Somatodendritic localization and mRNA association of the splicing regulatory protein Sam68 in the hippocampus and cortex
Abstract
The RNA‐binding protein Sam68 has been implicated in the signal‐dependent processing of pre‐mRNA and in the utilization of intron‐containing retroviral mRNAs. Sam68 is predominantly nuclear but exhibits remarkable binding affinity for signalling proteins located at the membrane. We have investigated the subcellular distribution of Sam68 in adult rat cortex and hippocampus. Subcellular fractionation showed that the protein was most abundant in nuclei but also was present at a significant level in the cytosol and membrane fractions, including light and synaptic membranes derived from crude synaptosomes. Sam68 extracted from the synaptosomal fraction cosedimented with polysomes on sucrose gradients. In agreement with these findings, immunohistochemical staining indicated that Sam68 was concentrated in neuronal nuclei but was also detectable in the soma and dendrites. Sam68 immunoreactivity examined at the ultrastructural level was found to associate with dendritic microtubules, endoplasmic reticulum, and free polyribosomes, sometimes close to synapses. A combination of immunoprecipitation and RT‐PCR directly confirmed that Sam68 was bound to polyadenylated mRNA in cortical lysates. The αCaMKII mRNA was identified as one of the coprecipitated transcripts; in contrast, the gephyrin and NR1‐1 mRNAs were not coprecipitated, indicating a certain degree of sequence specificity in the association. In electrophoretic mobility shift assays, recombinant GST‐Sam68 as well as brain‐derived Sam68 bound with high affinity to the αCaMKII 3′ untranslated region. These results suggest that Sam68 may accompany and, conceivably, regulate mature mRNAs during nuclear export, somatodendritic transport, and translation. © 2004 Wiley‐Liss, Inc.
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SAM68 is found in both the nucleus and the cytosol of many cell types and affects a variety of cellular processes, including splicing in the nucleus.
“SAM68 is found in both the nucleus and the cytosol of many cell types81 and affects a variety of cellular processes, including splicing in the nucleus82,83.”
From The neurogenetics of alternative splicing (2016) · cites this paper as [83]
Cites
Brown, V., Jin, P., Ceman, S., Darnell, J. C., O'Donnell, W. T., Tenenbaum, S. A., Jin, X., Feng, Y., Wilkinson, K. D., Keene, J. D., et al. (2001) · Cell · doi:10.1016/s0092-8674(01)00568-2 · Cited by 1,109 · see citing works
Devys, D., Lutz, Y., Rouyer, N., Bellocq, J., & Mandel, J. (1993) · Nature Genetics · doi:10.1038/ng0893-335 · Cited by 781 · see citing works
Protein synthesis at synaptic sites on dendrites.
Steward, O., & Schuman, E. (2001) · Annual Review of Neuroscience · doi:10.1146/annurev.neuro.24.1.299 · Cited by 731 · see citing works
Somogyi, P., & Takagi, H. (1982) · Neuroscience · doi:10.1016/0306-4522(82)90035-5 · Cited by 572 · see citing works
Feng, Y., Gutekunst, C.-A., Eberhart, D. E., Yi, H., Warren, S. T., & Hersch, S. M. (1997) · The Journal of Neuroscience · doi:10.1523/jneurosci.17-05-01539.1997 · Cited by 532 · see citing works
Feng, Y., Absher, D., Eberhart, D. E., Brown, V., Malter, H. E., & Warren, S. T. (1997) · Molecular Cell · doi:10.1016/s1097-2765(00)80012-x · Cited by 511 · see citing works
Miller, S., Yasuda, M., Coats, J., Jones, Y., Martone, M. E., & Mayford, M. R. (2002) · Neuron · doi:10.1016/s0896-6273(02)00978-9 · Cited by 507 · see citing works
Wu, L., Wells, D., Tay, J., Mendis, D., Abbott, M.-A., Barnitt, A., Quinlan, E., Heynen, A., Fallon, J. R., & Richter, J. D. (1998) · Neuron · doi:10.1016/s0896-6273(00)80630-3 · Cited by 488 · cited 1× · see citing works
“Several well-characterized RNA-binding proteins have been located in the somatodendritic compartment of neurons; examples include fragile X protein (Eberwine et al., 2001), Staufen (Kohrmann et al., 1999), TB-RBP/Translin (Severt et al., 1999), and CPEB (Wu et al., 1998).”
BackgroundSignal-dependent regulation of splicing via phosphorylation of Sam68
Matter, N., Herrlich, P., & König, H. (2002) · Nature · doi:10.1038/nature01153 · Cited by 458 · see citing works
An RNA-binding protein associated with Src through its SH2 and SH3 domains in mitosis
Taylor, S. J., & Shalloway, D. I. (1994) · Nature · doi:10.1038/368867a0 · Cited by 426 · see citing works
Fumagalli, S., Totty, N. F., Hsuan, J. J., & Courtneidge, S. A. (1994) · Nature · doi:10.1038/368871a0 · Cited by 365 · see citing works
Köhrmann, M., Luo, M., Kaether, C., DesGroseillers, L., Dotti, C. G., & Kiebler, M. A. (1999) · Molecular Biology of the Cell · doi:10.1091/mbc.10.9.2945 · Cited by 306 · see citing works
STAR, a gene family involved in signal transduction and activation of RNA
Vernet, C., & Artzt, K. (1997) · Trends in Genetics · doi:10.1016/s0168-9525(97)01269-9 · Cited by 301 · see citing works
Facilitation of dendritic mRNA transport by CPEBPreprint
Huang, Y., Carson, J. H., Barbarese, E., & Richter, J. D. (2003) · Genes & Development · doi:10.1101/gad.1053003 · Cited by 265 · see citing works
Corbin, F. (1997) · Human Molecular Genetics · doi:10.1093/hmg/6.9.1465 · Cited by 235 · see citing works
A role for a rat homolog of staufen in the transport of RNA to neuronal dendrites.
Tang, S.-J., Meulemans, D., Vazquez, L., Colaco, N., & Schuman, E. (2001) · Neuron · doi:10.1016/s0896-6273(01)00493-7 · Cited by 220 · see citing works
Molecular Insights into mRNA Transport and Local Translation in the Mammalian Nervous System
Kiebler, M. A., & DesGroseillers, L. (2000) · Neuron · doi:10.1016/s0896-6273(00)80868-5 · Cited by 202 · see citing works
Richard, S., Yu, D., Blumer, K., Hausladen, D., Olszowy, M. W., Connelly, P. A., & Shaw, A. S. (1995) · Molecular and Cellular Biology · doi:10.1128/mcb.15.1.186 · Cited by 196 · see citing works
Hartmann, A. M., Nayler, O., Schwaiger, F., Obermeier, A., & Stamm, S. (1999) · Molecular Biology of the Cell · doi:10.1091/mbc.10.11.3909 · Cited by 195 · see citing works
Stress-induced Nuclear Bodies Are Sites of Accumulation of Pre-mRNA Processing Factors
Denegri, M., Chiodi, I., Corioni, M., Cobianchi, F., Riva, S., & Biamonti, G. (2001) · Molecular Biology of the Cell · doi:10.1091/mbc.12.11.3502 · Cited by 190 · see citing works
Lau, L., Mammen, A. L., Ehlers, M., Kindler, S., Chung, W. J., Garner, C. C., & Huganir, R. L. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.35.21622 · Cited by 177 · see citing works
Specificity and Determinants of Sam68 RNA Binding
Lin, Q., Taylor, S. J., & Shalloway, D. I. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.43.27274 · Cited by 174 · see citing works
Reddy, T. R., Xu, W.-D., Mau, J. K. L., Goodwin, C. D., Suhasini, M., Tang, H.-L., Frimpong, K., Rose, D., & Wong-Staal, F. (1999) · Nature Medicine · doi:10.1038/9479 · Cited by 158 · see citing works
Sik (BRK) Phosphorylates Sam68 in the Nucleus and Negatively Regulates Its RNA Binding Ability
Derry, J. J., Richard, S., Carvajal, H. V., Ye, X., Vasioukhin, V. I., Cochrane, A., Chen, T., & Tyner, A. L. (2000) · Molecular and Cellular Biology · doi:10.1128/mcb.20.16.6114-6126.2000 · Cited by 158 · see citing works
A Role for the GSG Domain in Localizing Sam68 to Novel Nuclear Structures in Cancer Cell Lines
Chen, T., Boisvert, F., Bazett‐Jones, D. P., & Richard, S. (1999) · Molecular Biology of the Cell · doi:10.1091/mbc.10.9.3015 · Cited by 155 · see citing works
Li, Z., Zhang, Y., Li, D., & Feng, Y. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-13-04944.2000 · Cited by 150 · see citing works
Local translation of classes of mRNAs that are targeted to neuronal dendrites
Eberwine, J. H., Miyashiro, K., Kacharmina, J. E., & Job, C. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.121146698 · Cited by 148 · see citing works
Interaction between Sam68 and Src Family Tyrosine Kinases, Fyn and Lck, in T Cell Receptor Signaling
Fusaki, N., Iwamatsu, A., Iwashima, M., & Fujisawa, J. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.10.6214 · Cited by 112 · see citing works
The STAR protein QKI-6 is a translational repressor
Saccomanno, L., Loushin, C., Jan, E., Punkay, E., Artzt, K., & Goodwin, E. B. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.22.12605 · Cited by 111 · see citing works
Coyle, J. H., Guzik, B. W., Bor, Y.-C., Jin, L., Eisner-Smerage, L., Taylor, S. J., Rekosh, D. M., & Hammarskjöld, M. (2002) · Molecular and Cellular Biology · doi:10.1128/mcb.23.1.92-103.2003 · Cited by 104 · see citing works
Di Fruscio, M., Chen, T., & Richard, S. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.6.2710 · Cited by 99 · see citing works
The STAR/GSG Family Protein rSLM-2 Regulates the Selection of Alternative Splice Sites
Stoß, O., Olbrich, M., Hartmann, A. M., König, H., Memmott, J. E., Andreadis, A., & Stamm, S. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m006851200 · Cited by 98 · see citing works
Béchade, C., Rostaing, P., Cisterni, C., Kalisch, R., Bella, V. L., Pettmann, B., & Triller, A. (1999) · European Journal of Neuroscience · doi:10.1046/j.1460-9568.1999.00428.x · Cited by 98 · see citing works
Daoud, R., Mies, G., Smialowska, A., Oláh, L., Hossmann, K.-A., & Stamm, S. (2002) · Journal of Neuroscience · doi:10.1523/jneurosci.22-14-05889.2002 · Cited by 89 · see citing works
Angenstein, F., Evans, A. M., Settlage, R. E., Moran, S. T., Ling, S., Klintsova, A. Y., Shabanowitz, J., Hunt, D. F., & Greenough, W. T. (2002) · Journal of Neuroscience · doi:10.1523/jneurosci.22-20-08827.2002 · Cited by 81 · see citing works
Reddy, T. R., Tang, H., Xu, W., & Wong-Staal, F. (2000) · Oncogene · doi:10.1038/sj.onc.1203676 · Cited by 80 · see citing works
Severt, W. L., Biber, T. U., Wu, X., Hecht, N. B., DeLorenzo, R. J., & Jakoi, E. R. (1999) · Journal of Cell Science · doi:10.1242/jcs.112.21.3691 · Cited by 78 · see citing works
Identification of cellular mRNA targets for RNA-binding protein Sam68
Itoh, M. (2002) · Nucleic Acids Research · doi:10.1093/nar/gkf673 · Cited by 66 · see citing works
Rehbein, M., Kindler, S., Horke, S., & Richter, D. (2000) · Molecular Brain Research · doi:10.1016/s0169-328x(00)00114-5 · Cited by 64 · see citing works
Soros, V. B., Carvajal, H. V., Richard, S., & Cochrane, A. (2001) · Journal of Virology · doi:10.1128/jvi.75.17.8203-8215.2001 · Cited by 64 · see citing works
Sam68 is a docking protein linking GAP and PI3K in insulin receptor signaling
Sánchez‐Margalet, V., & Najib, S. (2001) · Molecular and Cellular Endocrinology · doi:10.1016/s0303-7207(01)00587-1 · Cited by 59 · see citing works
Fredj, N. B., Grange, J., Sadoul, R., Richard, S., Goldberg, Y., & Boyer, V. (2004) · Journal of Cell Science · doi:10.1242/jcs.00927 · Cited by 40 · see citing works
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Jabado, N., Jauliac, S., Pallier, A., Bernard, F., Fischer, A., & Hivroz, C. (1998) · The Journal of Immunology · doi:10.4049/jimmunol.161.6.2798 · Cited by 39 · see citing works
Functional interaction of Sam68 and heterogeneous nuclear ribonucleoprotein K
Yang, J.-P., Reddy, T. R., Truong, K., Suhasini, M., & Wong‐Staal, F. (2002) · Oncogene · doi:10.1038/sj.onc.1205759 · Cited by 39 · see citing works
Mohr, E., Fuhrmann, C., & Richter, D. (2001) · European Journal of Neuroscience · doi:10.1046/j.0953-816x.2001.01477.x · Cited by 12 · see citing works
RNA Transport and Local Protein Synthesis in the Dendritic Compartment
Gardiol, A., Racca, C., & Triller, A. (2001) · Results and problems in cell differentiation · doi:10.1007/978-3-540-40025-7_7 · Cited by 9 · see citing works
Fung, E. T., Lanahan, A. A., Worley, P. F., & Huganir, R. L. (1998) · FEBS Letters · doi:10.1016/s0014-5793(98)01151-x · Cited by 7 · see citing works
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Iijima, T., Wu, K., Witte, H., Hanno-Iijima, Y., Glatter, T., Richard, S., & Scheiffele, P. (2011) · Cell · doi:10.1016/j.cell.2011.11.028 · Cited by 279 · see citing works
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- Authors
- Grange, J., Boyer, V., Fabian‐Fine, R., Fredj, N. B., Sadoul, R., & Goldberg, Y.
- Affiliations
- Inserm (FR)
- Dalhousie University (CA)
- Corresponding author
- Goldberg, Yves
- Venue
- Journal of Neuroscience Research
- Publisher
- Wiley
- Published
- 2004-01-26
- Volume
- 75
- Issue
- 5
- Pages
- 654-666
- ISSN
- 0360-4012 (ISSN-L)
- 1097-4547
- OpenAlex
- W2067867820
- Cited by
- 24
- References
- 47
- Citations by year
- 2024: 1 · 2018: 2 · 2016: 2 · 2015: 1 · 2012: 1
- FWCI
- 0.47
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Journal of Neuroscience Research (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Killam Trusts
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Keywords
- Sam68, RNA-binding proteins, hippocampus, cerebral cortex, subcellular localization, synaptosomes, dendritic microtubules, polysomes, 3' untranslated region, nuclear export, mRNA transport, translational regulation
- MeSH terms
- Animals, Cell Nucleus, Cerebral Cortex, Dendrites, Hippocampus, Immunohistochemistry, Male, Neurons, Polyribosomes, Rats, Inbred Strains, RNA, Messenger, Subcellular Fractions, Synaptosomes, RNA-Binding Proteins, Calcium-Calmodulin-Dependent Protein Kinases, Protein Transport, Rats, Calcium-Calmodulin-Dependent Protein Kinase Type 2
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