Knight, Rob

Human Skin, Oral, and Gut Microbiomes Predict Chronological Age

Huang, S., Haiminen, N., Carrieri, A.-P., Hu, R., Jiang, L., Parida, L., Russell, B., Allaband, C., Zarrinpar, A., Vázquez-Baeza, Y., et al. (2020) · mSystems

Gut microbiota and healthOral microbiology and periodontitis research

Cited by 167

ORIGINS OF THE GENETIC CODE: The Escaped Triplet Theory

Yarus, M., Caporaso, J. G., & Knight, R. (2005) · Annual Review of Biochemistry

RNA and protein synthesis mechanismsOrigins and Evolution of Life

Cited by 166

ReDU: a framework to find and reanalyze public mass spectrometry data

Jarmusch, A. K., Wang, M., Aceves, C. M., Advani, R. S., Aguirre, S., Aksenov, A. A., Aleti, G., Aron, A. T., Bauermeister, A., Bolleddu, S., et al. (2020) · Nature Methods

Metabolomics and Mass Spectrometry StudiesResearch Data Management Practices

Cited by 152

Intestinal transgene delivery with native E. coli chassis allows persistent physiological changes

Russell, B. J., Brown, S. D., Siguenza, N., Mai, I., Saran, A. R., Lingaraju, A., Maissy, E. S., Dantas Machado, A. C., Pinto, A. F. M., Sanchez, C., et al. (2022) · Cell

Bacterial Cancer TherapyGut microbiota and health

Cited by 151

The convergence of carbohydrate active gene repertoires in human gut microbes

Lozupone, C. A., Hamady, M., Cantarel, B. L., Coutinho, P. M., Henrissat, B., Gordon, J. I., & Knight, R. (2008) · Proceedings of the National Academy of Sciences

Gut microbiota and healthGenomics and Phylogenetic Studies

Cited by 139

Changes in vaginal microbiota following antimicrobial and probiotic therapy

Macklaim, J. M., Clemente, J. C., Knight, R., Gloor, G. B., & Reid, G. (2015) · Microbial Ecology in Health & Disease

Reproductive tract infections researchProbiotics and Fermented Foods

Cited by 134

Menopause Is Associated with an Altered Gut Microbiome and Estrobolome, with Implications for Adverse Cardiometabolic Risk in the Hispanic Community Health Study/Study of Latinos

Peters, B. A., Lin, J., Qi, Q., Usyk, M., Isasi, C. R., Mossavar-Rahmani, Y., Derby, C. A., Santoro, N., Perreira, K. M., Daviglus, M. L., et al. (2022) · mSystems

Gut microbiota and healthMenopause: Health Impacts and Treatments

Cited by 130

Gut microbiome and magnetic resonance spectroscopy study of subjects at ultra-high risk for psychosis may support the membrane hypothesis

He, Y., Kosciolek, T., Tang, J., Zhou, Y., Li, Z., Ma, X., Zhu, Q., Yuan, N., Yuan, L., Li, C., et al. (2018) · European Psychiatry

Gut microbiota and healthSchizophrenia research and treatment

Cited by 123

Effects of the microalgae Chlamydomonas on gastrointestinal health

Fields, F. J., Lejzerowicz, F., Schroeder, D., Ngoi, S. M., Tran, M., McDonald, D., Jiang, L., Chang, J. T., Knight, R., & Mayfield, S. (2020) · Journal of Functional Foods

Gut microbiota and healthSeaweed-derived Bioactive Compounds

Cited by 104

Differential Activation of Hepatic Invariant NKT Cell Subsets Plays a Key Role in Progression of Nonalcoholic Steatohepatitis

Maricic, I., Marrero, I., Eguchi, A., Nakamura, R., Johnson, C. D., Dasgupta, S., Hernandez, C. D., Nguyen, P. S., Swafford, A. D., Knight, R., et al. (2018) · The Journal of Immunology

Liver Disease Diagnosis and TreatmentLiver physiology and pathology

Cited by 92

Bacterial community changes in an industrial algae production system

Fulbright, S. P., Robbins-Pianka, A., Berg-Lyons, D., Knight, R., Reardon, K. F., & Chisholm, S. T. (2018) · Algal Research

Algal biology and biofuel productionMicrobial Community Ecology and Physiology

Cited by 91

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

Melnik, A. V., da Silva, R. R., Hyde, E. R., Aksenov, A. A., Vargas, F., Bouslimani, A., Protsyuk, I., Jarmusch, A. K., Tripathi, A., Alexandrov, T., et al. (2017) · Analytical Chemistry

Metabolomics and Mass Spectrometry StudiesGut microbiota and health

Cited by 87

A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice

Abdel-Haq, R., Schlachetzki, J. C., Boktor, J. C., Cantu-Jungles, T. M., Thron, T., Zhang, M., Bostick, J. W., Khazaei, T., Chilakala, S., Morais, L. H., et al. (2022) · eLife

Parkinson's Disease Mechanisms and TreatmentsNeuroinflammation and Neurodegeneration Mechanisms

Cited by 82

tRNA Creation by Hairpin Duplication

Widmann, J., Giulio, M. D., Yarus, M., & Knight, R. (2005) · Journal of Molecular Evolution

RNA and protein synthesis mechanismsOrigins and Evolution of Life

Cited by 81

Intermittent Hypoxia and Hypercapnia Accelerate Atherosclerosis, Partially via Trimethylamine-Oxide

Xue, J., Zhou, D., Poulsen, O., Imamura, T., Hsiao, Y.-H., Smith, T. H., Malhotra, A., Dorrestein, P., Knight, R., & Haddad, G. G. (2017) · American Journal of Respiratory Cell and Molecular Biology

Obstructive Sleep Apnea ResearchAtherosclerosis and Cardiovascular Diseases

Cited by 77

Commensal Bacteria and MAMPs Are Necessary for Stress-Induced Increases in IL-1β and IL-18 but Not IL-6, IL-10 or MCP-1

Maslanik, T., Tannura, K., Mahaffey, L., Loughridge, A. B., Benninson, L., Ursell, L., Greenwood, B. N., Knight, R., & Fleshner, M. (2012) · PLoS ONE

Gut microbiota and healthImmune Response and Inflammation

Cited by 77

Publisher Correction: The gut–liver axis and the intersection with the microbiome

Tripathi, A., Debelius, J., Brenner, D. A., Karin, M., Loomba, R., Schnabl, B., & Knight, R. (2018) · Nature Reviews Gastroenterology & Hepatology

Gut microbiota and healthAlcohol Consumption and Health Effects

Cited by 70

Size, constant sequences, and optimal selection

LEGIEWICZ, M., LOZUPONE, C., KNIGHT, R., & YARUS, M. (2005) · RNA

RNA and protein synthesis mechanismsDNA and Nucleic Acid Chemistry

Cited by 69

Abundance of correctly folded RNA motifs in sequence space, calculated on computational grids

Knight, R. (2005) · Nucleic Acids Research

RNA and protein synthesis mechanismsDNA and Nucleic Acid Chemistry

Cited by 63

Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome

Huang, S., Jiang, S., Huo, D., Allaband, C., Estaki, M., Cantu, V., Belda-Ferre, P., Vázquez-Baeza, Y., Zhu, Q., Ma, C., et al. (2021) · Microbiome

Probiotics and Fermented FoodsGut microbiota and health

Cited by 61

Finding specific RNA motifs: function in a zeptomole world?

KNIGHT, R., & YARUS, M. (2003) · RNA

RNA and protein synthesis mechanismsOrigins and Evolution of Life

Cited by 58

Nonalcoholic Steatohepatitis and HCC in a Hyperphagic Mouse Accelerated by Western Diet

Ganguly, S., Muench, G. A., Shang, L., Rosenthal, S. B., Rahman, G., Wang, R., Wang, Y., Kwon, H. C., Diomino, A. M., Kisseleva, T., et al. (2021) · Cellular and Molecular Gastroenterology and Hepatology

Liver Disease Diagnosis and TreatmentLiver physiology and pathology

Cited by 50

Cancer's second genome: Microbial cancer diagnostics and redefining clonal evolution as a multispecies process: Humans and their tumors are not aseptic, and the multispecies nature of cancer modulates clinical care and clonal evolution

Sepich‐Poore, G. D., Guccione, C., Laplane, L., Pradeu, T., Curtius, K., & Knight, R. (2022) · BioEssays

Cancer Genomics and DiagnosticsGut microbiota and health

Cited by 33

Can your microbiome tell you what to eat?

Vanamala, J. K. P., Knight, R., & Spector, T. D. (2015) · Cell Metabolism

Gut microbiota and healthNutrition, Genetics, and Disease

Cited by 20