Burge, Christopher B.

Initial sequencing and analysis of the human genome

International Human Genome Sequencing Consortium, Whitehead Institute for Biomedical Research, C. F. G. R., Lander, E. S., Linton, L. M., Birren, B., Nusbaum, C., Zody, M. C., Baldwin, J., Devon, K., Dewar, K., et al. (2001) · Nature

Genomics and Phylogenetic StudiesGenetic Associations and Epidemiology

Cited by 24,216

Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets

Lewis, B. P., Burge, C. B., & Bartel, D. P. (2005) · Cell

MicroRNA in disease regulationPlant Molecular Biology Research

Cited by 11,855

Most mammalian mRNAs are conserved targets of microRNAs

Friedman, R. C., Farh, K. K.-H., Burge, C. B., & Bartel, D. P. (2009) · Genome Research

MicroRNA in disease regulationRNA Research and Splicing

Cited by 8,462

Prediction of Mammalian MicroRNA Targets

Lewis, B. P., Shih, I.-H., Jones-Rhoades, M. W., Bartel, D. P., & Burge, C. B. (2003) · Cell

MicroRNA in disease regulationPlant Molecular Biology Research

Cited by 5,199

Alternative isoform regulation in human tissue transcriptomes

Wang, E. T., Sandberg, R., Luo, S., Khrebtukova, I., Zhang, L., Mayr, C., Kingsmore, S. F., Schroth, G. P., & Burge, C. B. (2008) · Nature

RNA Research and SplicingRNA regulation and disease

Cited by 5,181

The Widespread Impact of Mammalian MicroRNAs on mRNA Repression and Evolution

Farh, K. K.-H., Grimson, A., Jan, C., Lewis, B. P., Johnston, W. K., Lim, L. P., Burge, C. B., & Bartel, D. P. (2005) · Science

MicroRNA in disease regulationRNA Research and Splicing

Cited by 1,484

Analysis and design of RNA sequencing experiments for identifying isoform regulation

Katz, Y., Wang, E. T., Airoldi, E. M., & Burge, C. B. (2010) · Nature Methods

RNA Research and SplicingGenomics and Phylogenetic Studies

Cited by 1,353

Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites

Sandberg, R., Neilson, J. R., Sarma, A., Sharp, P. A., & Burge, C. B. (2008) · Science

RNA Research and SplicingRNA and protein synthesis mechanisms

Cited by 1,349

A large-scale binding and functional map of human RNA-binding proteins

Van Nostrand, E. L., Freese, P., Pratt, G. A., Wang, X., Wei, X., Xiao, R., Blue, S. M., Chen, J.-Y., Cody, N. A. L., Dominguez, D., et al. (2020) · Nature

RNA Research and SplicingRNA regulation and disease

Cited by 1,317

c-Myc Regulates Transcriptional Pause Release

Rahl, P. B., Lin, C. Y., Seila, A. C., Flynn, R. A., McCuine, S., Burge, C. B., Sharp, P. A., & Young, R. A. (2010) · Cell

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 1,279

The microRNAs of Caenorhabditis elegans

Lim, L. P., Lau, N. C., Weinstein, E. G., Abdelhakim, A., Yekta, S., Rhoades, M. W., Burge, C. B., & Bartel, D. P. (2003) · Genes & Development

MicroRNA in disease regulationPlant Molecular Biology Research

Cited by 1,259

Vertebrate MicroRNA Genes

Lim, L. P., Glasner, M. E., Yekta, S., Burge, C. B., & Bartel, D. P. (2003) · Science

MicroRNA in disease regulationGenomics and Phylogenetic Studies

Cited by 1,217

Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues

Merkin, J., Russell, C., Chen, P., & Burge, C. B. (2012) · Science

RNA Research and SplicingGenomics and Phylogenetic Studies

Cited by 972

An Abundance of Ubiquitously Expressed Genes Revealed by Tissue Transcriptome Sequence Data

Ramsköld, D., Wang, E. T., Burge, C. B., & Sandberg, R. (2009) · PLoS Computational Biology

Genomics and Phylogenetic StudiesGene expression and cancer classification

Cited by 820

Revisiting Global Gene Expression Analysis

Lovén, J., Orlando, D. A., Sigova, A. A., Lin, C. Y., Rahl, P. B., Burge, C. B., Levens, D. L., Lee, T. I., & Young, R. A. (2012) · Cell

Gene expression and cancer classificationBioinformatics and Genomic Networks

Cited by 616

Variation in alternative splicing across human tissues

Yeo, G., Holste, D., Kreiman, G., & Burge, C. B. (2004) · Genome Biology

RNA Research and SplicingRNA regulation and disease

Cited by 584

Sequence, Structure, and Context Preferences of Human RNA Binding Proteins

Dominguez, D., Freese, P., Alexis, M. S., Su, A., Hochman, M., Palden, T., Bazile, C., Lambert, N. J., Van Nostrand, E. L., Pratt, G. A., et al. (2018) · Molecular Cell

RNA Research and SplicingRNA and protein synthesis mechanisms

Cited by 562

A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart

Kalsotra, A., Xiao, X., Ward, A. J., Castle, J. C., Johnson, J. M., Burge, C. B., & Cooper, T. A. (2008) · Proceedings of the National Academy of Sciences

RNA Research and SplicingRNA regulation and disease

Cited by 508

Transcriptome-wide Regulation of Pre-mRNA Splicing and mRNA Localization by Muscleblind Proteins

Wang, E. T., Cody, N. A. L., Jog, S., Biancolella, M., Wang, T. T., Treacy, D. J., Luo, S., Schroth, G. P., Housman, D. E., Reddy, S., et al. (2012) · Cell

RNA Research and SplicingMuscle Physiology and Disorders

Cited by 490

Direct measurement of DNA affinity landscapes on a high-throughput sequencing instrument

Nutiu, R., Friedman, R. C., Luo, S., Khrebtukova, I., Silva, D., Li, R., Zhang, L., Schroth, G. P., & Burge, C. B. (2011) · Nature Biotechnology

Genomics and Chromatin DynamicsDiffusion and Search Dynamics

Cited by 194

Cotargeting among microRNAs in the brain

Cherone, J. M., Jorgji, V., & Burge, C. B. (2019) · Genome Research

MicroRNA in disease regulationRNA Research and Splicing

Cited by 40