Hansen, Kasper D.

The GTEx Consortium atlas of genetic regulatory effects across human tissues

The GTEx Consortium, Aguet, F., Anand, S., Ardlie, K. G., Gabriel, S., Getz, G. A., Graubert, A., Hadley, K., Handsaker, R. E., Huang, K. H., et al. (2020) · Science

Genetic Associations and EpidemiologyRNA Research and Splicing

Cited by 5,547

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

Bullard, J. H., Purdom, E., Hansen, K. D., & Dudoit, S. (2010) · BMC Bioinformatics

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 1,680

Biases in Illumina transcriptome sequencing caused by random hexamer priming

Hansen, K. D., Brenner, S. E., & Dudoit, S. (2010) · Nucleic Acids Research

Genomics and Phylogenetic StudiesGene expression and cancer classification

Cited by 713

Removing technical variability in RNA-seq data using conditional quantile normalization

Hansen, K. D., Irizarry, R. A., & WU, Z. (2012) · Biostatistics

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 607

Determinants of telomere length across human tissues

Demanelis, K., Jasmine, F., Chen, L. S., Chernoff, M., Tong, L., Delgado, D., Zhang, C., Shinkle, J., Sabarinathan, M., Lin, H., et al. (2020) · Science

Telomeres, Telomerase, and SenescenceGenetics, Aging, and Longevity in Model Organisms

Cited by 515

A Quantitative Proteome Map of the Human Body

Jiang, L., Wang, M., Lin, S., Jian, R., Li, X., Chan, J., Dong, G., Fang, H., Robinson, A. E., Aguet, F., et al. (2020) · Cell

Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks

Cited by 458

Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data

Fortin, J.-P., & Hansen, K. D. (2015) · Genome Biology

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 333

Social environment is associated with gene regulatory variation in the rhesus macaque immune system

Tung, J., Barreiro, L. B., Johnson, Z. P., Hansen, K. D., Michopoulos, V., Toufexis, D., Michelini, K., Wilson, M. E., & Gilad, Y. (2012) · Proceedings of the National Academy of Sciences

Stress Responses and CortisolAnimal Behavior and Reproduction

Cited by 277

Sequencing technology does not eliminate biological variability

Hansen, K. D., Wu, Z., Irizarry, R. A., & Leek, J. T. (2011) · Nature Biotechnology

Genomics and Phylogenetic StudiesSingle-cell and spatial transcriptomics

Cited by 226

Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability

Rizzardi, L. F., Hickey, P. F., Rodriguez DiBlasi, V., Tryggvadóttir, R., Callahan, C. M., Idrizi, A., Hansen, K. D., & Feinberg, A. P. (2019) · Nature Neuroscience

Epigenetics and DNA MethylationGenomics and Chromatin Dynamics

Cited by 146

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Barbeira, A. N., Dickinson, S. P., Bonazzola, R., Zheng, J., Wheeler, H. E., Torres, J. M., Torstenson, E. S., Shah, K. P., Garcia, T., Edwards, T. L., et al. (2018) · Nature Communications

Genetic Associations and EpidemiologyBioinformatics and Genomic Networks

Cited by 69

DNA methylation is stable during replication and cell cycle arrest

Vandiver, A. R., Idrizi, A., Rizzardi, L., Feinberg, A. P., & Hansen, K. D. (2015) · Scientific Reports

Epigenetics and DNA MethylationGenetic Syndromes and Imprinting

Cited by 55