Banfield, Jillian F.

dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication

Olm, M. R., Brown, C. T., Brooks, B., & Banfield, J. F. (2017) · The ISME Journal

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 3,031

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

The Genome Standards Consortium, Bowers, R. M., Kyrpides, N. C., Stepanauskas, R., Harmon-Smith, M., Doud, D., Reddy, T. B. K., Schulz, F., Jarett, J., Rivers, A. R., et al. (2017) · Nature Biotechnology

Genomics and Phylogenetic StudiesResearch Data Management Practices

Cited by 2,624

Community structure and metabolism through reconstruction of microbial genomes from the environment

Tyson, G. W., Chapman, J., Hugenholtz, P., Allen, E. E., Ram, R. J., Richardson, P. M., Solovyev, V. V., Rubin, E. M., Rokhsar, D. S., & Banfield, J. F. (2004) · Nature

Metal Extraction and BioleachingGenomics and Phylogenetic Studies

Cited by 2,417

Crystallization by particle attachment in synthetic, biogenic, and geologic environments

De Yoreo, J. J., Gilbert, P. U. P. A., Sommerdijk, N. A. J. M., Penn, R. L., Whitelam, S., Joester, D., Zhang, H., Rimer, J. D., Navrotsky, A., Banfield, J. F., et al. (2015) · Science

Calcium Carbonate Crystallization and InhibitionCrystallization and Solubility Studies

Cited by 2,137

A new view of the tree of life

Hug, L. A., Baker, B. J., Anantharaman, K., Brown, C. T., Probst, A. J., Castelle, C. J., Butterfield, C. N., Hernsdorf, A. W., Amano, Y., Ise, K., et al. (2016) · Nature Microbiology

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 2,039

Asgard archaea illuminate the origin of eukaryotic cellular complexity

Zaremba-Niedzwiedzka, K., Caceres, E. F., Saw, J. H., Bäckström, D., Juzokaite, L., Vancaester, E., Seitz, K. W., Anantharaman, K., Starnawski, P., Kjeldsen, K. U., et al. (2017) · Nature

Protist diversity and phylogenyOrigins and Evolution of Life

Cited by 1,226

Unusual biology across a group comprising more than 15% of domain Bacteria

Brown, C. T., Hug, L. A., Thomas, B. C., Sharon, I., Castelle, C. J., Singh, A., Wilkins, M. J., Wrighton, K. C., Williams, K. H., & Banfield, J. F. (2015) · Nature

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 1,216

Life and death in the soil microbiome: how ecological processes influence biogeochemistry

Sokol, N. W., Slessarev, E., Marschmann, G. L., Nicolas, A., Blazewicz, S. J., Brodie, E. L., Firestone, M. K., Foley, M. M., Hestrin, R., Hungate, B. A., et al. (2022) · Nature Reviews Microbiology

Soil Carbon and Nitrogen DynamicsMicrobial Community Ecology and Physiology

Cited by 1,179

Morphology development and crystal growth in nanocrystalline aggregates under hydrothermal conditions: insights from titania

Penn, R. L., & Banfield, J. F. (1999) · Geochimica et Cosmochimica Acta

TiO2 Photocatalysis and Solar CellsCalcium Carbonate Crystallization and Inhibition

Cited by 1,031

Major New Microbial Groups Expand Diversity and Alter our Understanding of the Tree of Life

Castelle, C. J., & Banfield, J. F. (2018) · Cell

Microbial Community Ecology and PhysiologyGenomics and Phylogenetic Studies

Cited by 595

inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains

Olm, M. R., Crits-Christoph, A., Bouma-Gregson, K., Firek, B. A., Morowitz, M. J., & Banfield, J. F. (2021) · Nature Biotechnology

Genomics and Phylogenetic StudiesGut microbiota and health

Cited by 537

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

Castelle, C. J., Wrighton, K. C., Thomas, B. C., Hug, L. A., Brown, C. T., Wilkins, M. J., Frischkorn, K. R., Tringe, S. G., Singh, A., Markillie, L. M., et al. (2015) · Current Biology

Microbial Community Ecology and PhysiologyGenomics and Phylogenetic Studies

Cited by 536

Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations

Castelle, C. J., Brown, C. T., Anantharaman, K., Probst, A. J., Huang, R. H., & Banfield, J. F. (2018) · Nature Reviews Microbiology

Microbial Community Ecology and PhysiologyGenomics and Phylogenetic Studies

Cited by 454

Microbial Polysaccharides Template Assembly of Nanocrystal Fibers

Chan, C. S., De Stasio, G., Welch, S. A., Girasole, M., Frazer, B. H., Nesterova, M. V., Fakra, S., & Banfield, J. F. (2004) · Science

Iron oxide chemistry and applicationsMicrobial Fuel Cells and Bioremediation

Cited by 423

Accurate and complete genomes from metagenomes

Chen, L.-X., Anantharaman, K., Shaiber, A., Eren, A. M., & Banfield, J. F. (2020) · Genome Research

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 401

Structure of the bacterial ribosome at 2 Å resolution

Watson, Z. L., Ward, F. R., Méheust, R., Ad, O., Schepartz, A., Banfield, J. F., & Cate, J. H. (2020) · eLife

RNA and protein synthesis mechanismsAdvanced Electron Microscopy Techniques and Applications

Cited by 263

Strain-resolved analysis of hospital rooms and infants reveals overlap between the human and room microbiome

Brooks, B., Olm, M. R., Firek, B. A., Baker, R., Thomas, B. C., Morowitz, M. J., & Banfield, J. F. (2017) · Nature Communications

Gut microbiota and healthInfant Nutrition and Health

Cited by 226

Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface

Probst, A. J., Weinmaier, T., Raymann, K., Perras, A., Emerson, J. B., Rattei, T., Wanner, G., Klingl, A., Berg, I. A., Yoshinaga, M., et al. (2014) · Nature Communications

Microbial Community Ecology and PhysiologyMethane Hydrates and Related Phenomena

Cited by 135

Formation of regularly interstratified serpentine-chlorite minerals by tetrahedral inversion in long-period serpentine polytypes

Banfield, J. F., & Bailey, S. W. (1996) · American Mineralogist

Clay minerals and soil interactionsMineralogy and Gemology Studies

Cited by 51

A widespread group of large plasmids in methanotrophic Methanoperedens archaea

Schoelmerich, M. C., Oubouter, H. T., Sachdeva, R., Penev, P., Amano, Y., West-Roberts, J., Welte, C. U., & Banfield, J. F. (2022) · Nature Communications

Microbial metabolism and enzyme functionAnaerobic Digestion and Biogas Production

Cited by 32

Saccharibacteria harness light energy using type-1 rhodopsins that may rely on retinal sourced from microbial hosts

Jaffe, A. L., Konno, M., Kawasaki, Y., Kataoka, C., Béjà, O., Kandori, H., Inoue, K., & Banfield, J. F. (2022) · The ISME Journal

Photoreceptor and optogenetics researchMicrobial Community Ecology and Physiology

Cited by 32

Saccharibacteria harness light energy using Type-1 rhodopsins that may rely on retinal sourced from microbial hosts

Jaffe, A. L., Konno, M., Kawasaki, Y., Kataoka, C., Béjà, O., Kandori, H., Inoue, K., & Banfield, J. F. (2022) · The ISME Journal

Photoreceptor and optogenetics researchMicrobial Community Ecology and Physiology

Cited by 32

A widespread group of large plasmids in methanotrophic Methanoperedens archaea

Schoelmerich, M. C., Ouboter, H. T., Sachdeva, R., Penev, P. I., Amano, Y., West-Roberts, J., Welte, C. U., & Banfield, J. F. (2022) · Nature Communications

Microbial metabolism and enzyme functionAnaerobic Digestion and Biogas Production

Cited by 32

Borg extrachromosomal elements of methane-oxidizing archaea have conserved and expressed genetic repertoires

Schoelmerich, M. C., Ly, L., West-Roberts, J., Shi, L.-D., Shen, C., Malvankar, N. S., Taib, N., Gribaldo, S., Woodcroft, B. J., Schadt, C. W., et al. (2024) · Nature Communications

Genomics and Phylogenetic StudiesMicrobial metabolism and enzyme function

Cited by 14