Blainey, Paul C.

Commensal Microbiota Promote Lung Cancer Development via γδ T Cells

Jin, C., Lagoudas, G. K., Zhao, C., Bullman, S., Bhutkar, A., Hu, B., Ameh, S., Sandel, D., Liang, X. S., Mazzilli, S., et al. (2019) · Cell

Cancer Immunotherapy and BiomarkersGut microbiota and health

Cited by 964

A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

Hall, A. B., Yassour, M., Sauk, J., Garner, A., Jiang, X., Arthur, T., Lagoudas, G. K., Vatanen, T., Fornelos, N., Wilson, R., et al. (2017) · Genome Medicine

Gut microbiota and healthInflammatory Bowel Disease

Cited by 777

Optical Pooled Screens in Human Cells

Feldman, D., Singh, A., Schmid-Burgk, J. L., Carlson, R. J., Mezger, A., Garrity, A. J., Zhang, F., & Blainey, P. C. (2019) · Cell

CRISPR and Genetic EngineeringNF-κB Signaling Pathways

Cited by 321

Mobile genes in the human microbiome are structured from global to individual scales

Brito, I. L., Yilmaz, S., Huang, K., Xu, L., Jupiter, S. D., Jenkins, A. P., Naisilisili, W., Tamminen, M., Smillie, C. S., Wortman, J. R., et al. (2016) · Nature

Gut microbiota and healthBacteriophages and microbial interactions

Cited by 288

The phenotypic landscape of essential human genes

Funk, L., Su, K.-C., Ly, J., Feldman, D., Singh, A., Moodie, B., Blainey, P. C., & Cheeseman, I. M. (2022) · Cell

CRISPR and Genetic EngineeringGenomics and Chromatin Dynamics

Cited by 160

Random access DNA memory using Boolean search in an archival file storage system

Banal, J. L., Shepherd, T. R., Berleant, J., Huang, H., Reyes, M., Ackerman, C. M., Blainey, P. C., & Bathe, M. (2021) · Nature Materials

DNA and Biological ComputingAdvanced biosensing and bioanalysis techniques

Cited by 143

What Is Your Conceptual Definition of “Cell Type” in the Context of a Mature Organism?

Clevers, H., Rafelski, S., Elowitz, M. B., Klein, A., Shendure, J., Trapnell, C., Lein, E., Lundberg, E. K., Uhlén, M., Martinez-Arias, A., et al. (2017) · Cell Systems

Single-cell and spatial transcriptomicsDevelopmental Biology and Gene Regulation

Cited by 108

Vaginal Lactobacillus fatty acid response mechanisms reveal a metabolite-targeted strategy for bacterial vaginosis treatment

Zhu, M., Frank, M. W., Radka, C. D., Jeanfavre, S., Xu, J., Tse, M. W., Pacheco, J. A., Kim, J. S., Pierce, K., Deik, A., et al. (2024) · Cell

Reproductive tract infections researchGut microbiota and health

Cited by 61

Pooled genetic perturbation screens with image-based phenotypes

Feldman, D., Funk, L., Le, A., Carlson, R. J., Leiken, M. D., Tsai, F., Soong, B., Singh, A., & Blainey, P. C. (2022) · Nature Protocols

CRISPR and Genetic EngineeringSingle-cell and spatial transcriptomics

Cited by 59

Lentiviral co-packaging mitigates the effects of intermolecular recombination and multiple integrations in pooled genetic screens

Feldman, D., Singh, A., Garrity, A. J., & Blainey, P. C. (2018) · bioRxiv (Cold Spring Harbor Laboratory)

Virus-based gene therapy researchCRISPR and Genetic Engineering

Cited by 49

Targeting individual cells by barcode in pooled sequence libraries

Ranu, N., Villani, A.-C., Hacohen, N., & Blainey, P. C. (2019) · Nucleic Acids Research

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 13