MYT1L: A systematic review of genetic variation encompassing schizophrenia and autism
Open accessAbstract
Variations in MYT1L, a gene encoding a transcription factor expressed in the brain, have been associated with autism, intellectual disability, and schizophrenia. Here we provide an updated review of published reports of neuropsychiatric correlates of loss of function and duplication of MYT1L. Of 27 duplications all were partial; 33% were associated exclusively with schizophrenia, and the chromosomal locations of schizophrenia-associated duplications exhibited a distinct difference in pattern-of-location from those associated with autism and/or intellectual disability. Of 51 published heterozygous loss of function variants, all but one were associated with intellectual disability, autism, or both, and one resulted in no neuropsychiatric diagnosis. There were no reports of schizophrenia associated with loss of function variants of MYT1L (Fisher's exact p < .00001, for contrast with all reported duplications). Although the precise function of the various mutations remains unspecified, these data collectively establish the candidacy of MYT1L as a reciprocal mutation, in which schizophrenia may be engendered by partial duplications, typically involving the 3' end of the gene, while developmental disability-notably autism-is associated with both loss of function and partial duplication. Future research on the specific effects of contrasting mutations in MYT1L may provide insight into the causal origins of autism and schizophrenia.
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Myt1L is a member of the Myt/NZF family, encodes a neuronal transcription factor with 6 zinc fingers, and its expression has only been found in brain tissue thus far.
“Myt1L is a member of the Myt/NZF family, which encodes a neuronal transcription factor with 6 zinc fingers. Its expression has only been found in brain tissue thus far [46].”
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Cites
Analysis of protein-coding genetic variation in 60,706 humans
Exome Aggregation Consortium, Lek, M., Karczewski, K. J., Minikel, E. V., Samocha, K. E., Banks, E., Fennell, T., O’Donnell-Luria, A. H., Ware, J. S., Hill, A. J., et al. (2016) · Nature · doi:10.1038/nature19057 · Cited by 9,587 · see citing works
Direct conversion of fibroblasts to functional neurons by defined factors
Vierbuchen, T., Ostermeier, A., Pang, Z. P., Kokubu, Y., Südhof, T. C., & Wernig, M. (2010) · Nature · doi:10.1038/nature08797 · Cited by 3,017 · see citing works
Synaptic, transcriptional and chromatin genes disrupted in autism
Study, T. D., De Rubeis, S., Autism, H. M. C. F., UK10K Consortium, The Autism Sequencing Consortium, He, X., Goldberg, A. P., Poultney, C. S., Samocha, K., Ercument Cicek, A., et al. (2014) · Nature · doi:10.1038/nature13772 · Cited by 2,746 · see citing works
Rare Structural Variants Disrupt Multiple Genes in Neurodevelopmental Pathways in Schizophrenia
Walsh, T., McClellan, J. M., McCarthy, S. E., Addington, A. M., Pierce, S. B., Cooper, G. M., Nord, A. S., Kusenda, M., Malhotra, D., Bhandari, A., et al. (2008) · Science · doi:10.1126/science.1155174 · Cited by 1,800 · see citing works
Rare chromosomal deletions and duplications increase risk of schizophrenia
The International Schizophrenia Consortium (2008) · Nature · doi:10.1038/nature07239 · Cited by 1,475 · see citing works
A copy number variation morbidity map of developmental delay
Cooper, G. M., Coe, B. P., Girirajan, S., Rosenfeld, J. A., Vu, T. H., Baker, C., Williams, C., Stalker, H., Hamid, R., Hannig, V., et al. (2011) · Nature Genetics · doi:10.1038/ng.909 · Cited by 1,351 · see citing works
The Database of Genomic Variants: a curated collection of structural variation in the human genome
MacDonald, J. R., Ziman, R., Yuen, R. K. C., Feuk, L., & Scherer, S. W. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt958 · Cited by 1,346 · see citing works
Induction of human neuronal cells by defined transcription factors
Pang, Z. P., Yang, N., Vierbuchen, T., Ostermeier, A., Fuentes, D., Yang, T. Q., Citri, A., Sebastiano, V., Marro, S. G., Südhof, T. C., et al. (2011) · Nature · doi:10.1038/nature10202 · Cited by 1,249 · see citing works
Genotype, haplotype and copy-number variation in worldwide human populations
Jakobsson, M., Scholz, S. W., Scheet, P. A., Gibbs, J. R., Canzoniero, J. V., Fung, H., Szpiech, Z. A., Degnan, J. H., Wang, K., Guerreiro, R. J., et al. (2008) · Nature · doi:10.1038/nature06742 · Cited by 871 · see citing works
Genetic studies in intellectual disability and related disorders
Vissers, L. E. L. M., Gilissen, C., & Veltman, J. A. (2016) · Nature Reviews Genetics · doi:10.1038/nrg3999 · Cited by 761 · see citing works
Coe, B. P., Witherspoon, K., Rosenfeld, J. A., van Bon, B. W. M., Vulto-van Silfhout, A. T., Bosco, P., Friend, K. L., Baker, C., Buono, S., Vissers, L. E. L. M., et al. (2014) · Nature Genetics · doi:10.1038/ng.3092 · Cited by 720 · see citing works
Wildeman, M., Ophuizen, E. A. A. V., den Dunnen, J. T., & Taschner, P. E. M. (2007) · Human Mutation · doi:10.1002/humu.20654 · Cited by 391 · see citing works
Support for the involvement of large copy number variants in the pathogenesis of schizophrenia.
Kirov, G., Grozeva, D., Norton, N., Ivanov, D., Mantripragada, K. K., Holmans, P., International Schizophrenia Consortium, the Wellcome Trust Case Control Consortium, Craddock, N., Owen, M. J., et al. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddp043 · Cited by 390 · see citing works
Generation of Induced Neuronal Cells by the Single Reprogramming Factor ASCL1
Chanda, S., Ang, C. E., Davila, J., Pak, C., Mall, M., Lee, Q. Y., Ahlenius, H., Jung, S. W., Südhof, T. C., & Wernig, M. (2014) · Stem Cell Reports · doi:10.1016/j.stemcr.2014.05.020 · Cited by 367 · see citing works
De novo genic mutations among a Chinese autism spectrum disorder cohort
Wang, T., Guo, H., Xiong, B., Stessman, H. A. F., Wu, H., Coe, B. P., Turner, T. N., Liu, Y., Zhao, W., Hoekzema, K., et al. (2016) · Nature Communications · doi:10.1038/ncomms13316 · Cited by 359 · see citing works
Zhou, Y., Kaiser, T., Monteiro, P., Zhang, X., Van der Goes, M. S., Wang, D., Barak, B., Zeng, M., Li, C., Lu, C., et al. (2016) · Neuron · doi:10.1016/j.neuron.2015.11.023 · Cited by 325 · see citing works
Recurrent CNVs Disrupt Three Candidate Genes in Schizophrenia Patients
Vrijenhoek, T., Buizer‐Voskamp, J. E., van der Stelt, I., Strengman, E., Sabatti, C., van Kessel, A. G., Brunner, H. G., Ophoff, R. A., & Veltman, J. A. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.09.011 · Cited by 265 · see citing works
Comparative genomics of autism and schizophrenia
Crespi, B., Stead, P., & Elliot, M. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0906080106 · Cited by 262 · see citing works
Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates
Mall, M., Kareta, M. S., Chanda, S., Ahlenius, H., Perotti, N., Zhou, B., Grieder, S. D., Ge, X., Drake, S., Euong Ang, C., et al. (2017) · Nature · doi:10.1038/nature21722 · Cited by 225 · see citing works
Predicting functional effects of missense variants in voltage-gated sodium and calcium channels
Heyne, H. O., Baez-Nieto, D., Iqbal, S., Palmer, D. S., Brunklaus, A., May, P., Collaborative, E., Johannesen, K. M., Lauxmann, S., Lemke, J. R., et al. (2020) · Science Translational Medicine · doi:10.1126/scitranslmed.aay6848 · Cited by 140 · see citing works
Copy Number Variation in Schizophrenia in the Japanese Population
Ikeda, M., Aleksić, B., Kirov, G., Kinoshita, Y., Yamanouchi, Y., Kitajima, T., Kawashima, K., Okochi, T., Kishi, T., Zaharieva, I. T., et al. (2009) · Biological Psychiatry · doi:10.1016/j.biopsych.2009.08.034 · Cited by 110 · see citing works
Blanchet, P., Bebin, M., Bruet, S., Cooper, G. M., Thompson, M. L., Duban‐Bedu, B., Gérard, B., Piton, A., Sukno, S., Deshpande, C., et al. (2017) · PLoS Genetics · doi:10.1371/journal.pgen.1006957 · Cited by 84 · see citing works
Mullé, J. G., Pulver, A. E., McGrath, J. A., Wolyniec, P. S., Dodd, A., Cutler, D. J., Sebat, J. L., Malhotra, D., Nestadt, G., Conrad, D. F., et al. (2013) · Biological Psychiatry · doi:10.1016/j.biopsych.2013.05.040 · Cited by 73 · see citing works
Neira‐Fresneda, J., & Potocki, L. (2015) · Journal of Pediatric Genetics · doi:10.1055/s-0035-1564443 · Cited by 61 · see citing works
Rocker, N. D., Vergult, S., Koolen, D. A., Jacobs, E., Hoischen, A., Zeesman, S., Bang, B., Bena, F. S., Bockaert, N., Bongers, E. M. H. F., et al. (2014) · Genetics in Medicine · doi:10.1038/gim.2014.124 · Cited by 58 · see citing works
Recurrent reciprocal copy number variants: Roles and rules in neurodevelopmental disorders
Deshpande, A., & Weiss, L. A. (2018) · Developmental Neurobiology · doi:10.1002/dneu.22587 · Cited by 58 · see citing works
MYT1L is a candidate gene for intellectual disability in patients with 2p25.3 (2pter) deletions
Stevens, S. J. C., van Ravenswaaij‐Arts, C. M. A., Janssen, J. W. H., Wassink‐Ruiter, J. S. K., van Essen, A. J., Dijkhuizen, T., van Rheenen, J., Heuts‐Vijgen, R., Stegmann, A. P. A., Smeets, E., et al. (2011) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.34274 · Cited by 57 · see citing works
Chromosomal microarray analysis in the genetic evaluation of 279 patients with syndromic obesity
D’Angelo, C. S., Varela, M. C., de Castro, C. I. E., Otto, P. A., Pérez, A. B. A., Lourenço, C. M., Kim, C. A., Bertola, D. R., Kok, F., Garcia-Alonso, L., et al. (2018) · Molecular Cytogenetics · doi:10.1186/s13039-018-0363-7 · Cited by 51 · see citing works
Early-onset obesity and paternal 2pter deletion encompassing the ACP1, TMEM18, and MYT1L genes
Doco‐Fenzy, M., Leroy, C., Schneider, A., Petit, F., Delrue, M., Andrieux, J., Perrin, L., Landais, E., Aboura, A., Puechberty, J., et al. (2013) · European Journal of Human Genetics · doi:10.1038/ejhg.2013.189 · Cited by 48 · see citing works
Microduplications disrupting the MYT1L gene (2p25.3) are associated with schizophrenia
Lee, Y., Mattai, A. A., Long, R. T. L., Rapoport, J. L., Gogtay, N., & Addington, A. M. (2012) · Psychiatric Genetics · doi:10.1097/ypg.0b013e328353ae3d · Cited by 48 · see citing works
Copy Number Variation in Thai Population
Suktitipat, B., Naktang, C., Mhuantong, W., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0104355 · Cited by 34 · see citing works
Shi, Y., Shao, Q., Li, Z., Gonzalez, G. A., Lu, F., Wang, D., Pu, Y., Huang, A., Zhao, C., He, C., et al. (2018) · Neuroscience Bulletin · doi:10.1007/s12264-018-0207-9 · Cited by 34 · see citing works
Rio, M., Royer, G., Gobin, S., de Blois, M., Ozilou, C., Bernheim, A., Nizon, M., Münnich, A., Bonnefont, J., Romana, S. P., et al. (2012) · Clinical Genetics · doi:10.1111/cge.12036 · Cited by 33 · see citing works
Meyer, K. J., Axelsen, M., Sheffield, V. C., Patil, S. R., & Wassink, T. H. (2011) · Psychiatric Genetics · doi:10.1097/ypg.0b013e32834dc3f5 · Cited by 31 · see citing works
A novel MYT1L mutation in a patient with severe early‐onset obesity and intellectual disability
Loid, P., Mäkitie, R. E., Costantini, A., Viljakainen, H. T., Pekkinen, M., & Mäkitie, O. (2018) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.40370 · Cited by 29 · see citing works
Identification of rare copy number variants in high burden schizophrenia families
Bossche, M. J. A. V. D., Stražišar, M., Cammaerts, S., Liekens, A. M. L., Vandeweyer, G., Depreeuw, V., Mattheijssens, M., Lenaerts, A., Zutter, S. D., Rijk, P. D., et al. (2013) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.32146 · Cited by 25 · see citing works
Bonaglia, M. C., Giorda, R., & Zanini, S. (2014) · Molecular Cytogenetics · doi:10.1186/1755-8166-7-53 · Cited by 23 · see citing works
Tuwaijri, A. A., & Alfadhel, M. (2019) · Journal of Pediatric Endocrinology and Metabolism · doi:10.1515/jpem-2018-0505 · Cited by 20 · see citing works
Predicting Functional Effects of Missense Variants in Voltage-Gated Sodium and Calcium ChannelsPreprint
Heyne, H., Báez-Nieto, D., Iqbal, S., Palmer, D. S., Brunklaus, A., Collaborative, T. E., Johannesen, K. M., Lauxmann, S., Lemke, J. R., Møller, R. S., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/671453 · Cited by 20 · see citing works
Copy number variation in a hospital‐based cohort of children with epilepsy
Vlaskamp, D. R. M., Callenbach, P. M. C., Rump, P., Giannini, L., Dijkhuizen, T., Brouwer, O. F., & van Ravenswaaij‐Arts, C. M. A. (2017) · Epilepsia Open · doi:10.1002/epi4.12057 · Cited by 19 · see citing works
Mayo, S., Rosello, M., Monfort, S., Oltra, S., Orellana, C., & Martı́nez, F. (2015) · Genetics in Medicine · doi:10.1038/gim.2015.86 · Cited by 13 · see citing works
Tu, X., Zeng, J., Cong, X., et al. (2014) · PubMed · doi:10.3760/cma.j.issn.1003-9406.2014.04.007 · Cited by 3 · see citing works
Braddock, A., Campo, M. D., REIFF, M. I., & Stein, M. T. (2017) · Journal of Developmental & Behavioral Pediatrics · doi:10.1097/dbp.0000000000000528 · Cited by 3 · see citing works
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- Karczewski KJ, Francioli LC, Tiao G, Cummings BB, Alföldi J, Wang Q, … MacArthur DG (2019). Variation across 141,456 human exomes and genomes reveals the spectrum of loss-of-function intolerance across human protein-coding genes. BioRxiv, 531210 10.1101/531210 · DOI · Paper page
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Weigel, B., Tegethoff, J. F., Grieder, S. D., Lim, B., Nagarajan, B., Liu, Y.-C., Truberg, J., Papageorgiou, D., Adrian-Segarra, J. M., Schmidt, L. K., et al. (2023) · Molecular Psychiatry · doi:10.1038/s41380-023-01959-7 · Cited by 31 · see citing works
- Authors
- Mansfield, P., Constantino, J. N., & Baldridge, D.
- Affiliations
- Saint Louis University (US)
- Washington University in St. Louis (US)
- Corresponding author
- Constantino, John N.
- Venue
- American Journal of Medical Genetics Part B Neuropsychiatric Genetics
- Publisher
- Wiley
- Published
- 2020-04-08
- Volume
- 183
- Issue
- 4
- Pages
- 227-233
- ISSN
- 1552-4841 (ISSN-L)
- 1552-485X
- PMC
- PMC7605444
- OpenAlex
- W3014311564
- Cited by
- 27
- References
- 43
- Citations by year
- 2026: 3 · 2025: 4 · 2024: 5 · 2023: 7 · 2022: 5 · 2021: 3
- FWCI
- 0.53
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- American Journal of Medical Genetics Part B Neuropsychiatric Genetics (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (U54HD087011)
- National Heart and Lung Institute (K12HL120002)
- National Human Genome Research Institute (K08HG010154)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomic variations and chromosomal abnormalities
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Health Sciences › Medicine › Psychiatry and Mental health › Schizophrenia research and treatment
- Keywords
- MYT1L, schizophrenia, autism spectrum disorder, intellectual disability, partial gene duplication, loss-of-function mutations, transcription factors, neuropsychiatric disorders, chromosomal location
- MeSH terms
- Autistic Disorder, Gene Expression Regulation, Humans, Intellectual Disability, Mutation, Nerve Tissue Proteins, Phenotype, Schizophrenia, Transcription Factors, Genetic Variation, Gene Deletion, Gene Duplication, Genetic Association Studies
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