Cuomo, Christina A.

Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses

Lockhart, S. R., Etienne, K. A., Vallabhaneni, S., Farooqi, J., Chowdhary, A., Govender, N. P., Colombo, A. L., Calvo, B., Cuomo, C. A., Desjardins, C. A., et al. (2017) · Clinical Infectious Diseases

Antifungal resistance and susceptibilityYeasts and Rust Fungi Studies

Cited by 1,662

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

Butler, G., Rasmussen, M. D., Lin, M. F., Santos, M. A. S., Sakthikumar, S., Munro, C. A., Rheinbay, E., Grabherr, M., Forche, A., Reedy, J. L., et al. (2009) · Nature

Fungal and yeast genetics researchYeasts and Rust Fungi Studies

Cited by 1,065

Tracing the evolutionary history and global expansion of Candida auris using population genomic analyses

Chow, N. A., Muñoz, J. F., Gade, L., Berkow, E., Li, X., Welsh, R. M., Forsberg, K., Lockhart, S. R., Adam, R., Alanio, A., et al. (2020) · mBio

Antifungal resistance and susceptibilityYeasts and Rust Fungi Studies

Cited by 463

Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species

Muñoz, J. F., Gade, L., Chow, N. A., Loparev, V. N., Juieng, P., Berkow, E. L., Farrer, R. A., Litvintseva, A. P., & Cuomo, C. A. (2018) · Nature Communications

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 458

The evolution of drug resistance in clinical isolates of Candida albicans.

Ford, C. B., Funt, J. M., Abbey, D., Issi, L., Guiducci, C., Martinez, D. A., Delorey, T., Li, B. Y., White, T. C., Cuomo, C., et al. (2015) · eLife

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 348

Genetic and phenotypic intra-species variation in Candida albicans

Hirakawa, M. P., Martinez, D. A., Sakthikumar, S., Anderson, M. Z., Berlin, A., Gujja, S., Zeng, Q., Zisson, E., Wang, J. M., Greenberg, J. M., et al. (2015) · Genome Research

Fungal and yeast genetics researchAntifungal resistance and susceptibility

Cited by 320

Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris

Rhodes, J., Abdolrasouli, A., Farrer, R. A., Cuomo, C. A., Aanensen, D. M., Armstrong-James, D., Fisher, M. C., & Schelenz, S. (2018) · Emerging Microbes & Infections

Antifungal resistance and susceptibilityYeasts and Rust Fungi Studies

Cited by 246

Genome-Wide Analysis of Experimentally Evolved Candida auris Reveals Multiple Novel Mechanisms of Multidrug Resistance

Carolus, H., Pierson, S., Muñoz, J. F., Subotić, A., Cruz, R. B., Cuomo, C. A., & Van Dijck, P. (2021) · mBio

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 211

Mutations in TAC1B : a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris

Rybak, J. M., Muñoz, J. F., Barker, K. S., Parker, J. E., Esquivel, B. D., Berkow, E. L., Lockhart, S. R., Gade, L., Palmer, G. E., White, T. C., et al. (2020) · mBio

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 202

Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts

D’Souza, C. A., Kronstad, J. W., Taylor, G., Warren, R., Yuen, M., Hu, G., Jung, W. H., Sham, A., Kidd, S. E., Tangen, K., et al. (2011) · mBio

Fungal Infections and StudiesPlant Pathogens and Fungal Diseases

Cited by 202

Rch1, a protein that specifically interacts with the RAG-1 recombination-activating protein

Cuomo, C. A., Kirch, S. A., Gyuris, J., Brent, R., & Oettinger, M. A. (1994) · Proceedings of the National Academy of Sciences

DNA Repair MechanismsGenomics and Chromatin Dynamics

Cited by 164

Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans

Desjardins, C. A., Giamberardino, C., Sykes, S. M., Yu, C.-H., Tenor, J. L., Chen, Y., Yang, T., Jones, A. M., Sun, S., Haverkamp, M. R., et al. (2017) · Genome Research

Fungal Infections and StudiesPlant Pathogens and Fungal Diseases

Cited by 157

Global analysis of mutations driving microevolution of a heterozygous diploid fungal pathogen

Ene, I. V., Farrer, R. A., Hirakawa, M. P., Agwamba, K., Cuomo, C. A., & Bennett, R. J. (2018) · Proceedings of the National Academy of Sciences

Evolution and Genetic DynamicsFungal and yeast genetics research

Cited by 155

Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators

Hommel, B., Mukaremera, L., Cordero, R. J. B., Coelho, C., Desjardins, C. A., Sturny-Leclère, A., Janbon, G., Perfect, J. R., Fraser, J. A., Casadevall, A., et al. (2018) · PLoS Pathogens

Fungal Infections and StudiesFungal and yeast genetics research

Cited by 143

Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance

Kim, S. H., Iyer, K. R., Pardeshi, L., Muñoz, J. F., Robbins, N., Cuomo, C. A., Wong, K. H., & Cowen, L. E. (2019) · mBio

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 136

Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris

Muñoz, J. F., Welsh, R. M., Shea, T., Batra, D., Gade, L., Howard, D., Rowe, L. A., Meis, J. F., Litvintseva, A. P., & Cuomo, C. A. (2021) · Genetics

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 125

In vivo emergence of high-level resistance during treatment reveals the first identified mechanism of amphotericin B resistance in Candida auris

Rybak, J. M., Barker, K. S., Muñoz, J. F., Parker, J. E., Ahmad, S., Mokaddas, E., Abdullah, A., Elhagracy, R. S., Kelly, S. L., Cuomo, C. A., et al. (2022) · Clinical Microbiology and Infection

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 120

The molecular and genetic basis of antifungal resistance in the emerging fungal pathogen Candida auris

Rybak, J. M., Cuomo, C. A., & David Rogers, P. (2022) · Current Opinion in Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 113

Highly recombinant VGII Cryptococcus gattii population develops clonal outbreak clusters through both sexual macroevolution and asexual microevolution

Billmyre, R. B., Croll, D., Li, W., Mieczkowski, P., Carter, D. A., Cuomo, C. A., Kronstad, J. W., & Heitman, J. (2014) · mBio

Fungal Infections and StudiesGenetic diversity and population structure

Cited by 90

Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans

Muñoz, J. F., Delorey, T., Ford, C. B., Li, B. Y., Thompson, D. A., Rao, R. P., & Cuomo, C. A. (2019) · Nature Communications

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 89

Experimental Evolution Identifies Adaptive Aneuploidy as a Mechanism of Fluconazole Resistance in Candida auris

Bing, J., Hu, T., Zheng, Q., Muñoz, J. F., Cuomo, C. A., & Huang, G. (2020) · Antimicrobial Agents and Chemotherapy

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 86

Acquired amphotericin B resistance leads to fitness trade-offs that can be mitigated by compensatory evolution in Candida auris

Carolus, H., Sofras, D., Boccarella, G., Sephton-Clark, P., Biriukov, V., Cauldron, N. C., Lobo Romero, C., Vergauwen, R., Yazdani, S., Pierson, S., et al. (2024) · Nature Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 72

Erratum for Kim et al., “Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance”

Kim, S. H., Iyer, K. R., Pardeshi, L., Muñoz, J. F., Robbins, N., Cuomo, C. A., Wong, K. H., & Cowen, L. E. (2019) · mBio

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 28

First patient-to-patient intrahospital transmission of clade I Candida auris in France revealed after a two-month incubation period

Alanio, A., Snell, H. M., Cordier, C., Desnos-Olivier, M., Dellière, S., Aissaoui, N., Sturny-Leclère, A., Da Silva, E., Eblé, C., Rouveau, M., et al. (2022) · Microbiology Spectrum

Antifungal resistance and susceptibilityInfection Control in Healthcare

Cited by 28