Zeng, Hongkui

Spatially resolved transcriptomics in neuroscience

Close, J. L., Long, B. R., & Zeng, H. (2021) · Nature Methods

Single-cell and spatial transcriptomicsMolecular Biology Techniques and Applications

Cited by 94

Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex

Chartrand, T., Dalley, R., Close, J., Goriounova, N. A., Lee, B. R., Mann, R., Miller, J. A., Molnar, G., Mukora, A., Alfiler, L., et al. (2023) · Science

Neuroscience and Neuropharmacology ResearchNeural dynamics and brain function

Cited by 88

An inducible and reversible mouse genetic rescue system

Zeng, H., Horie, K., Madisen, L., Pavlova, M. N., Gragerova, G., Rohde, A. D., Schimpf, B. A., Liang, Y., Ojala, E., Kramer, F., et al. (2008) · PLoS Genetics

Animal Genetics and ReproductionCRISPR and Genetic Engineering

Cited by 87

Distinct Transcriptomic Cell Types and Neural Circuits of the Subiculum and Prosubiculum along the Dorsal-Ventral Axis

Ding, S.-L., Yao, Z., Hirokawa, K. E., Nguyen, T. N., Graybuck, L. T., Fong, O., Bohn, P., Ngo, K., Smith, K. A., Koch, C., et al. (2020) · Cell Reports

Memory and Neural MechanismsSingle-cell and spatial transcriptomics

Cited by 82

Dense functional and molecular readout of a circuit hub in sensory cortex

Condylis, C., Ghanbari, A., Manjrekar, N., Bistrong, K., Yao, S., Yao, Z., Nguyen, T. N., Zeng, H., Tasic, B., & Chen, J. L. (2022) · Science

Neuroscience and Neuropharmacology ResearchSingle-cell and spatial transcriptomics

Cited by 81

Adeno‐Associated Viral Vectors for Anterograde Axonal Tracing with Fluorescent Proteins in Nontransgenic and Cre Driver Mice

Harris, J. A., Wook Oh, S., & Zeng, H. (2012) · Current Protocols in Neuroscience

Virus-based gene therapy researchNeuroscience and Neuropharmacology Research

Cited by 72

Subpallial Enhancer Transgenic Lines: a Data and Tool Resource to Study Transcriptional Regulation of GABAergic Cell Fate

Silberberg, S. N., Taher, L., Lindtner, S., Sandberg, M., Nord, A. S., Vogt, D., Mckinsey, G. L., Hoch, R., Pattabiraman, K., Zhang, D., et al. (2016) · Neuron

Developmental Biology and Gene RegulationNeurogenesis and neuroplasticity mechanisms

Cited by 62

Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types

Peng, H., Xie, P., Liu, L., Kuang, X., Wang, Y., Qu, L., Gong, H., Jiang, S., Li, A., Ruan, Z., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory)

Cell Image Analysis TechniquesNeuroscience and Neuropharmacology Research

Cited by 47

Molecular, spatial and projection diversity of neurons in primary motor cortex revealed by in situ single-cell transcriptomics

Zhang, M., Eichhorn, S. W., Zingg, B., Yao, Z., Zeng, H., Dong, H., & Zhuang, X. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Single-cell and spatial transcriptomicsNeuroscience and Neuropharmacology Research

Cited by 44

Systematic comparison of adeno‐associated virus and biotinylated dextran amine reveals equivalent sensitivity between tracers and novel projection targets in the mouse brain

Wang, Q., Henry, A. M., Harris, J. A., Oh, S. W., Joines, K. M., Nyhus, J., Hirokawa, K. E., Dee, N., Mortrud, M., Parry, S., et al. (2014) · Journal of Comparative Neurology

Virus-based gene therapy researchNeuroscience and Neuropharmacology Research

Cited by 44

A community-based transcriptomics classification and nomenclature of neocortical cell types

Yuste, R., Hawrylycz, M., Aalling, N., Aguilar-Valles, A., Arendt, D., Armañanzas, R., Ascoli, G. A., Bielza, C., Bokharaie, V., Bergmann, T. B., et al. (2020) · Nature Neuroscience

Single-cell and spatial transcriptomicsCell Image Analysis Techniques

Cited by 32

Intersectional mapping of multi-transmitter neurons and other cell types in the brain

Xu, J., Jo, A., DeVries, R. P., Deniz, S., Cherian, S., Sunmola, I., Song, X., Marshall, J. J., Gruner, K. A., Daigle, T. L., et al. (2022) · Cell Reports

Neuroscience and Neuropharmacology ResearchNeurobiology and Insect Physiology Research

Cited by 27