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Human-in-the-loop tabular data extraction methods for historical climate data rescue
Open accessAbstract
Historical meteorological data is necessary for modeling climate scenarios, yet there remain significant challenges in archiving, extracting relevant data, organization and provision. Data rescue efforts play an important role in collecting relevant information, yet the real challenge remains in the implementation of accurate and efficient methods for extracting information from historical handwritten tabular records which are largely recorded in handwritten logbooks. The diverse tabular structures, layouts, and writing styles in these documents, along with the accessibility and varying quality of source preservation, make it impractical to rely on a single solution. In an effort to fill this gap, we propose a human-in-the-loop workflow with benchmarks of open- and closed-source methods for extracting and processing handwritten tabular data. We explain through the case of climatological data from the Congo region (1907–1960) how HIL workflows can be implemented and their trade-offs for implementing solely computationally steered models. In addition, we outline how generalized large Vision Language models have changed how HIL workflows can be implemented as to increase accuracy and precision not only with semi-automatic solutions for data provision but also prompt engineering and the necessary (historical) context to achieve optimal results.
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BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding
Devlin, J., Chang, M.-W., Lee, K., & Toutanova, K. (2018) · arXiv · doi:10.48550/arxiv.1810.04805 · Cited by 73,173
Calvin, K., Dasgupta, D., Krinner, G., Mukherji, A., Thorne, P. W., Trisos, C., Romero, J., Aldunce, P., Barret, K., Blanco, G., et al. (2023) · IPCC, 2023: Climate Change 2023: Synthesis Report. Contribution of Working Groups I, II and III to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change [Core Writing Team, H. Lee and J. Romero (eds.)]. IPCC, Geneva, Switzerland. · doi:10.59327/ipcc/ar6-9789291691647.001 · Cited by 1,581
Vision-Language Models for Vision Tasks: A Survey
Zhang, J., Huang, J., Jin, S., & Lu, S. (2024) · IEEE Transactions on Pattern Analysis and Machine Intelligence · doi:10.1109/tpami.2024.3369699 · Cited by 1,051
A survey of human-in-the-loop for machine learning
Wu, X., Xiao, L., Sun, Y., Zhang, J., Ma, T., & He, L. (2022) · Future Generation Computer Systems · doi:10.1016/j.future.2022.05.014 · Cited by 800
Intergenerational inequities in exposure to climate extremes
Thiery, W., Lange, S., Rogelj, J., Schleussner, C.-F., Gudmundsson, L., Seneviratne, S. I., Andrijevic, M., Frieler, K., Emanuel, K., Geiger, T., et al. (2021) · Science · doi:10.1126/science.abi7339 · Cited by 421
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Research works printed but not linked: 57
- Muheki, D., Deijns, A., Bevacqua, E., Messori, G., Zscheischler, J., Thiery, W.: The perfect storm? co-occurring climate extremes in East Africa. Earth Syst. Dyn. 15(2), 429–466 (2024). https://doi.org/10.5194/esd-15-429-2024 · DOI
- Seneviratne, S.I., Zhang, X., Adnan, M., Badi, W., Dereczynski, C., Luca, A.D., Ghosh, S., Iskandar, I., Kossin, J., Lewis, S., Otto, F., Pinto, I., Satoh, M., Vicente-Serrano, S.M., Wehner, M., Zhou, B.: In: Masson-Delmotte, V., Zhai, P., Pirani, A., Connors, S.L., Péan, C., Berger, S., Caud, N., Chen, Y., Goldfarb, L., Gomis, M.I., Huang, M., Leitzell, K., Lonnoy, E., Matthews, J.B.R., Maycock, T.K., Waterfield, T., Yelekçi, O., Yu, R., Zhou, B. (eds.) Weather and Climate Extreme Events in a Changing Climate. Cambridge University Press, Cambridge, UK (2023)
- Hawkins, E., Burt, S., Brohan, P., Lockwood, M., Richardson, H., Roy, M., Thomas, S.: Hourly weather observations from the Scottish highlands (1883–1904) rescued by volunteer citizen scientists. Geosci. Data J. 6(2), 160–173 (2019). https://doi.org/10.1002/gdj3.79 · DOI
- Hawkins, E., Burt, S., McCarthy, M., Murphy, C., Ross, C., Baldock, M., Brazier, J., Hersee, G., Huntley, J., Meats, R., et al.: Millions of historical monthly rainfall observations taken in the UK and Ireland rescued by citizen scientists. Geosci. Data J. 10(2), 246–261 (2023). https://doi.org/10.1002/gdj3.157 · DOI
- Brönnimann, S., Allan, R., Ashcroft, L.S.B., et al.: Unlocking pre-1850 instrumental meteorological records: A global inventory. Bull. Am. Meteorol. Soc. 100(12), 389–413 (2019). https://doi.org/10.1175/BAMS-D-19-0040.1 · DOI
- Muheki, D., Vercruysse, B., Verbruggen, C., Ntumba, D. K., Hawkins, E., Meunier, F., Imwangana, F. M., Verbeeck, H., Birkholz, J. M., Mbifo, J., et al.: Data Rescue of Millions of Daily Precipitation and Temperature Records Collected within the Congo Basin. Technical Report, Copernicus Meetings (2024) · DOI
- Kasem, M., Abdallah, A., Berendeyev, A., Elkady, E., Abdalla, M., Mahmoud, M., Hamada, M., Nurseitov, D., Taj-Eddin, I.: Deep Learning for Table Detection and Structure Recognition: A Survey (2022). https://arxiv.org/abs/2211.08469 · arXiv
- Paliwal, S., D, V., Rahul, R., Sharma, M., Vig, L.: TableNet: Deep Learning Model for End-to-End Table Detection and Tabular Data Extraction from Scanned Document Images (2020). https://arxiv.org/abs/2001.01469 · DOI
- Embley, D.W., Hurst, M., Lopresti, D., Nagy, G.: Table-processing paradigms: A research survey. Int. J. Document Anal. Recogn. 8, 66–86 (2006). https://doi.org/10.1007/s10032-006-0017-x · DOI
- Hirayama, Y.: A method for table structure analysis using dp matching. In: Proceedings of 3rd International Conference on Document Analysis and Recognition, vol. 2, pp. 583–586 (1995). IEEE · DOI
- Hu, J., Kashi, R. S., Lopresti, D. P., Wilfong, G.: Medium-independent table detection. In: Document Recognition and Retrieval VII, vol. 3967, pp. 291–302 (1999). SPIE
- Zanibbi, R., Blostein, D., Cordy, J.R.: A survey of table recognition: Models, observations, transformations, and inferences. Document Anal. Recogn. 7, 1–16 (2004)
- Goodfellow, I., Bengio, Y., Courville, A.: Deep learning mit press (2016). In: Conference on Information and Communication Systems (ICICS), pp. 151–156 (2016)
- Hao, L., Gao, L., Yi, X., Tang, Z.: A table detection method for pdf documents based on convolutional neural networks. In: 2016 12th IAPR Workshop on Document Analysis Systems (DAS), pp. 287–292 (2016). IEEE · DOI
- Augusto Borges Oliveira, D., Palhares Viana, M.: Fast cnn-based document layout analysis. In: Proceedings of the IEEE International Conference on Computer Vision Workshops, pp. 1173–1180 (2017) · DOI
- Petitpierre, R., Kramer, M., Rappo, L.: An end-to-end pipeline for historical censuses processing. Int. J. Document Anal. Recogn. 26(4), 419–432 (2023) · DOI
- Redmon, J., Farhadi, A.: Yolov3: An Incremental Improvement (2018) https://doi.org/10.48550/arXiv.1804.02767 · DOI · Paper page
- Liu, W., Anguelov, D., Erhan, D., Szegedy, C., Reed, S., Fu, C.-Y., Berg, A. C.: Ssd: Single shot multibox detector. In: European Conference on Computer Vision, pp. 21–37 (2016). Springer · DOI · Paper page
- Huang, Y., Yan, Q., Li, Y., Chen, Y., Wang, X., Gao, L., Tang, Z.: A yolo-based table detection method. In: 2019 International Conference on Document Analysis and Recognition (ICDAR), pp. 813–818 (2019). IEEE · DOI
- Kerwat, M., George, R., Shujaee, K.: Detecting knowledge artifacts in scientific document images-comparing deep learning architectures. In: 2018 Fifth International Conference on Social Networks Analysis, Management and Security (SNAMS), pp. 147–152 (2018). IEEE · DOI
- Ren, S., He, K., Girshick, R., Sun, J.: Faster r-cnn: Towards real-time object detection with region proposal networks. Adv. Neural Inf. Process. Syst. 28, 1–14 (2015)
- Li, M., Cui, L., Huang, S., Wei, F., Zhou, M., Li, Z.: Tablebank: Table benchmark for image-based table detection and recognition. In: Proceedings of the Twelfth Language Resources and Evaluation Conference, pp. 1918–1925 (2020)
- Schreiber, S., Agne, S., Wolf, I., Dengel, A., Ahmed, S.: Deepdesrt: Deep learning for detection and structure recognition of tables in document images. In: 2017 14th IAPR International Conference on Document Analysis and Recognition (ICDAR), vol. 1, pp. 1162–1167 (2017). IEEE · DOI
- Siddiqui, S.A., Malik, M.I., Agne, S., Dengel, A., Ahmed, S.: Decnt: Deep deformable CNN for table detection. IEEE Access 6, 74151–74161 (2018) · DOI
- Girshick, R., Donahue, J., Darrell, T., Malik, J.: Rich feature hierarchies for accurate object detection and semantic segmentation. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 580–587 (2014) · DOI · Paper page
- Dosovitskiy, A., Beyer, L., Kolesnikov, A., Weissenborn, D., Zhai, X., Unterthiner, T., Dehghani, M., Minderer, M., Heigold, G., Gelly, S., et al.: An image is worth 16x16 words: Transformers for image recognition at scale. arXiv preprint arXiv:2010.11929 (2020) · arXiv
- Vaswani, A., Shazeer, N., Parmar, N., Uszkoreit, J., Jones, L., Gomez, A.N., Kaiser, Ł., Polosukhin, I.: Attention is all you need. Adv. Neural Inf. Process. Syst. 30, 1–15 (2017)
- Arik, S.Ö., Pfister, T.: Tabnet: Attentive interpretable tabular learning. In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 35, pp. 6679–6687 (2021) · DOI
- Huang, X., Khetan, A., Cvitkovic, M., Karnin, Z.: Tabtransformer: Tabular data modeling using contextual embeddings. arXiv preprint arXiv:2012.06678 (2020) · arXiv
- Song, W., Shi, C., Xiao, Z., Duan, Z., Xu, Y., Zhang, M., Tang, J.: Autoint: Automatic feature interaction learning via self-attentive neural networks. In: Proceedings of the 28th ACM International Conference on Information and Knowledge Management, pp. 1161–1170 (2019) · DOI
- Singh, A., Bacchuwar, K., Bhasin, A.: A survey of OCR applications. Int. J. Mach. Learn. Comput. 2(3), 314–318 (2012). https://doi.org/10.7763/IJMLC.2012.V2.137 · DOI
- Subramani, N., Matton, A., Greaves, M., Lam, A.: A Survey of Deep Learning Approaches for OCR and Document Understanding (2020). https://arxiv.org/abs/2011.13534 · arXiv
- Memon, J., Sami, M., Khan, R.A., Uddin, M.: Handwritten optical character recognition (OCR): A comprehensive systematic literature review (SLR). IEEE Access 8, 142642–142668 (2020). https://doi.org/10.1109/ACCESS.2020.3012542 · DOI
- Ströbel, P.B., Clematide, S., Volk, M., Hodel, T.: Transformer-based HTR for Historical Documents (2022). https://arxiv.org/abs/2203.11008 · arXiv
- Romero, V., Sánchez, J. A.: The hisclima database: historical weather logs for automatic information extraction. In: 2021 16th International Conference on Document Analysis and Recognition (ICDAR), pp. 130–135 (2021). https://doi.org/10.1109/ICPR48806.2021.9412210 · DOI
- Lehenmeier, C., Burghardt, M., Mischka, B.: Layout detection and table recognition - recent challenges in digitizing historical documents and handwritten tabular data. In: Digital Libraries for Open Knowledge: 24th International Conference on Theory and Practice of Digital Libraries, TPDL 2020, pp. 229–242. Springer, New York (2020). https://doi.org/10.1007/978-3-030-54956-5_17 · DOI
- Xin, D., Ma, L., Liu, J., Macke, S., Song, S., Parameswaran, A.: Accelerating human-in-the-loop machine learning: Challenges and opportunities. In: Proceedings of the Second Workshop on Data Management for End-to-end Machine Learning, pp. 1–4 (2018) · DOI
- Brutzkus, A., Globerson, A.: Why do larger models generalize better? a theoretical perspective via the xor problem. In: International Conference on Machine Learning, pp. 822–830 (2019). PMLR
- Khan, S., Naseer, M., Hayat, M., Zamir, S.W., Khan, F.S., Shah, M.: Transformers in vision: A survey. ACM Comput. Surv. 54(10s), 1–41 (2022) · DOI · Paper page
- Everingham, M., Gool, L.V., Williams, C.K.I., Winn, J., Zisserman, A.: The pascal visual object classes (VOC) challenge. Int. J. Comput. Vis. 88(2), 303–338 (2010). https://doi.org/10.1007/s11263-009-0275-4 · DOI · Paper page
- Muheki, D., Vercruysse, B., Chandrasekar, K. K. T., Verbruggen, C., Birkholz, J. M., Hufkens, K., Verbeeck, H., Boeckx, P., Lampe, S., Hawkins, E., Thorne, P., Ntumba, D. K., Moulasa, O. K., Thiery, W.: MeteoSaver v1.0: A Machine-Learning Based Software for the Transcription of Historical Weather Data. Manuscript under review (2024) · DOI
- Baek, Y., Lee, B., Han, D., Yun, S., Lee, H.: Character region awareness for text detection. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 9365–9374 (2019) · DOI
- Ngubane, T., Tapamo, J.-R.: Tableextractnet: A model of automatic detection and recognition of table structures from unstructured documents. IEEE Access 12, 12345–12356 (2024). https://doi.org/10.3390/informatics11040077 · DOI
- Xue, W., Yu, B., Wang, W., Tao, D., Li, Q.: TGRNet: A table graph reconstruction network for table structure recognition. In: Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV), pp. 1295–1303 (2021). https://doi.org/10.1109/ICCV48922.2021.00132 · DOI
- Rakshit, S., Kundu, A., Maity, M., Mandal, S., Sarkar, S., Basu, S.: Recognition of handwritten Roman Numerals using Tesseract open source OCR engine (2010). https://arxiv.org/abs/1003.5898 · arXiv
- Puigcerver, J.: Are multidimensional recurrent layers really necessary for handwritten text recognition? In: 2017 14th IAPR International Conference on Document Analysis and Recognition (ICDAR), vol. 01, pp. 67–72 (2017). https://doi.org/10.1109/ICDAR.2017.20 · DOI
- Hassani, H., Silva, E. S.: The role of chatgpt in data science: How ai-assisted conversational interfaces are revolutionizing the field. Big Data Cogn. Comput. 7(2) (2023) https://doi.org/10.3390/bdcc7020062 · DOI · Paper page
- Shi, Y., Peng, D., Liao, W., Lin, Z., Chen, X., Liu, C., Zhang, Y., Jin, L.: Exploring OCR Capabilities of GPT-4V(ision) : A Quantitative and In-depth Evaluation (2023). https://arxiv.org/abs/2310.16809 · arXiv
- Azaria, A., Azoulay, R., Reches, S.: ChatGPT is a remarkable tool-for experts. Data Intell. 6(1), 240–296 (2024). https://doi.org/10.1162/dint_a_00235 · DOI
- Wang, J., Liu, Z., Zhao, L., Wu, Z., Ma, C., Yu, S., Dai, H., Yang, Q., Liu, Y., Zhang, S., Shi, E., Pan, Y., Zhang, T., Zhu, D., Li, X., Jiang, X., Ge, B., Yuan, Y., Shen, D., Liu, T., Zhang, S.: Review of Large Vision Models and Visual Prompt Engineering. arXiv preprint arXiv:2307.00855 (2023) https://doi.org/10.48550/arXiv.2307.00855 · DOI
- Walker, J., Fujii, Y., Popat, A. C.: A web-based ocr service for documents. In: Proceedings of the 13th IAPR International Workshop on Document Analysis Systems (DAS), Vienna, Austria, vol. 1 (2018)
- Vijayarani, S., Sakila, A.: Performance comparison of OCR tools. Int. J. UbiComp (IJU) 6(3), 19–30 (2015) · DOI
- Tafti, A. P., Baghaie, A., Assefi, M., Arabnia, H. R., Yu, Z., Peissig, P.: Ocr as a service: an experimental evaluation of google docs ocr, tesseract, abbyy finereader, and transym. In: Advances in Visual Computing: 12th International Symposium, ISVC 2016, Las Vegas, NV, USA, December 12-14, 2016, Proceedings, Part I 12, pp. 735–746 (2016). Springer · DOI
- Nockels, J., Gooding, P., Ames, S., Terras, M.: Understanding the application of handwritten text recognition technology in heritage contexts: A systematic review of transkribus in published research. Archival J. (2022). https://doi.org/10.1007/s10502-022-09397-0 · DOI
- Nockels, J., Gooding, P., Terras, M.: Are Digital Humanities platforms facilitating sufficient diversity in research? A study of the Transkribus Scholarship Programme. Digi. Scholar. Human., 018 (2024) https://doi.org/10.1093/llc/fqae018 · DOI
- Probor, G.: From digitization and images to text and content: Transkribus as a case study. Manuscript Stud. J. Schoenberg Inst. Manuscript Stud. (2024). https://doi.org/10.1353/mns.2024.a930877 · DOI
- Li, M., Lv, T., Cui, L., Lu, Y., Florêncio, D.A.F., Zhang, C., Li, Z., Wei, F.: Trocr: Transformer-based optical character recognition with pre-trained models. CoRR (2021). https://doi.org/10.48550/arXiv.2109.10282 · DOI
Cited by
Sorted by citations
MeteoSaver v1.0: a machine-learning based software for the transcription of historical weather data
Muheki, D., Vercruysse, B., Chandrasekar, K. K. T., Verbruggen, C., Birkholz, J. M., Hufkens, K., Verbeeck, H., Boeckx, P., Lampe, S., Hawkins, E., et al. (2026) · Geoscientific Model Development · doi:10.5194/gmd-19-3213-2026 · Cited by 3
Metadata
- Authors
- Vercruysse, B., Birkholz, J. M., Chandrasekar, K. K. T., Muheki, D., Thiery, W., Verbeeck, H., Hufkens, K., Jacobsen, K., & Verbruggen, C.
- Affiliations
- Ghent University (BE)
- Royal Library of Belgium (BE)
- Royal Museums of Art and History (BE)
- Vrije Universiteit Brussel (BE)
- BlueGreen Labs (bv) (Belgium) (BE)
- Royal Museum for Central Africa (BE)
- Corresponding author
- Vercruysse, Bas
- ORCID
- Venue
- International Journal on Document Analysis and Recognition (IJDAR)
- Published
- 2025-05-08
- Volume
- 29
- Issue
- 1
- Pages
- 61-75
- ISSN
- 1433-2825 (ISSN-L)
- 1433-2833
- OpenAlex
- W4410144136
- Cited by
- 5
- References
- 5
- Citations by year
- 2026: 5
- FWCI
- 1.76
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- International Journal on Document Analysis and Recognition (IJDAR) (publishedVersion, cc-by-nc-nd)
- Ghent University Academic Bibliography (Ghent University) (publishedVersion)
- Lirias (submittedVersion, cc-by-nc-nd)
- VUBIR (Vrije Universiteit Brussel) (submittedVersion, cc-by-nc-nd)
- Ghent University Academic Bibliography (Ghent University) (submittedVersion, other-oa)
- Funders
- Fonds Wetenschappelijk Onderzoek (I000921N, FWOTM1151)
- Belgian Federal Science Policy Office (BR/175/A3/COBECORE)
- Topics
- Physical Sciences › Computer Science › Computer Vision and Pattern Recognition › Handwritten Text Recognition Techniques
- Social Sciences › Arts and Humanities › Literature and Literary Theory › Digital Humanities and Scholarship
- Physical Sciences › Computer Science › Information Systems › Research Data Management Practices
- Keywords
- human-in-the-loop, tabular data extraction, historical meteorological data, climate data rescue, vision-language models, prompt engineering
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