Halchenko, Yaroslav O.

SciPy 1.0: fundamental algorithms for scientific computing in Python

Virtanen, P., Gommers, R., Oliphant, T. E., Haberland, M., Reddy, T., Cournapeau, D., Burovski, E., Peterson, P., Weckesser, W., Bright, J., et al. (2020) · Nature Methods

Computational Physics and Python ApplicationsScientific Computing and Data Management

Cited by 38,430

SciPy 1.0: fundamental algorithms for scientific computing in Python

Virtanen, P., Gommers, R., Oliphant, T. E., Haberland, M., Reddy, T., Cournapeau, D., Burovski, E., Peterson, P., Weckesser, W., Bright, J., et al. (2019) · Apollo - University of Cambridge Repository

Computational Physics and Python ApplicationsScientific Computing and Data Management

Cited by 10,460

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

Gorgolewski, K. J., Auer, T., Calhoun, V. D., Craddock, R. C., Das, S., Duff, E. P., Flandin, G., Ghosh, S. S., Glatard, T., Halchenko, Y. O., et al. (2016) · Scientific Data

Research Data Management PracticesFunctional Brain Connectivity Studies

Cited by 1,775

A multimodal cell census and atlas of the mammalian primary motor cortex

BRAIN Initiative Cell Census Network (BICCN), BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Callaway, E. M., Dong, H.-W., Ecker, J. R., Hawrylycz, M. J., Huang, Z. J., Lein, E. S., Ngai, J., Osten, P., et al. (2021) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 522

Six problems for causal inference from fMRI

Ramsey, J. D., Hanson, S. J., Hanson, C., Halchenko, Y. O., Poldrack, R. A., & Glymour, C. (2010) · NeuroImage

Functional Brain Connectivity StudiesBayesian Modeling and Causal Inference

Cited by 337

Analysis of task-based functional MRI data preprocessed with fMRIPrep

Esteban, O., Ciric, R., Finc, K., Blair, R. W., Markiewicz, C. J., Moodie, C. A., Kent, J. D., Goncalves, M., DuPre, E., Gomez, D. E. P., et al. (2020) · Nature Protocols

Advanced MRI Techniques and ApplicationsFunctional Brain Connectivity Studies

Cited by 315

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging

Kennedy, D. N., Abraham, S. A., Bates, J. F., Crowley, A., Ghosh, S., Gillespie, T., Goncalves, M., Grethe, J. S., Halchenko, Y. O., Hanke, M., et al. (2019) · Frontiers in Neuroinformatics

Scientific Computing and Data ManagementResearch Data Management Practices

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