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Properties, production, and applications of camelid single-domain antibody fragments
Open accessAbstract
Camelids produce functional antibodies devoid of light chains of which the single N-terminal domain is fully capable of antigen binding. These single-domain antibody fragments (VHHs or Nanobodies®) have several advantages for biotechnological applications. They are well expressed in microorganisms and have a high stability and solubility. Furthermore, they are well suited for construction of larger molecules and selection systems such as phage, yeast, or ribosome display. This minireview offers an overview of (1) their properties as compared to conventional antibodies, (2) their production in microorganisms, with a focus on yeasts, and (3) their therapeutic applications.
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“Given their high-affinity, solubility and stability also in absence of the partner VL domain, the camelid VH domains (VHH) [4] and the shark VH domains called V-NAR (New Antigen Receptor) [5], are currently used as templates to generate highly efficient and stable new antibody fragments collectively termed nanobodies [6,7,8].”
From Evolution of Escherichia coli Expression System in Producing Antibody Recombinant Fragments (2020) · cites this paper as [4]
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Naturally occurring antibodies devoid of light chains
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“Sequence analysis (Hamers-Casterman et al. 1993; Muyldermans et al. 1994; Vu et al. 1997; Harmsen et al. 2000) and elucidation of the crystal structure (Desmyter et al.”
BackgroundInfluentialRapid generation of functional human IgG antibodies derived from Fab-on-phage display libraries
Jostock, T., Vanhove, M., Brepoels, E., van Gool, R., Daukandt, M., Wehnert, A., van Hegelsom, R., Dransfield, D., Sexton, D., Devlin, M., et al. (2004) · Journal of Immunological Methods · doi:10.1016/j.jim.2004.03.014 · Cited by 2,572
Engineered antibody fragments and the rise of single domains
Holliger, P., & Hudson, P. J. (2005) · Nature Biotechnology · doi:10.1038/nbt1142 · Cited by 1,928 · cited 1×
“As compared to human VH domains, the VHH FRs show a high sequence homology of more than 80%, and their 3D structures can be superimposed (Muyldermans et al. 2001; Holliger and Hudson 2005).”
BackgroundWard, E. S., Güssow, D., Griffiths, A. D., Jones, P., & Winter, G. P. (1989) · Nature · doi:10.1038/341544a0 · Cited by 1,010 · cited 2×
“Although isolated antibody heavy (Utsumi and Karush 1964) and light chains (Yoo et al. 1967) can retain antigenbinding specificity, their affinity and solubility is often reduced (Ward et al. 1989).”
BackgroundGreenberg, A. S., Avila, D. W., Hughes, M. K., Hughes, A. L., McKinney, E. C., & Flajnik, M. F. (1995) · Nature · doi:10.1038/374168a0 · Cited by 783 · cited 2×
“Although single-domain antibodies later were also identified in particular cartilaginous fish (Greenberg et al. 1995), most research on the biotechnological application of singledomain antibodies was done using camelids because of Appl Microbiol Biotechnol (2007) 77:13–22”
BackgroundSelection and identification of single domain antibody fragments from camel heavy‐chain antibodies
Ghahroudi, M. A., Desmyter, A., Wyns, L., HAMERS, R., & Muyldermans, S. (1997) · FEBS Letters · doi:10.1016/s0014-5793(97)01062-4 · Cited by 775 · cited 1×
“Methods to isolate antigen-specific VHHs from immune ( Arbabi-Ghahroudi et al. 1997; Van der Linden et al. 2000a), nonimmune (Tanha et al. 2002; Yau et al. 2003; Verheesen et al. 2006), or semisynthetic (Goldman et al. 2006) libraries using phage, yeast, or ribosome display are now well established.”
BackgroundTargeting and tracing antigens in live cells with fluorescent nanobodies
Rothbauer, U., Zolghadr, K., Tillib, S. V., Nowak, D., Schermelleh, L., Gahl, A., Backmann, N., Conrath, K., Muyldermans, S., Cardoso, M. C., et al. (2006) · Nature Methods · doi:10.1038/nmeth953 · Cited by 715 · cited 1×
“Because of their stability, VHHs are especially suited for intrabody production because this requires expression in the reducing environment of the cytoplasm (Gueorguieva et al. 2006; Rothbauer et al. 2006).”
BackgroundMolecular basis for the preferential cleft recognition by dromedary heavy-chain antibodies
Genst, E. D., Silence, K., Decanniere, K., Conrath, K., Loris, R., Kinne, J., Muyldermans, S., & Wyns, L. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0505379103 · Cited by 681 · cited 4×
“Occasionally, VHHs with affinity constants (KD) as low as 100 pM are isolated (Saerens et al. 2004; De Genst et al. 2006; Harmsen et al. 2006), which equals the affinity ceiling proposed for natural antibodies (Sundberg and Mariuzza 2002).”
BackgroundInfluentialSingle‐domain antibody fragments with high conformational stability
Dumoulin, M., Conrath, K., Meirhaeghe, A. V., Meersman, F., Heremans, K., Frenken, L. G. J., Muyldermans, S., Wyns, L., & Matagne, A. (2002) · Protein Science · doi:10.1110/ps.34602 · Cited by 641 · cited 4×
“VHHs are especially suited for oral immunotherapy because of their resistance against extremes of pH and the capacity to bind to the target at high concentrations of chaotropic agents (Dumoulin et al. 2002, 2003).”
BackgroundInfluentialStructure-Immunogenicity Relationships of Therapeutic Proteins
Hermeling, S., Crommelin, D. J. A., Schellekens, H., & Jiskoot, W. (2004) · Pharmaceutical Research · doi:10.1023/b:pham.0000029275.41323.a6 · Cited by 617 · cited 1×
“This could rely on their high sequence homology to conventional VH domains and on their high stability because aggregation of proteins is known to increase immunogenicity (Hermeling et al. 2004).”
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“Due to their size, simple structure, high antigen-binding affinity, and remarkable stability under extreme conditions, nanobodies have the potential to overcome many of the limitations of monoclonal antibodies [215].”
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“region of camelids HCAbs is known as VHH (variable domain of the heavy chain of HCAbs) or NanobodyVR (Nb; Ablynx).([4]) In contrast to camelids, immunoglobulin new antigen receptor (IgNAR) is an intra-domain disulfide bond”
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“…the prokaryotic systems, high stability in various physicochemical conditions, rapid penetration into solid tissues, and detection of hidden antigenic sites because of their small size, and lower immunogenicity in humans due to the association between human VH with VHHs (Harmsen and De Haard 2007).”
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The Development of Single Domain Antibodies for Diagnostic and Therapeutic Applications
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Challenges in developing mucosal vaccines and antibodies against infectious diarrhea in children
Tokuhara, D. (2017) · Pediatrics International · doi:10.1111/ped.13497 · Cited by 6
Half‐Life Extension through PEGylation
Jevševar, S., & Kunstelj, M. (2012) · doi:10.1002/9783527644827.ch3 · Cited by 6
Lei, E. K., Ryan, S., van Faassen, H., Foss, M., Robotham, A. C., Baltat, I., Fulton, K. M., Henry, K. A., Chen, W., & Hussack, G. (2023) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-023-12594-1 · Cited by 5
“The weaker but measurable response generated against 17978 and LAC-4 OMV preparations suggests there could be other non-CsuA/B targets recognized by the heavy-chain IgGs.”
BackgroundInfluentialFranz, L., Rubil, T., Balázs, A., Overtus, M., Kemnitz‐Hassanin, K., Govaerts, C., Mall, M. A., & Hackenberger, C. P. R. (2026) · Nature Chemical Biology · doi:10.1038/s41589-026-02199-w · Cited by 6
“To assess these effects, we used a range of biochemical and functional methods, including confocal fluorescence live-cell microscopy, flow cytometry, western blot analysis and transepithelial short-circuit current ( I sc ) measurements.”
Auditeau, C., Nguyen, T.-S., Devaux, F., Saller, F., Peyron, I., Blandinières, A., Repérant, C., Daramé, S., Denis, C. V., Lenting, P. J., et al. (2024) · Thrombosis and Haemostasis · doi:10.1055/a-2373-2829 · Cited by 5
“37 Alternatively, ZPI-sdAb2 ’ s mild procoagulant activity could also be considered as an asset for the therapeutic rebalancing of hemostasis in patients with bleeding disorders in which an over-enhancement of thrombin generation is not necessarily sought.”
Molecular engineering of nanobodies as tools in allergology: diagnostics and beyond
Aagaard, J. B., Ballegaard, A. R., Ommen, P., & Spillner, E. (2023) · Allergo Journal International · doi:10.1007/s40629-023-00261-w · Cited by 6
“Signal sequences often enable secretion into the culture medium even in bacteria and straightforward purification, making production and downstream characterization highly convenient [36, 40].”
BackgroundIdentification and In Vitro Characterization of Phage-Displayed VHHs Targeting VEGF
Farajpour, Z., Rahbarizadeh, F., Kazemi, B., Ahmadvand, D., & Mohaghegh, M. H. (2013) · SLAS DISCOVERY · doi:10.1177/1087057113514275 · Cited by 5
Chow, K. M., Whiteheart, S. W., Smiley, J. R., Sharma, S., Boaz, K., Coleman, M. J., Maynard, A., Hersh, L. B., & Kooi, C. W. V. (2019) · Journal of Visualized Experiments · doi:10.3791/58471-v · Cited by 5
Les systèmes alternatifs de production d’anticorps monoclonaux thérapeutiques
Olivier, S., & Mehtali, M. (2009) · médecine/sciences · doi:10.1051/medsci/200925121163 · Cited by 5
“La découverte en 1993 que les camélidés produisent naturellement des anticorps de forte affinité mais de petite taille, composés uniquement d’une chaîne lourde, plus résistants aux variations de température et de pH et donc plus aptes à être efficacement produits en bactéries, a relancé l’intérêt de ce système de prod…”
Nakayama, H., Murakami, A., Yoshida, M., Muraoka, J., Wakai, J., Kenjyou, N., & Ito, Y. (2016) · Monoclonal Antibodies in Immunodiagnosis and Immunotherapy · doi:10.1089/mab.2016.0003 · Cited by 5
“In contrast, the phage display method, reported by Smith et al., (10) is one tool for generating a monoclonal antibody (mAb)fragment,suchastheVHHantibodyfromtheCamelidae family, (11,12) single-chain variable fragments (scFv), and antigen-binding fragments from various animals.”
[Progress in nanobody and its application in diagnosis].
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Single-domain antibodies for functional targeting of the signaling scaffold Shoc2
Jang, H., Wilson, P. G., Sau, M., Chawla, U., Rodgers, D. W., & Galperin, E. (2019) · Molecular Immunology · doi:10.1016/j.molimm.2019.12.010 · Cited by 5
Antibody Engineering for Biosensor Applications
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Phage display and Shiga toxin neutralizers
Bernedo‐Navarro, R. A., & Yano, T. (2016) · Toxicon · doi:10.1016/j.toxicon.2016.02.009 · Cited by 5
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“Their simple architecture facilitates the construction of robust single-domain antibody libraries [94].”
Applications of Nanobodies in Biological Imaging
Sheng, L., Sheng, K., & Lü, P. (2025) · Cancer Biotherapy and Radiopharmaceuticals · doi:10.1089/cbr.2025.0005 · Cited by 4
“5,24 In contrast, Nbs, due to their small size, can address these de fi ciencies effectively.”
InfluentialProtein-based tools for the detection and characterisation of Oropouche virus infection
Merchant, M., Souza, J. D. P., Abdelkarim, S., Chakraborty, S., Neto, T. A. N., Manchay, K. I. G., Jorge, D. M. D. M., do Nascimento, V. A., Sun, Y., Caroe, E. R., et al. (2025) · EMBO Molecular Medicine · doi:10.1038/s44321-025-00291-7 · Cited by 4
“In this study, we generated a panel of Variable Heavy-chain domains of camelid Heavy-chain antibodies (VHHs; a.k.a. nanobodies) (Harmsen and De Haard, 2007) that speci fi cally detect the nucleoprotein and surface glycoprotein of OROV.”
Genetically modified helminths as pharmaceutical biofactories
Walther, D., Smout, M. J., Giacomin, P., Brindley, P. J., Mitreva, M., Moyle, M., & Loukas, A. C. (2025) · Advances in Parasitology/Advances in parasitology · doi:10.1016/bs.apar.2025.08.001 · Cited by 4
Engineering nanobodies for drug delivery systems in Alzheimer’s disease
Jootar, T., Hongeng, S., & Chiangjong, W. (2026) · Artificial Cells Nanomedicine and Biotechnology · doi:10.1080/21691401.2026.2617707 · Cited by 4
Kavousipour, S., Mohammadi, S., Eftekhar, E., Barazesh, M., & Morowvat, M. H. (2020) · Current Pharmaceutical Biotechnology · doi:10.2174/1389201021666201012162904 · Cited by 4
(Photo-)chemical roadmap to strategic antimicrobial photodynamic and photothermal therapies
Bongaerts, G. P. A., Williams, R. M., van der Wielen, M. W. J., & Feiters, M. C. (2022) · Journal of Porphyrins and Phthalocyanines · doi:10.1142/s1088424622500493 · Cited by 4
Zhang, T., Yang, D., Tang, L., & Hu, Y. (2024) · Molecular Medicine Reports · doi:10.3892/mmr.2024.13272 · Cited by 5
“…large‑scale production via prokaryotic expression systems in a matter of weeks, which allows for their swift deployment in an emergency situation (129). a nb termed nb6 has been previously reported to stabilize two adjacent rBds in the ‘down’ state after binding to S proteins, which may then…”
BackgroundZhang, Y., Tian, C., Yu, X., Yu, G., Han, X., Wang, Y., Zhou, H., Zhang, S., Li, M., Yang, T., et al. (2024) · Vaccines · doi:10.3390/vaccines12121315 · Cited by 4
Prygiel, M., Mosiej, E., Wdowiak, K., & Zasada, A. A. (2024) · Biomedicines · doi:10.3390/biomedicines12122920 · Cited by 4
“Despite their simple structure, these antibodies have unique properties such as high solubility and remarkable stability, even in extreme conditions (e.g., over a wide range of pH and temperatures) [22].”
Nanobody, New Agent for Combating Against Breast Cancer Cells
Rahbarizadeh, F., Rahimi, F. C., & Sofla, F. J. I. (2011) · InTech eBooks · doi:10.5772/22927 · Cited by 4
Production of active single-chain antibodies in seeds using trimeric polyoleosin fusion
Winichayakul, S., Pernthaner, A., Livingston, S., Cookson, R., Scott, R., & Roberts, N. (2012) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2012.07.195 · Cited by 4
Brummelhuis, W. J., Joles, J. A., Stam, J. C., Adams, H., Goldschmeding, R., Detmers, F. J. M., Khattabi, M. E., Maassen, B., Verrips, C. T., & Braam, B. G. (2010) · Shock · doi:10.1097/shk.0b013e3181cdc556 · Cited by 4
“Recently, a technique has been developed that enables easy, low-cost, large-scale selection and production of the variable domain of the heavy chain Camelidae Abs (VHH) (5).”
MethodYang, S., Li, Y., YouJun, S., Wu, J., Liu, X., Zhang, J., PEJSAK, Z., Podgórska, K., Stępniewska, K., Khan, M. U. Z., et al. (2020) · BioMed Research International · doi:10.1155/2020/3201630 · Cited by 4
“)ese advantageous properties arise from their single-domain nature and from crucial amino acid mutations in the framework 2 (FR2) region; these mutations render the overall structure of sdAbs more hydrophilic than that of conventional antibody fragments [12].”
BackgroundRuffolo, C., Ferrara, F., Trevellin, E., Cataldo, I., Fornasier, C., Pozza, A., Dell'Orto, M. C., Angriman, I., Tos, A. P. D., Bardini, R., et al. (2020) · European Surgical Research · doi:10.1159/000510266 · Cited by 4
Selection of Antibody Fragments by Yeast Display
Scholler, N. (2018) · Methods in molecular biology · doi:10.1007/978-1-4939-8648-4_12 · Cited by 4
Design of single-domain VHH antibodies to increase the binding activity in SPR amine coupling
Hirao, A., Nagatoishi, S., Ikeuchi, E., Yamawaki, T., Mori, C., Nakakido, M., & Tsumoto, K. (2023) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2023.04.048 · Cited by 4
Metadata
- Authors
- Harmsen, M. M., & De Haard, H. J.
- Affiliations
- Wageningen University & Research (NL)
- Ablynx (Belgium) (BE)
- Corresponding author
- Harmsen, M. M.
- Venue
- Applied Microbiology and Biotechnology
- Published
- 2007-08-18
- Volume
- 77
- Issue
- 1
- Pages
- 13-22
- ISSN
- 0175-7598 (ISSN-L)
- 1432-0614
- PMC
- PMC2039825
- OpenAlex
- W2147451568
- Cited by
- 809
- References
- 96
- Citations by year
- 2026: 31 · 2025: 43 · 2024: 48 · 2023: 41 · 2022: 41 · 2021: 65 · 2020: 57 · 2019: 49 · 2018: 53 · 2017: 42 · 2016: 46 · 2015: 48 · 2014: 53 · 2013: 40 · 2012: 52
- FWCI
- 2.67
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Locations
- Applied Microbiology and Biotechnology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Socio-Environmental Systems Modeling (acceptedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion, other-oa)
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Monoclonal and Polyclonal Antibodies Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein purification and stability
- Life Sciences › Agricultural and Biological Sciences › Food Science › Animal Diversity and Health Studies
- Keywords
- single-domain antibody fragments, VHH, nanobodies, camelid antibodies, recombinant antibody production, yeast expression system, phage display, ribosome display, yeast surface display, therapeutic applications
- MeSH terms
- Animals, Camelids, New World, Immunoglobulin Fragments, Immunoglobulin Heavy Chains, Models, Biological
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