Box C/D small nucleolar RNA genes and the Prader‐Willi syndrome: a complex interplay
Abstract
The nucleolus of mammalian cells contains hundreds of box C/D small nucleolar RNAs(SNORDs). Through their ability to base pair with ribosomal RNA precursors, most play important roles in the synthesis and/or activity of ribosomes, either by guiding sequence‐specific 2′‐O‐methylations or by facilitating RNA folding and cleavages. A growing number of SNORD genes with elusive functions have been discovered recently. Intriguingly, the vast majority of them are located in two large, imprinted gene clusters at human chromosome region 15q11q13 (theSNURF–SNRPNdomain) and at 14q32 (theDLK1–DIO3domain) where they are expressed, respectively, only from the paternally and maternally inherited alleles. These placental mammal‐specific SNORD genes have many features of the canonical SNORDs that guide 2′‐O‐methylations, yet they lack obvious complementarity with ribosomal RNAs and, surprisingly, they are processed from large, tandemly repeated genes expressed preferentially in the brain. This review summarizes our understanding of the biology of these peculiar SNORD genes, focusing particularly onSNORD115andSNORD116in theSNURF–SNRPNdomain. It examines the growing evidence that altered levels of these SNORDs and/or their host‐gene transcripts may be a primary cause of Prader‐Willi syndrome (PWS; a rare disorder characterized by overeating and obesity) as well as abnormalities in signaling through the 5‐HT2C serotonin receptor. Finally, the hypothesis that PWS may be a ribosomopathy (ribosomal disease) is also discussed.WIREs RNA 2017, 8:e1417. doi: 10.1002/wrna.1417 This article is categorized under:Translation > Ribosome Biogenesis RNA Processing > RNA Editing and Modification RNA in Disease and Development > RNA in Disease
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SNORD115 is expressed exclusively in brain and specifically in neurons.
“this cluster of ncRNAs is expressed exclusively in brain and specifically in neurons (Bortolin-Cavaille and Cavaille, 2012; Cavaillé, 2017; Chamberlain, 2013; Chamberlain and Lalande, 2010b; Chung et al., 2020; Keshavarz et al., 2020; Wevrick et al., 1994).”
From Small nucleolar RNAs in plasma extracellular vesicles and their discriminatory power as diagnostic biomarkers of Alzheimer's disease (2021) · cites this paper as Cavaillé, 2017
SNORD115 and SNORD116 are clustered in intronic regions of an imprinted host gene and are known to be expressed predominantly (SNORD116) or exclusively (SNORD115) in brain.
“SNORD115 and SNORD116 are clustered in intronic regions of an imprinted host gene and are known to be expressed predominantly – SNORD116, or exclusively – SNORD115, in brain (Cavaillé, 2017; Chamberlain, 2013; Chamberlain and Lalande, 2010a; Chung et al., 2020; Driedonks et al., 2018; Irimie et al., 2018; Lässer et al., 2016).”
From Small nucleolar RNAs in plasma extracellular vesicles and their discriminatory power as diagnostic biomarkers of Alzheimer's disease (2021) · cites this paper as Cavaillé, 2017
Cites
Regulation of serotonin-2C receptor G-protein coupling by RNA editing
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“Editing at the E- and C-sites plays important roles in modulating the activity of 5-HT2C receptor.(99,100,113) Strikingly, the C-site is precisely the site predicted to be targeted by SNORD115 for 20-Omethylation: the C-site is paired to the fifth nucleotide upstream of the D-box (Figure 6(a)).”
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Functional diversity of small nucleolar RNAs
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APOE2 orchestrated differences in transcriptomic and lipidomic profiles of postmortem AD brain
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- Authors
- Cavaillé, J.
- Affiliations
- Centre National de la Recherche Scientifique (FR)
- Corresponding author
- Cavaillé, Jérôme
- ORCID
- Cavaillé, Jérôme
- Venue
- WIREs RNA
- Publisher
- Wiley
- Published
- 2017-03-13
- Volume
- 8
- Issue
- 4
- ISSN
- 1757-7004 (ISSN-L)
- 1757-7012
- OpenAlex
- W2595692190
- Cited by
- 86
- References
- 4
- Citations by year
- 2026: 3 · 2025: 7 · 2024: 11 · 2023: 8 · 2022: 8 · 2021: 15 · 2020: 12 · 2019: 10 · 2018: 9 · 2017: 3
- FWCI
- 1.20
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Wiley Interdisciplinary Reviews - RNA (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Foundation for Prader-Willi Research
- Fondation pour la Recherche Médicale (DEQ20160334936)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Syndromes and Imprinting
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA modifications and cancer
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Chromosomal and Genetic Variations
- Keywords
- Prader-Willi syndrome, genomic imprinting, Dlk1-Dio3 domain, SNORD116, 2'-O-methylation, ribosomopathies, obesity, chromosome 14q32, tandemly repeated genes
- MeSH terms
- Animals, Humans, Prader-Willi Syndrome, Genomic Imprinting, RNA, Small Nucleolar
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