Tyson, Gene W.

CheckM: Assessing the Quality of Microbial Genomes Recovered from Isolates, Single Cells, and Metagenomes

Parks, D. H., Imelfort, M., Skennerton, C. T., Hugenholtz, P., & Tyson, G. W. (2015) · Genome Research

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 12,496

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

The Genome Standards Consortium, Bowers, R. M., Kyrpides, N. C., Stepanauskas, R., Harmon-Smith, M., Doud, D., Reddy, T. B. K., Schulz, F., Jarett, J., Rivers, A. R., et al. (2017) · Nature Biotechnology

Genomics and Phylogenetic StudiesResearch Data Management Practices

Cited by 2,624

Community structure and metabolism through reconstruction of microbial genomes from the environment

Tyson, G. W., Chapman, J., Hugenholtz, P., Allen, E. E., Ram, R. J., Richardson, P. M., Solovyev, V. V., Rubin, E. M., Rokhsar, D. S., & Banfield, J. F. (2004) · Nature

Metal Extraction and BioleachingGenomics and Phylogenetic Studies

Cited by 2,417

Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life

Parks, D. H., Rinke, C., Chuvochina, M., Chaumeil, P.-A., Woodcroft, B. J., Evans, P. N., Hugenholtz, P., & Tyson, G. W. (2017) · Nature Microbiology

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 1,882

CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning

Chklovski, A., Parks, D. H., Woodcroft, B. J., & Tyson, G. W. (2023) · Nature Methods

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 1,705

Nitrate-driven anaerobic oxidation of ethane and butane by bacteria

Wu, M., Li, J., Lai, C.-Y., Leu, A. O., Sun, S., Gu, R., Erler, D. V., Liu, L., Li, L., Tyson, G. W., et al. (2023) · The ISME Journal

Microbial bioremediation and biosurfactantsMicrobial metabolism and enzyme function

Cited by 23

Nitrate-driven anaerobic oxidation of ethane and butane by bacteria

Wu, M., Li, J., Lai, C.-Y., Leu, A. O., Sun, S., Gu, R., Erler, D. V., Liu, L., Li, L., Tyson, G. W., et al. (2024) · The ISME Journal

Microbial bioremediation and biosurfactantsMicrobial metabolism and enzyme function

Cited by 23