Sherlock, Gavin

Gene Ontology: tool for the unification of biology

Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 43,206

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

Alizadeh, A. A., Eisen, M. B., Davis, R. E., Ma, C., Lossos, I. S., Rosenwald, A., Boldrick, J. C., Sabet, H., Tran, T., Yu, X., et al. (2000) · Nature

Lymphoma Diagnosis and TreatmentBreast Cancer Treatment Studies

Cited by 9,925

Missing Value Estimation Methods for DNA Microarrays

Troyanskaya, O., Cantor, M., Sherlock, G., Brown, P., Hastie, T., Tibshirani, R., Botstein, D., & Altman, R. B. (2001) · Bioinformatics

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 4,230

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

Brazma, A., Hingamp, P., Quackenbush, J., Sherlock, G., Spellman, P., Stoeckert, C., Aach, J., Ansorge, W., Ball, C. A., Causton, H. C., et al. (2001) · Nature Genetics

Gene expression and cancer classificationResearch Data Management Practices

Cited by 4,109

GO::TermFinder–open source software for accessing gene ontology information and finding significantly enriched gene ontology terms associated with a list of genes

Boyle, E. I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J. M., & Sherlock, G. (2004) · Bioinformatics

Bioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies

Cited by 2,067

Identification of Genes Periodically Expressed in the Human Cell Cycle and Their Expression in Tumors

Whitfield, M. L., Sherlock, G., Saldanha, A. J., Murray, J. I., Ball, C. A., Alexander, K. E., Matese, J. C., Perou, C. M., Hurt, M. M., Brown, P. O., et al. (2002) · Molecular Biology of the Cell

Gene expression and cancer classificationCancer-related Molecular Pathways

Cited by 1,527

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

Butler, G., Rasmussen, M. D., Lin, M. F., Santos, M. A. S., Sakthikumar, S., Munro, C. A., Rheinbay, E., Grabherr, M., Forche, A., Reedy, J. L., et al. (2009) · Nature

Fungal and yeast genetics researchYeasts and Rust Fungi Studies

Cited by 1,065

GC-Content Normalization for RNA-Seq Data

Risso, D., Schwartz, K., Sherlock, G., & Dudoit, S. (2011) · BMC Bioinformatics

Gene expression and cancer classificationGenomics and Phylogenetic Studies

Cited by 867

The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data

Skrzypek, M. S., Binkley, J., Binkley, G., Miyasato, S. R., Simison, M., & Sherlock, G. (2017) · Nucleic Acids Research

Fungal and yeast genetics researchGenomics and Phylogenetic Studies

Cited by 455

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

Schep, A. N., Buenrostro, J. D., Denny, S. K., Schwartz, K., Sherlock, G., & Greenleaf, W. J. (2015) · Genome Research

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

Cited by 375

A Human-Curated Annotation of the Candida albicans Genome

Braun, B. R., van het Hoog, M., d'Enfert, C., Martchenko, M., Dungan, J., Kuo, A., Inglis, D. O., Uhl, M. A., Hogues, H., Berriman, M., et al. (2005) · PLoS Genetics

Fungal and yeast genetics researchGenomics and Phylogenetic Studies

Cited by 342

Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

Inglis, D. O., Binkley, J., Skrzypek, M. S., Arnaud, M. B., Cerqueira, G. C., Shah, P., Wymore, F., Wortman, J. R., & Sherlock, G. (2013) · BMC Microbiology

Microbial Natural Products and BiosynthesisFungal and yeast genetics research

Cited by 293

Gene flow contributes to diversification of the major fungal pathogen Candida albicans

Ropars, J., Maufrais, C., Diogo, D., Marcet-Houben, M., Perin, A., Sertour, N., Mosca, K., Permal, E., Laval, G., Bouchier, C., et al. (2018) · Nature Communications

Fungal and yeast genetics researchGenetic diversity and population structure

Cited by 197

Identification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors

Grant, G. D., Brooks, L., Zhang, X., Mahoney, J. M., Martyanov, V., Wood, T. A., Sherlock, G., Cheng, C., & Whitfield, M. L. (2013) · Molecular Biology of the Cell

Genomics and Chromatin DynamicsCancer-related Molecular Pathways

Cited by 179

Hunger Artists: Yeast Adapted to Carbon Limitation Show Trade-Offs under Carbon Sufficiency

Wenger, J. W., Piotrowski, J., Nagarajan, S., Chiotti, K., Sherlock, G., & Rosenzweig, F. (2011) · PLoS Genetics

Evolution and Genetic DynamicsFungal and yeast genetics research

Cited by 154

New tools at the Candida Genome Database: biochemical pathways and full-text literature search

Skrzypek, M. S., Arnaud, M. B., Costanzo, M. C., Inglis, D. O., Shah, P., Binkley, G., Miyasato, S. R., & Sherlock, G. (2010) · Nucleic Acids Research

Fungal and yeast genetics researchBioinformatics and Genomic Networks

Cited by 67

Turbidostat culture of Saccharomyces cerevisiae W303-1A under selective pressure elicited by ethanol selects for mutations in SSD1 and UTH1

Avrahami-Moyal, L., Engelberg, D., Wenger, J. W., Sherlock, G., & Braun, S. (2012) · FEMS Yeast Research

Fungal and yeast genetics researchEvolution and Genetic Dynamics

Cited by 43

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads

Martin, J., Bruno, V. M., Fang, Z., Meng, X., Blow, M., Zhang, T., Sherlock, G., Snyder, M., & Wang, Z. (2010) · BMC Genomics

Genomics and Phylogenetic StudiesRNA Research and Splicing

Cited by 0