Kinney, Justin B

Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay

Melnikov, A., Murugan, A., Zhang, X., Tesileanu, T., Wang, L., Rogov, P., Feizi, S., Gnirke, A., Callan, C. G., Kinney, J. B., et al. (2012) · Nature Biotechnology

Genomics and Chromatin DynamicsGene Regulatory Network Analysis

Cited by 711

Equitability, mutual information, and the maximal information coefficient

Kinney, J. B., & Atwal, G. S. (2014) · Proceedings of the National Academy of Sciences

Statistical Methods and InferenceStatistical Methods and Applications

Cited by 667

Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence

Kinney, J. B., Murugan, A., Callan, C. G., & Cox, E. C. (2010) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsBacterial Genetics and Biotechnology

Cited by 334

Measuring the sequence-affinity landscape of antibodies with massively parallel titration curves

Adams, R. M., Mora, T., Walczak, A. M., & Kinney, J. B. (2016) · eLife

Monoclonal and Polyclonal Antibodies Researchvaccines and immunoinformatics approaches

Cited by 137

The transcriptional cofactor TRIM33 prevents apoptosis in B lymphoblastic leukemia by deactivating a single enhancer

Wang, E., Kawaoka, S., Roe, J.-S., Shi, J., Hohmann, A. F., Xu, Y., Bhagwat, A. S., Suzuki, Y., Kinney, J. B., & Vakoc, C. R. (2015) · eLife

Genomics and Chromatin DynamicsAcute Lymphoblastic Leukemia research

Cited by 54

Gauge fixing for sequence-function relationships

Posfai, A., Zhou, J., McCandlish, D. M., & Kinney, J. B. (2024) · PLoS Computational Biology

Gene Regulatory Network AnalysisProtein Structure and Dynamics

Cited by 11