the Results report different germination responses under two temperature regimes. The paper does not establish an optimal temperature for metabolic processes involved in seedling growth; it studies seed germination rather than seedling growth. (LLM, conf=0.82)

    Experimental — accuracy not yet measured

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Research works printed but not linked: 113

  1. Ader F 1965 On reducing the proportion of hard seeds in legume seed lots International Seed Testing Association Proceedings 30 911 921
  2. Afzal SF Ni J Chen J Wang Q Liu W Chen X Tang C Fu S Wu L 2017 Proanthocyanidins in seed coat tegmen and endospermic cap inhibit seed germination in Sapium sebiferum PeerJ 6 e4690 10.7717/peerj.4690 PMC5924686 29713566 · DOI
  3. Akaike H 1974 A new look at the statistical model identification IEEE Transactions on Automatic Control 19 716 723 10.1109/TAC.1974.1100705 · DOI · Paper page
  4. Appelhagen I Thiedig K Nordholt N Schmidt N Huep G Sagasser M Weisshaar B 2014 Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection Planta 240 955 970 10.1007/s00425-014-2088-0 24903359 · DOI
  5. Baskin CC Baskin JM 2014 Seeds: ecology, biogeography, and evolution of dormancy and germination Academic Press San Diego
  6. Baskin JM Baskin CC 2004 A classification system for seed dormancy Seed Science Research 14 1 16 10.1079/SSR2003150 · DOI
  7. Batlla D Benech-Arnold RL 2015 A framework for the interpretation of temperature effects on dormancy and germination in seed populations showing dormancy Seed Science Research 25 147 158 10.1017/S0960258514000452 · DOI
  8. Benjamini Y Hochberg Y 1995 Controlling the false discovery rate—a practical and powerful approach to multiple testing Journal of the Royal Statistical Society, Series B 57 289 300
  9. Berger JD Shrestha D Ludwig C 2017 Reproductive strategies in Mediterranean Legumes: trade-offs between phenology, seed size and vigor within and between wild and domesticated Lupinus species collected along aridity gradients Frontiers in Plant Sciences 8 Article 548 PMC5390039 28450875
  10. 2013 Seeds: physiology of development, germination and dormancy Bewley JD Bradford K Hilhorst H Nonogaki H New York Springer 3rd edition
  11. Borcard D Legendre P 2002 All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices Ecological Modelling 153 51 68 10.1016/S0304-3800(01)00501-4 · DOI
  12. Bradford KJ 2002 Applications of hydrothermal time to quantifying and modelling seed germination and dormancy Weed Science 50 248 260 10.1614/0043-1745(2002)050[0248:AOHTTQ]2.0.CO;2 · DOI
  13. Burden RL Faires JD 2011 Numerical analysis PWS Publishing Company Boston 9th edition
  14. Burghardt LT Brianne R Edwards BR Donohue K 2015 Multiple paths to similar germination behavior in Arabidopsis thaliana New Phytologist 209 1301 1312 10.1111/nph.13685 26452074 · DOI
  15. Cechová M Válková M Hradilová I Soukup A Janská A Smýkal P Bednář P 2017 Towards better understanding of pea seed dormancy using laser desorption/ionization mass spectrometry International Journal of Molecular Sciences 18 Article 2196 10.3390/ijms18102196 PMC5666877 29065445 · DOI
  16. Chen M MacGregor DR Dave A Florance H Moore K Paszkiewicz K Smirnoff N Graham IA Penfield S 2014 Maternal temperature history activates Flowering Locus T in fruits to control progeny dormancy according to time of year Proceedings of the National Academy of Sciences of the United States of America 111 18787 18792 10.1073/pnas.1412274111 25516986 PMC4284563 · DOI
  17. Clauss MJ Venable DL 2000 Seed germination in desert annuals: an empirical test of adaptive bet hedging American Naturalist 155 168 186 10.1086/303314 10686159 · DOI
  18. De Boor C 1978 A practical guide to splines Springer New York
  19. Degreef J Rocha OJ Vanderborght T Baudoin JP 2002 Soil seed bank and seed dormancy in wild populations of lima bean (Fabaceae): considerations for in situ and ex situ conservation American Journal of Botany 89 1644 1650 10.3732/ajb.89.10.1644 21665592 · DOI
  20. Diederichsen A Jones-Flory LL 2005 Accelerated aging tests with seeds of 11 flax (Linum usitatissimum) cultivars Seed Science and Technology 33 419 429 10.15258/sst.2005.33.2.14 · DOI
  21. Donohue K Rubio de Casas R Burghardt L Kovach K Willis CG 2010 Germination, post-germination adaptation, and species ecological ranges Annual Review of Ecology, Evolution, and Systematics 41 293 319 10.1146/annurev-ecolsys-102209-144715 · DOI
  22. Dutilleul P Clifford P Richardson S Hemon D 1993 Modifying the t test for assessing the correlation between two spatial processes Biometrics 49 305 314 10.2307/2532625 2720048 · DOI
  23. Edwards B Burghardt LT Kovach KE Donohue K 2017 Canalization of seasonal phenology in the presence of developmental variation: seed dormancy cycling in an annual weed Integrative and Comparative Biology 57 1021 1039 10.1093/icb/icx065 28992196 · DOI
  24. Eliášová A Münzbergová Z 2014 Higher seed size and germination rate may favour autotetraploids of Vicia cracca L. (Fabaceae) Biological Journal of the Linnean Society 113 57 73 10.1111/bij.12318 · DOI
  25. Elith J Graham CH Anderson RP Dudık M Ferrier S Guisan A Hijmans RJ Huettmann F Leathwick JR Lehmann A Li J Lohmann LG Loiselle BA Manion G Moritz C Nakamura M Nakazawa Y Overton JMcC Peterson AT Phillips SJ Richardson KS Scachetti-Pereira R Schapire RE Soberon J Williams S Wisz MS Zimmermann NE 2006 Novel methods improve prediction of species’ distributions from occurrence data Ecography 29 129 151 10.1111/j.2006.0906-7590.04596.x · DOI · Paper page
  26. Exposito-Alonso M Brennan AC Alonso-Blanco C Picó FX 2018 Spatio-temporal variation in fitness responses to contrasting environments in Arabidopsis thaliana Evolution 72 8 1570 1586 10.1111/evo.13508 29947421 · DOI
  27. Fenner M Thompson K 2005 The ecology of seeds Cambridge University Press Cambridge 250
  28. Ferreras AE Zeballos SR Funes G 2017 Inter- and intra-population variability in physical dormancy along a precipitation gradient Acta Botanica Brasilica 31 141 146 10.1590/0102-33062016abb0406 · DOI
  29. Fick SE Hijmans RJ 2017 WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas International Journal of Climatology 37 4302 4315 10.1002/joc.5086 · DOI
  30. Fitzpatrick MC Keller SR 2015 Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation Ecology Letters 18 1 16 10.1111/ele.12376 25270536 · DOI
  31. Frachon L Bartoli C Carrère S Bouchez O Chaubet A Gautier M Roby D Roux F 2018 A genomic map of climate adaptation in Arabidopsis thaliana at a micro-geographic scale Frontiers in Plant Sciences 9 Article 967 10.3389/fpls.2018.00967 PMC6048436 30042773 · DOI
  32. Gamma-Arachchige NS Baskin J Geneve RL Baskin CC 2013 Quantitative analysis of the thermal requirements for step-wise physical dormancy break in seeds of the winter annual Geranium carolinianum (Geraniaceae) Annals of Botany 111 849 858 10.1093/aob/mct046 23456728 PMC3631331 · DOI
  33. Hengl T De Jesus JM Heuvelink GB Gonzalez MR Kilibarda M Blagotić A Guevara MA 2017 SoilGrids250m: global gridded soil information based on machine learning PLOS ONE 12 e0169748 10.1371/journal.pone.0169748 28207752 PMC5313206 · DOI · Paper page
  34. Hernandez PA Graham CH Master LL Albert DL 2006 The effect of sample size and species characteristics on performance of different species distribution modeling methods Ecography 29 773 785 10.1111/j.0906-7590.2006.04700.x · DOI
  35. Holst N Rasmussen IA Bastiaans L 2007 Field weed population dynamics: a review of model approaches and applications Weed Research 47 1 14 10.1111/j.1365-3180.2007.00534.x · DOI
  36. Hradilová I Trněný O Válková M Cechová M Janská A Prokešová L Aamir K Krezdorn N Rotter B Winter P Varshney RK Soukup A Bednář P Hanáček P Smýkal P 2017 A combined comparative transcriptomic, metabolomic, and anatomical analyses of two key domestication traits: Pod dehiscence and seed dormancy in pea (Pisum sp.) Frontiers in Plant Science 8 542e 10.3389/fpls.2017.00542 28487704 PMC5404241 · DOI
  37. Janská A Pecková E Sczepaniak B Smýkal P Soukup A 2018 The role of the testa during the establishment of physical dormancy in the pea seed Annals of Botany Epub ahead of print Dec 8 2018 10.1093/aob/mcy213 PMC6526324 30534972 · DOI
  38. Jayasuriya KMGG Baskin JM Geneve RL Baskin CC 2009 A proposed mechanism for physical dormancy break in seeds of Ipomoea lacunosa (Convolvulaceae) Annals of Botany 103 433 445 10.1093/aob/mcn240 19098068 PMC2707335 · DOI
  39. Kader MA 2005 A comparison of seed germination calculation formulae and the associated interpretation of resulting data Journal & Proceedings of the Royal Society of New South Wales 138 65 75
  40. Kantar F Pilbeam CJ Hebblethwaite PD 1996 Effect of tannin content of faba bean (Vicia faba) seed on seed vigour, germination and field emergence Annals of Applied Biology 128 85 93 10.1111/j.1744-7348.1996.tb07092.x · DOI
  41. Kerdaffrec E Nordborg M 2017 The maternal environment interacts with genetic variation in regulating seed dormancy in Swedish Arabidopsis thaliana PLOS ONE 12 e0190242 10.1371/journal.pone.0190242 29281703 PMC5744996 · DOI
  42. Khan MA Ungar IA 1985 The role of hormones in regulating the germination of polymorphic and early seedling growth of Atriplex triangularis under saline conditions Physiologia Plantarum 63 109 113 10.1111/j.1399-3054.1985.tb02827.x · DOI
  43. Kleinbaum DG Klein M 2010 Logistic regression Springer Heidelberg 3rd edition
  44. Legendre P Legendre L 2012 Numerical ecology Elsevier Amsterdam 990
  45. Lepiniec L Debeaujon I Routaboul JM Baudry A Pourcel L Nesi N Caboche M Genetics and biochemistry of seed flavonoids Annual Review of Plant Biology 2006 57 405 430 10.1146/annurev.arplant.57.032905.105252 16669768 · DOI
  46. Long RL Gorecki MJ Renton M Scott JK Colville L Goggin DE Commander LE Westcott DA Cherry H Finch-Savage WE 2015 The ecophysiology of seed persistence: a mechanistic view of the journey to germination or demise Biological Reviews 90 31 59 10.1111/brv.12095 24618017 · DOI
  47. Machalová J 2002 Optimal interpolating and optimal smoothing spline Journal of Electrical Engineering 5312 79 82
  48. Mandák B 1997 Seed heteromorphism and the life cycle of plants: a literature review Preslia 69 129 159
  49. Marbach I Mayer AM 1974 Permeability of seed coats to water as related to drying conditions and metabolism of phenolics Plant Physiology 54 817 820 10.1104/pp.54.6.817 16658981 PMC366614 · DOI
  50. Meyer C Weigelt P Kreft H 2016 Multidimensional biases, gaps and uncertainties in global plant occurrence information Ecology Letters 19 992 1006 10.1111/ele.12624 27250865 · DOI
  51. Michel BE Kaufmann MR 1973 The osmotic potential of polyethylene glycol 6000 Plant Physiology 51 914 916 10.1104/pp.51.5.914 16658439 PMC366375 · DOI
  52. Moïse JA Han S Gudynaite-Savitch L Johnson DA Miki BLA 2005 Seed coats: structure, development, composition, and biotechnology In Vitro Cellular & Developmental Biology—Plant 41 620 644 10.1079/IVP2005686 · DOI
  53. Norman HC Cocks PC Galwey NW 2002 Hardseededness in annual clovers: variation between populations from wet and dry environments Australian Journal of Agricultural Science 53 821 829 10.1071/AR01115 · DOI
  54. Osmond CB Björkman O Anderson DJ 1980 Physiological processes in plant ecology—towards a synthesis with Atriplex Springer Berlin
  55. Pang Y Peel GJ Sharma SB Tang Y Dixon RA 2008 A transcript profiling approach reveals an epicatechin-specific glucosyltransferase expressed in the seed coat of Medicago truncatula Proceedings of the National Academy of Sciences of the United States of America 105 14210 14215 10.1073/pnas.0805954105 18772380 PMC2544603 · DOI
  56. Penfield S MacGregor DR 2017 Effects of environmental variation during seed production on seed dormancy and germination Journal of Experimental Botany 68 819 825 10.1093/jxb/erw436 27940467 · DOI
  57. Peres-Neto P Legendre P Dray S Borcard D 2006 Variation partitioning of species data matrices: estimation and comparison of fractions Ecology 87 2614 2625 10.1890/0012-9658(2006)87[2614:VPOSDM]2.0.CO;2 17089669 · DOI
  58. Philippi T Seger J 1989 Hedging one’s evolutionary bets, revisited Trends in Ecology and Evolution 4 41 44 10.1016/0169-5347(89)90138-9 21227310 · DOI
  59. Phillips SJ Anderson RP Schapire RE 2006 Maximum entropy modeling of species geographic distributions Ecological Modelling 190 231 259 10.1016/j.ecolmodel.2005.03.026 · DOI
  60. Pourcel L Routaboul JM Cheynier V Lepiniec L Debeaujon I 2007 Flavonoid oxidation in plants: from biochemical properties to physiological functions Trends in Plant Sciences 12 29 36 10.1016/j.tplants.2006.11.006 17161643 · DOI
  61. Probert R 2000 The role of temperature in the regulation of seed dormancy and germination Seeds: the ecology of regeneration in plant communities Fenner M CAB International Wallingford 261 292 10.1079/9780851994321.0261 · DOI
  62. Quinlivan BJ 1961 The effect of constant and fluctuating temperatures on the permeability of the hard seeds of some legume species Australian Journal of Agricultural Research 12 1009 1022 10.1071/AR9611009 · DOI
  63. Quinlivan BJ 1966 The relationship between temperature fluctuations and the softening of hard seeds of some legume species Australian Journal of Agricultural Research 17 625 631 10.1071/AR9660625 · DOI
  64. Quinlivan BJ 1967 Environmental variation in the long term pattern of germination from hard seeds of Lupinus varius Australian Journal of Experimental Agriculture and Animal Husbandry 7 263 265 10.1071/EA9670263 · DOI
  65. Quinlivan BJ 1968 The softening of hard seeds of san-plain lupin (Lupinus varius) Australian Journal of Agricultural Research 19 507 515 10.1071/AR9680507 · DOI
  66. Quinlivan BJ Millington AJ 1962 The effect of a Mediterranean summer environment on the permeability of hard seeds of subterranean clover Australian Journal of Agricultural Research 13 377 387 10.1071/AR9620377 · DOI
  67. Ramsay J Silverman B 2005 Functional data analysis Springer New York 2nd edition
  68. Ranal MA Santana DG 2006 How and why to measure the germination process? Brazilian Journal of Botany 29 1 11 10.1590/S0100-84042006000100002 · DOI
  69. Raviv B Aghajanyan L Granot G Makover V Frenkel O Gutterman Y Grafi G 2017 The dead seed coat functions as a long-term storage for active hydrolytic enzymes PLOS ONE 12 7 e0181102 10.1371/journal.pone.0181102 28700755 PMC5507414 · DOI
  70. Rees M 1996 Evolutionary ecology of seed dormancy and seed size Philosophical Transactions of the Royal Society of London, Series B Biological Sciences 351 1299 1308 10.1098/rstb.1996.0113 · DOI
  71. Renzi JP Chantre GR Cantamutto MA 2018 Vicia villosa ssp. villosa Roth field emergence model in semiarid agroecosystem Grass and Forage Science 73 146 158 10.1111/gfs.12295 · DOI
  72. Rosbakh S Poschlod P 2015 Initial temperature of seed germination as related to species occurrence along a temperature gradient Functional Ecology 29 5 14 10.1111/1365-2435.12304 · DOI
  73. Rosenberg MS Anderson CD 2011 PASSaGE: pattern analysis, spatial statistics, and geographic exegesis. Version 2 Methods in Ecology and Evolution 2 229 232 10.1111/j.2041-210X.2010.00081.x · DOI
  74. Rubio de Casas R Willis CG Pearse WD Baskin CC Baskin JM Cavender-Bares J 2017 Global biogeography of seed dormancy is determined by seasonality and seed size: a case study in the legumes New Phytologist 214 1527 1536 10.1111/nph.14498 28262955 · DOI
  75. Schoener TW 1968 Anolis lizards of Bimini: resource partitioning in a complex fauna Ecology 49 704 726 10.2307/1935534 · DOI
  76. Smýkal P Hradilová I Trněný O Brus J Rathore A Bariotakis M Das RR Bhattacharyya D Richards C Coyne CJ Pirintsos S 2017 Genomic diversity and macroecology of the crop wild relatives of domesticated pea Scientific Reports 7 17384 10.1038/s41598-017-17623-4 29234080 PMC5727218 · DOI
  77. Smýkal P Nelson MN Berger JD Von Wettberg EJB 2018b The impact of genetic changes during crop domestication MDPI Agronomy 8 Article 119 10.3390/agronomy8070119 · DOI
  78. Smýkal P Trněný O Brus J Hanáček P Rathore A Roma RD Pechanec V Duchoslav M Bhattacharyya D Bariotakis M Pirintsos S Berger J Toker C 2018a Genetic structure of wild pea (Pisum sativum subsp. elatius) populations in the northern part of the Fertile Crescent reflects moderate cross-pollination and strong effect of geographic but not environmental distance PLOS ONE 13 e0194056 10.1371/journal.pone.0194056 29579076 PMC5868773 · DOI
  79. Smýkal P Vernoud V Blair MW Soukup A Thompson RD 2014 The role of the testa during development and in establishment of dormancy of the legume seed Frontiers in Plant Sciences 5 Article 351 PMC4102250 25101104
  80. Soltani E Ghaderi-Far F Baskin CC Baskin JM 2015 Problems with using mean germination time to calculate rate of seed germination Australian Journal of Botany 63 1 6
  81. Šmilauer P Lepš J 2014 Multivariate analysis of ecological data using CANOCO 5 Cambridge University Press Cambridge Second edition
  82. Sperber K Steinbrecher T Graeber K Scherer G Clausing S Wiegand N James EH Rainer K Leubner-Metzger G Mummenhoff K 2017 Fruit fracture biomechanics and the release of Lepidium didymum pericarp-imposed mechanical dormancy by fungi Nature Communications 8 Article 1868 10.1038/s41467-017-02051-9 PMC5709442 29192192 · DOI
  83. Springthorpe V Penfield S 2015 Flowering time and seed dormancy control use external coincidence to generate life history strategy eLife 4 Article 05557 10.7554/eLife.05557 PMC4378508 25824056 · DOI
  84. Stine PA Hunsaker CT 2001 An introduction to uncertainty issues for spatial data used in ecological applications Spatial uncertainty in ecology Springer New York 91 107 10.1007/978-1-4613-0209-4_5 · DOI
  85. Tabas-Madrid D Méndez-Vigo B Arteaga N Marcer A Pascual-Montano A Weigel D Xavier Picó F Alonso-Blanco C 2018 Genome-wide signatures of flowering adaptation to climate temperature: regional analyses in a highly diverse native range of Arabidopsis thaliana Plant, Cell and Environment 41 8 1806 1820 10.1111/pce.13189 29520809 · DOI
  86. Tanabata T Shibaya T Hori K Ebana K Yano M 2012 SmartGrain: high-throughput phenotyping software for measuring seed shape through image analysis Plant Physiology 160 1871 1880 10.1104/pp.112.205120 23054566 PMC3510117 · DOI
  87. Taylor GB 1981 Effect of constant temperature treatments followed by fluctuating temperatures on the softening of hard seeds of Trifolium subterraneum L Australian Journal of Plant Physiology 8 547 558
  88. Taylor GB 1996 Incidence and measurement of autumn seed softening within Medicago polymorpha L Australian Journal of Agricultural Research 47 575 586 10.1071/AR9960575 · DOI
  89. Taylor GB Hardseededness in Mediterranean annual pasture legumes in Australia: a review Australian Journal of Agricultural Research 2005 56 645 661
  90. Thompson JD 2005 Plant evolution in the Mediterranean Oxford University Press Oxford
  91. Thompson P 1970 Changes in germination responses of Silene secundiflora in relation to the climate of its habitat Physiologia Plantarum 23 739 746 10.1111/j.1399-3054.1970.tb06468.x · DOI
  92. Trněný O Brus J Hradilová I Rathore A Das RR Kopecký P Coyne CJ Reeves P Richards C Smýkal P 2018 Molecular evidence for two domestication events in the pea crop Gene 9 Article 535 10.3390/genes9110535 PMC6265838 30404223 · DOI
  93. Troszynska A Ciska E 2002 Phenolic compounds of seed coats of white and coloured varieties of pea (Pisum sativum L.) and their total antioxidant activity Czech Journal of Food Sciences 20 15 22
  94. Van Assche JA Debucquoy KLA Rommens WAF 2003 Seasonal cycles in the germination capacity of buried seeds of some Leguminosae (Fabaceae) New Phytologist 158 315 323 10.1046/j.1469-8137.2003.00744.x · DOI
  95. Van den Boogaart K Egozcue J Pawlowsky-Glahn V 2014 Bayes Hilbert spaces Australian & New Zealand Journal of Statistics 54 171 194
  96. Venable DL Bet hedging in a guild of desert annuals Ecology 2007 88 1086 1090 10.1890/06-1495 17536393 · DOI
  97. Venable DL Brown JS 1988 The selective interactions of dispersal, dormancy, and seed size as adaptations for reducing risk in variable environments American Naturalist 131 360 384 10.1086/284795 · DOI
  98. Venables WN Ripley BD 2002 Modern applied statistics with S Springer New York Fourth edition 0-387-95457-0
  99. Vidigal DS Marques ACSS Willems LAJ Buijs G Mendez-Vigo B Hilhorst HWM Bentsink L Picó FX Alonso-Blanco C 2016 Altitudinal and climatic associations of seed dormancy and flowering traits evidence adaptation of annual life cycle timing in Arabidopsis thaliana Plant Cell and Environment 39 1737 1748 10.1111/pce.12734 26991665 · DOI
  100. Vleeshouwers LM Kropff MJ Modelling field emergence patterns in arable weeds New Phytologist 2000 148 445 457 33863025
  101. Volis S Bohrer G 2013 Joint evolution of seed traits along an aridity gradient: seed size and dormancy are not two substitutable evolutionary traits in temporally heterogeneous environment New Phytologist 197 655 667 10.1111/nph.12024 23171296 · DOI
  102. Von Wettberg EB Chang PL Başdemir F Carrasquila-Garcia N Korbu LB Moenga SM Bedada G Greenlon A Moriuchi KS Singh V Cordeiro MA Noujdina NV Dinegde KN Shah Sani SGA Getahun T Vance L Bergmann E Lindsay D Mamo BE Warschefsky EJ Dacosta-Calheiros E Marques E Yilmaz MA Cakmak A Rose J Migneault A Krieg CP Saylak S Temel H Friesen ML Siler E Akhmetov Z Ozcelik H Kholova J Can C Gaur P Yildirim M Sharma H Vadez V Tesfaye K Woldemedhin AF Tar’an B Aydogan A Bukun B Penmetsa RV Berger J Kahraman A Nuzhdin SV Cook DR 2018 Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation Nature Communications 9 Article 649 10.1038/s41467-018-02867-z PMC5811434 29440741 · DOI
  103. Wada S Kennedy JA Reed BM 2011 Seed-coat anatomy and proanthocyanidins contribute to the dormancy of Rubus seed Scientia Horticulturae 130 762 768 10.1016/j.scienta.2011.08.034 · DOI
  104. Wagmann K Hautekèete NC Piquot Y Meunier C Schmitt SE Van Dijk H 2012 Seed dormancy distribution: explanatory ecological factors Annals of Botany 110 1205 1219 10.1093/aob/mcs194 22952378 PMC3478053 · DOI
  105. Warren DL Glor RE Turelli M 2008 Environmental niche equivalency versus conservatism: quantitative approaches to niche evolution Evolution 62 2868 2883 10.1111/j.1558-5646.2008.00482.x 18752605 · DOI
  106. Weitbrecht K Müller K Leubner-Metzger G 2011 First off the mark: early seed germination Journal of Experimental Botany 62 3289 3309 10.1093/jxb/err030 21430292 · DOI · Paper page
  107. Werker E Marbach I Mayer AM 1979 Relation between the anatomy of the testa, water permeability and the presence of phenolics in the genus Pisum Annals of Botany 43 765 771 10.1093/oxfordjournals.aob.a085691 · DOI
  108. Willis CG Baskin CC Baskin JM Auld JR Venable DL Cavender-Bares J Donohue K Rubio de Casas R NESCent Germination Working Group 2014 The evolution of seed dormancy: environmental cues, evolutionary hubs, and diversification of the seed plants New Phytologist 203 300 309 10.1111/nph.12782 24684268 · DOI
  109. Wilson TB Witkowski ETF 1998 Water requirements for germination and early seedling establishment in four African savanna woody plant species Journal of Arid Environments 38 541 550 10.1006/jare.1998.0362 · DOI
  110. Wyatt JE Seed coat and water absorption properties of seed of near-isogenic snap bean lines differing in seed coat color Journal American Society for Horticultural Science 1977 102 478 480
  111. Yoder JB Stanton-Geddes J Zhou P Briskine R Young ND Tiffin P 2014 Genomic signature of adaptation to climate in Medicago truncatula Genetics 196 1263 1275 10.1534/genetics.113.159319 24443444 PMC3982686 · DOI
  112. Zhang XK Yang GT Chen L Yin JM Tang ZL Li JN 2006 Physiological differences between yellow-seeded and black-seeded rapeseed (Brassica napus L.) with different testa characteristics during artificial ageing Seed Science and Technology 34 373 381 10.15258/sst.2006.34.2.13 · DOI
  113. Zhou S Sekizuka H Yang Z Sawa S Pan J 2010 Phenolics in the seed coat of wild soybean (Glycine soja) and their significance for seed hardness and seed germination Journal of Agricultural and Food Chemistry 58 10972 10978 10.1021/jf102694k 20879792 · DOI

Cited by

Sorted by citations

Authors
Hradilová, I., Duchoslav, M., Brus, J., Pechanec, V., Hýbl, M., Kopecký, P., Smržová, L., Štefelová, N., Vaclávek, T., Bariotakis, M., Machalová, J., Hron, K., Pirintsos, S., & Smýkal, P.
Affiliations
  • Palacký University Olomouc (CZ)
  • Czech Agrifood Research Center (CZ)
  • Department of Mathematical Analysis and Applications of Mathematics, Palacký University Olomouc, Olomouc, Czech Republic
  • University of Crete (GR)
Corresponding author
Smýkal, Petr
Venue
PeerJ
Publisher
PeerJ
Published
2019-01-14
Volume
7
Pages
e6263
ISSN
2167-8359 (ISSN-L)
OpenAlex
W2910381298
Cited by
52
References
0
Citations by year
2026: 1 · 2025: 7 · 2024: 6 · 2023: 7 · 2022: 9 · 2021: 9 · 2020: 10 · 2019: 3
FWCI
5.71
Type
journal article
Language
en
Open access
Locations
  • PeerJ (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • Grant Agency of the Czech Republic (16-21053S)
  • Palacký University grant Agency IGA (2018_001, 2019_004)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Seed Germination and Physiology
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Genetic and Environmental Crop Studies
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
Keywords
Pisum sativum subsp. elatius, wild pea, seed dormancy, seed germination, temperature oscillations, dormancy breaking, seed coat thickness, proanthocyanidins, bioclimatic variables, soil properties, ecological niche modeling, seed accessions, germination speed, annual temperature range, seedling establishment

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