Cited by 29Heavy Metal Pollution RemediationAdsorption and biosorption for pollutant removalChromium effects and bioremediation

The DOI matches its Crossref record.

Synergistic effects of indigenous bacterial consortia on heavy metal tolerance and reduction

Khidr, Rahel, Qurbani, Karzan, Muhammed, Vania, Salim, Sazgar, Abdulla, Shajwan, Wsw, Hevy·2025·Environmental Geochemistry and Health

Abstract

Heavy metal contamination represents a critical environmental and public health challenge, necessitating effective remediation approaches. This study examines the bioremediation potential of three indigenous bacterial strains Aeromonas caviae KQ_21, Aeromonas hydrophila AUoR_24, and Shewanella putrefaciens SUoR_24 evaluated both individually and in consortia for their capacity to remove heavy metals. Tolerance assessments demonstrated that the coculture of these strains exhibited superior resistance to copper (Cu), zinc (Zn), and nickel (Ni), with optimal growth observed up to 6 mM for Cu, 9 mM for Zn, and 5 mM for Ni, outperforming the monocultures. The co-culture system also achieved higher metal reduction efficiencies, with reductions of 47.02% for Cu, 61.49% for Ni, and 61.93% for Zn, in contrast to lower reductions observed in individual strains. The study further explored the impact of environmental conditions on bioremediation efficiency. Optimal temperature for both monoculture and coculture setups was found to be 30 °C. pH and salt concentration variations significantly affected bacterial growth and metal reduction, highlighting the necessity of tailored conditions for enhanced bioremediation. In terms of metal removal mechanisms, the results demonstrated that nickel (Ni) removal occurred primarily through bioaccumulation, while copper (Cu) removal involved both biosorption and bioaccumulation. Zinc (Zn) removal was facilitated through biosorption, bioaccumulation, a…

Overview

Integrity signals

Registry

Crossref · 10.1007/s10653-025-02392-1

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 59

  1. Ahmed, S. K., Hussein, S., Qurbani, K., Ibrahim, R. H., Fareeq, A., Mahmood, K. A., & Mohamed, M. G. (2024). Antimicrobial resistance: Impacts, challenges, and future prospects. Journal of Medicine, Surgery, and Public Health, 2, 100081. https://doi.org/10.1016/j.glmedi.2024.100081 · DOI
  2. Ali, A., Nazar, M., Mustafa, R., Hussein, S., Qurbani, K., & Ahmed, S. (2023). Impact of heavy metals on breast cancer (Review). World Academy of Sciences Journal, 6(1), 4. https://doi.org/10.3892/wasj.2023.219 · DOI
  3. Alkhatib, M. F., Alam, Z., Muyibi, S. A., & Husain, A. F. (2011). An isolated bacterial consortium for crude oil biodegradation. African Journal of Biotechnology, 10(81), 18763–18767.
  4. Awadeen, N. A., Eltarahony, M., Zaki, S., Yousef, A., El-Assar, S., & El-Shall, H. (2024). Fungal carbonatogenesis process mediates zinc and chromium removal via statistically optimized carbonic anhydrase enzyme. Microbial Cell Factories, 23(1), 236. https://doi.org/10.1186/s12934-024-02499-7 · DOI
  5. Babar, Z., Khan, M., Chotana, G. A., Murtaza, G., & Shamim, S. (2021). Evaluation of the potential role of bacillus altitudinis MT422188 in nickel bioremediation from contaminated industrial effluents. Sustainability, 13(13), 7353. https://doi.org/10.3390/su13137353 · DOI
  6. Balali-Mood, M., Naseri, K., Tahergorabi, Z., Khazdair, M. R., & Sadeghi, M. (2021). Toxic mechanisms of five heavy metals: mercury, lead, chromium, cadmium, and arsenic. Frontiers in Pharmacology. https://doi.org/10.3389/fphar.2021.643972 · DOI
  7. Canellas, A. L. B., & Laport, M. S. (2023). The biotechnological potential of Aeromonas: A bird’s eye view. Critical Reviews in Microbiology, 49(5), 543–555. https://doi.org/10.1080/1040841X.2022.2083940 · DOI
  8. Cao, Z., Yan, W., Ding, M., & Yuan, Y. (2022). Construction of microbial consortia for microbial degradation of complex compounds. Frontiers in Bioengineering and Biotechnology. https://doi.org/10.3389/fbioe.2022.1051233 · DOI · Paper page
  9. Carpi, A. (2011). Progress in molecular and environmental bioengineering: from analysis and modeling to technology applications. BoD–Books on Demand. · DOI
  10. Cases, I., & De Lorenzo, V. (2005). Promoters in the environment: Transcriptional regulation in its natural context. Nature Reviews Microbiology, 3(2), 105–118. · DOI
  11. Chandrangsu, P., Rensing, C., & Helmann, J. D. (2017). Metal homeostasis and resistance in bacteria. Nature Reviews Microbiology, 15(6), 338–350. https://doi.org/10.1038/nrmicro.2017.15 · DOI · Paper page
  12. Das, S., Dash, H. R., & Chakraborty, J. (2016). Genetic basis and importance of metal resistant genes in bacteria for bioremediation of contaminated environments with toxic metal pollutants. Applied Microbiology and Biotechnology, 100(7), 2967–2984. https://doi.org/10.1007/s00253-016-7364-4 · DOI
  13. Duncker, K. E., Holmes, Z. A., & You, L. (2021). Engineered microbial consortia: Strategies and applications. Microbial Cell Factories, 20, 211. https://doi.org/10.1186/s12934-021-01699-9 · DOI · Paper page
  14. El-Gamal, E. H., Rashad, M., Saleh, M. E., Zaki, S., & Eltarahony, M. (2023). Potential bioremediation of lead and phenol by sunflower seed husk and rice straw-based biochar hybridized with bacterial consortium: A kinetic study. Scientific Reports, 13(1), 21901. https://doi.org/10.1038/s41598-023-49036-x · DOI
  15. Eltarahony, M., El-deeb, N., Abu-Serie, M., & El-Shall, H. (2024). Biovalorization of whey waste as economic nutriment for mycogenic production of single cell oils with promising antibiofilm and anticancer potentiality. Journal of Biological Engineering, 18(1), 62. https://doi.org/10.1186/s13036-024-00455-y · DOI
  16. Eltarahony, M., El-Fakharany, E., Abu-Serie, M., ElKady, M., & Ibrahim, A. (2021a). Statistical modeling of methylene blue degradation by yeast-bacteria consortium; optimization via agro-industrial waste, immobilization and application in real effluents. Microbial Cell Factories, 20(1), 234. https://doi.org/10.1186/s12934-021-01730-z · DOI
  17. Eltarahony, M., Kamal, A., Zaki, S., & Abd-El-Haleem, D. (2021b). Heavy metals bioremediation and water softening using ureolytic strains Metschnikowia pulcherrima and Raoultella planticola. Journal of Chemical Technology & Biotechnology, 96(11), 3152–3165. https://doi.org/10.1002/jctb.6868 · DOI
  18. Eltarahony, M., Zaki, S., & Abd-El-Haleem, D. (2020). Aerobic and anaerobic removal of lead and mercury via calcium carbonate precipitation mediated by statistically optimized nitrate reductases. Scientific Reports, 10(1), 4029. https://doi.org/10.1038/s41598-020-60951-1 · DOI
  19. Fakhar, A., Gul, B., Gurmani, A. R., Khan, S. M., Ali, S., Sultan, T., Chaudhary, H. J., Rafique, M., & Rizwan, M. (2022). Heavy metal remediation and resistance mechanism of Aeromonas, Bacillus, and Pseudomonas: A review. Critical Reviews in Environmental Science and Technology, 52(11), 1868–1914. https://doi.org/10.1080/10643389.2020.1863112 · DOI
  20. Fredrickson, J. K., Romine, M. F., Beliaev, A. S., Auchtung, J. M., Driscoll, M. E., Gardner, T. S., Nealson, K. H., Osterman, A. L., Pinchuk, G., Reed, J. L., Rodionov, D. A., Rodrigues, J. L. M., Saffarini, D. A., Serres, M. H., Spormann, A. M., Zhulin, I. B., & Tiedje, J. M. (2008). Towards environmental systems biology of Shewanella. Nature Reviews Microbiology, 6(8), 592–603. https://doi.org/10.1038/nrmicro1947 · DOI
  21. Han, S., Tao, Y., Zhao, L., Cui, Y., & Zhang, Y. (2024). Metabolic insights into how multifunctional microbial consortium enhances atrazine removal and phosphorus uptake at low temperature. Journal of Hazardous Materials, 461, 132539. https://doi.org/10.1016/j.jhazmat.2023.132539 · DOI
  22. Harun, F. A., Yusuf, M. R., Usman, S., Shehu, D., Babagana, K., Sufyanu, A. J., Jibril, M. M., Bello, A. M., Musa, K. A., Jagaba, A. H., & Shukor, M. Y. (2023). Bioremediation of lead contaminated environment by Bacillus cereus strain BUK_BCH_BTE2: Isolation and characterization of the bacterium. Case Studies in Chemical and Environmental Engineering, 8, 100540. https://doi.org/10.1016/j.cscee.2023.100540 · DOI
  23. Huang, J., Liu, C., Price, G. W., Li, Y., & Wang, Y. (2021). Identification of a novel heavy metal resistant Ralstonia strain and its growth response to cadmium exposure. Journal of Hazardous Materials, 416, 125942. https://doi.org/10.1016/j.jhazmat.2021.125942 · DOI
  24. Huang, X.-N., Min, D., Liu, D.-F., Cheng, L., Qian, C., Li, W.-W., & Yu, H.-Q. (2019). Formation mechanism of organo-chromium (III) complexes from bioreduction of chromium (VI) by aeromonas hydrophila. Environment International, 129, 86–94. · DOI
  25. Hussein, S., Sulaiman, S., Ali, S., Pirot, R., Qurbani, K., Hamzah, H., Hassan, O., Ismail, T., Ahmed, S. K., & Azizi, Z. (2024). Synthesis of silver nanoparticles from Aeromonas caviae for antibacterial activity and in vivo effects in rats. Biological Trace Element Research, 202(6), 2764–2775. https://doi.org/10.1007/s12011-023-03876-w · DOI
  26. Ibrahim, A., El-Fakharany, E. M., Abu-Serie, M. M., ElKady, M. F., & Eltarahony, M. (2022). Methyl orange biodegradation by immobilized consortium microspheres: experimental design approach. Toxicity Study and Bioaugmentation Potential Biology, 11(1), 76. https://doi.org/10.3390/biology11010076 · DOI
  27. Ibrahim, W. M., Amiri, O., Ahmed, S. S., Muhammed, H. Y., Mahmood, P. H., Qurbani, K. A., Abdulrahman, N. A., Younis, K. A., & Omer, P. K. (2024). Enhanced asphaltene degradation using piezocatalytic technology: A novel approach for sustainable oilfield operations. Results in Engineering, 21, 101938. https://doi.org/10.1016/j.rineng.2024.101938 · DOI
  28. Janda, J. M., & Abbott, S. L. (2010). The genus aeromonas: Taxonomy, pathogenicity, and infection. Clinical Microbiology Reviews, 23(1), 35–73. https://doi.org/10.1128/CMR.00039-09 · DOI · Paper page
  29. Kumar, S., Stecher, G., Li, M., Knyaz, C., & Tamura, K. (2018). MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35(6), 1547–1549. https://doi.org/10.1093/molbev/msy096 · DOI
  30. Lemaire, O. N., Méjean, V., & Iobbi-Nivol, C. (2020). The Shewanella genus: Ubiquitous organisms sustaining and preserving aquatic ecosystems. FEMS Microbiology Reviews, 44(2), 155–170. https://doi.org/10.1093/femsre/fuz031 · DOI
  31. Li, X., Feng, C., Lei, M., Luo, K., Wang, L., Liu, R., Li, Y., & Yining, H. (2022). Bioremediation of organic/heavy metal contaminants by mixed cultures of microorganisms: A review. Open Chemistry, 20(1), 793–807. https://doi.org/10.1515/chem-2022-0198 · DOI
  32. Li, X., Wu, S., Dong, Y., Fan, H., Bai, Z., & Zhuang, X. (2021). Engineering microbial consortia towards bioremediation. Water, 13(20), 2928. https://doi.org/10.3390/w13202928 · DOI · Paper page
  33. Lin, H., Zhou, M., Li, B., & Dong, Y. (2023). Mechanisms, application advances and future perspectives of microbial-induced heavy metal precipitation: A review. International Biodeterioration & Biodegradation, 178, 105544. https://doi.org/10.1016/j.ibiod.2022.105544 · DOI
  34. Martín-Rodríguez, A. J., Reyes-Darias, J. A., Martín-Mora, D., González, J. M., Krell, T., & Römling, U. (2021). Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae. Npj Biofilms and Microbiomes. https://doi.org/10.1038/s41522-020-00177-1 · DOI
  35. Medfu Tarekegn, M., Zewdu Salilih, F., & Ishetu, A. I. (2020). Microbes used as a tool for bioremediation of heavy metal from the environment. Cogent Food & Agriculture, 6(1), 1783174. https://doi.org/10.1080/23311932.2020.1783174 · DOI
  36. Min, D., Wu, J., Cheng, L., Liu, D.-F., Lau, T.-C., & Yu, H.-Q. (2021). Dependence of arsenic resistance and reduction capacity of Aeromonas hydrophila on carbon substrate. Journal of Hazardous Materials, 403, 123611. · DOI
  37. Mishra, S., Huang, Y., Li, J., Wu, X., Zhou, Z., Lei, Q., Bhatt, P., & Chen, S. (2022). Biofilm-mediated bioremediation is a powerful tool for the removal of environmental pollutants. Chemosphere, 294, 133609. https://doi.org/10.1016/j.chemosphere.2022.133609 · DOI
  38. Moon, S., Ham, S., Jeong, J., Ku, H., Kim, H., & Lee, C. (2023). Temperature matters: Bacterial response to temperature change. Journal of Microbiology, 61(3), 343–357. https://doi.org/10.1007/s12275-023-00031-x · DOI
  39. Obafemi, Y. D., Taiwo, O. S., Omodara, O. J., Dahunsi, O. S., & Oranusi, S. (2018). Biodegradation of crude petroleum by bacterial consortia from oil-contaminated soils in Ota, Ogun State, South-Western, Nigeria. Environmental Technology & Innovation, 12, 230–242. · DOI
  40. Ojuederie, O., & Babalola, O. (2017). Microbial and plant-assisted bioremediation of heavy metal polluted environments: A review. International Journal of Environmental Research and Public Health, 14(12), 1504. https://doi.org/10.3390/ijerph14121504 · DOI
  41. Pagnucco, G., Overfield, D., Chamlee, Y., Shuler, C., Kassem, A., Opara, S., Najaf, H., Abbas, L., Coutinho, O., Fortuna, A., Sulaiman, F., Farinas, J., Schittenhelm, R., Catalfano, B., Li, X., & Tiquia-Arashiro, S. M. (2023). Metal tolerance and biosorption capacities of bacterial strains isolated from an urban watershed. Frontiers in Microbiology. https://doi.org/10.3389/fmicb.2023.1278886 · DOI
  42. Pascual-García, A., Bonhoeffer, S., & Bell, T. (2020). Metabolically cohesive microbial consortia and ecosystem functioning. Philosophical Transactions of the Royal Society b: Biological Sciences, 375(1798), 20190245. https://doi.org/10.1098/rstb.2019.0245 · DOI
  43. Qurbani, K., & Hamzah, H. (2021). Heavy metal tolerant comamonas species isolated from soil sample in Tanjaro region of Sulaymaniyah city-Iraq. Annals of the Romanian Society for Cell Biology, 5068–5074.
  44. Qurbani, K., & Hamzah, H. (2020). Intimate communication between comamonas aquatica and fusarium solani in remediation of heavy metal-polluted environments. Archives of Microbiology, 202(6), 1397–1406. https://doi.org/10.1007/s00203-020-01853-8 · DOI
  45. Qurbani, K., Khdir, K., Sidiq, A., Hamzah, H., Hussein, S., Hamad, Z., Abdulla, R., Abdulla, B., & Azizi, Z. (2022). Aeromonas sobria as a potential candidate for bioremediation of heavy metal from contaminated environments. Scientific Reports. https://doi.org/10.1038/s41598-022-25781-3 · DOI
  46. Rizvi, A., & Saghir Khan, M. (2019). Putative Role of Bacterial Biosorbent in Metal Sequestration Revealed by SEM–EDX and FTIR. Indian Journal of Microbiology, 59, 246–249. https://doi.org/10.1007/s12088-019-00780-7 · DOI
  47. Roy, R., Samanta, S., Pandit, S., Naaz, T., Banerjee, S., Rawat, J. M., Chaubey, K. K., & Saha, R. P. (2024). An overview of bacteria-mediated heavy metal bioremediation strategies. Applied Biochemistry and Biotechnology, 196(3), 1712–1751. https://doi.org/10.1007/s12010-023-04614-7 · DOI
  48. Sable, H., Kumar, V., Mishra, R., Kumar, S., Pandit, S., Singh, V., Roy, A., Ranjan, N., Sharma, K., & Verma, R. (2024). Biosorption of hexavalent chromium by Shewanella putrefaciens MTCC 8104: Response surface methodology optimization and mechanistic insights. Indian Journal of Microbiology. https://doi.org/10.1007/s12088-024-01365-9 · DOI
  49. Sharma, N., Yadav, G., Varma, A., Koul, M., & Mishra, A. (2024). Heavy metal remediation from rhizospheric soil by using microbial consortium. In J. Gupta & A. Verma (Eds.), Microbiology-2.0 update for a sustainable future (pp. 57–76). Singapore: Springer Nature Singapore. https://doi.org/10.1007/978-981-99-9617-9_4 · DOI
  50. Sharma, R., Jasrotia, T., Kumar, R., Kumar, R., Umar, A., Alharthi, F. A., Alghamdi, A. A., & Al-Zaqri, N. (2021). An insight into the mechanism of ‘symbiotic-bioremoval’ of heavy metal ions from synthetic and industrial samples using bacterial consortium. Environmental Technology & Innovation. https://doi.org/10.1016/j.eti.2020.101302 · DOI
  51. Shetty, S. S., Deepthi, D., Harshitha, S., Sonkusare, S., Naik, P. B., & Madhyastha, H. (2023). Environmental pollutants and their effects on human health. Heliyon. https://doi.org/10.1016/j.heliyon.2023.e19496 · DOI
  52. Sonawane, J. M., Rai, A. K., Sharma, M., Tripathi, M., & Prasad, R. (2022). Microbial biofilms: Recent advances and progress in environmental bioremediation. Science of the Total Environment, 824, 153843. https://doi.org/10.1016/j.scitotenv.2022.153843 · DOI
  53. Tran, T. T. T., Kannoorpatti, K., Padovan, A., & Thennadil, S. (2021). Sulphate-reducing bacteria’s response to extreme pH environments and the effect of their activities on microbial corrosion. Applied Sciences, 11(5), 2201. https://doi.org/10.3390/app11052201 · DOI
  54. Ugrina, M., & Jurić, A. (2023). Current trends and future perspectives in the remediation of polluted water, soil and air—A review. Processes, 11(12), 3270. https://doi.org/10.3390/pr11123270 · DOI
  55. Wang, Q., Guo, S., Ali, M., Song, X., Tang, Z., Zhang, Z., Zhang, M., & Luo, Y. (2022). Thermally enhanced bioremediation: A review of the fundamentals and applications in soil and groundwater remediation. Journal of Hazardous Materials, 433, 128749. https://doi.org/10.1016/j.jhazmat.2022.128749 · DOI
  56. Yasmin, R., Zafar, M. S., Tahir, I. M., Asif, R., Asghar, S., & Raza, S. K. (2022). Biosorptive potential of Pseudomonas species RY12 toward zinc heavy metal in agriculture soil irrigated with contaminated waste water. Dose-Response, 20(3), 15593258221117352. https://doi.org/10.1177/15593258221117352 · DOI
  57. Yu, K., Huang, Z., Xiao, Y., & Wang, D. (2022). Shewanella infection in humans: Epidemiology, clinical features and pathogenicity. Virulence, 13(1), 1515–1532. https://doi.org/10.1080/21505594.2022.2117831 · DOI
  58. Zhang, K., Zhang, D., Wu, X., & Xue, Y. (2021). Continuous and efficient immobilization of heavy metals by phosphate-mineralized bacterial consortium. Journal of Hazardous Materials, 416, 125800. https://doi.org/10.1016/j.jhazmat.2021.125800 · DOI
  59. Zhao, D., Cheah, W. Y., Lai, S. H., Ng, E.-P., Khoo, K. S., Show, P. L., & Ling, T. C. (2023). Symbiosis of microalgae and bacteria consortium for heavy metal remediation in wastewater. Journal of Environmental Chemical Engineering, 11(3), 109943. https://doi.org/10.1016/j.jece.2023.109943 · DOI

Metadata

Authors
Khidr, R., Qurbani, K., Muhammed, V., Salim, S., Abdulla, S., & Wsw, H.
Affiliations
University of Raparin (IQ)
Corresponding author
Qurbani, Karzan
Venue
Environmental Geochemistry and Health
Published
2025-02-18
Volume
47
Issue
3
Pages
79-79
ISSN
  • 0269-4042 (ISSN-L)
  • 1573-2983
OpenAlex
W4407688379
Cited by
29
References
0
Citations by year
2026: 18 · 2025: 11
FWCI
7.33
Type
journal article
Language
en
Open access
closed
Locations
  • Environmental Geochemistry and Health (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Physical Sciences › Environmental Science › Water Science and Technology › Heavy Metal Pollution Remediation
  • Physical Sciences › Environmental Science › Water Science and Technology › Adsorption and biosorption for pollutant removal
  • Physical Sciences › Environmental Science › Health, Toxicology and Mutagenesis › Chromium effects and bioremediation
Keywords
heavy metal bioremediation, bacterial consortium, Aeromonas caviae, Aeromonas hydrophila, Shewanella putrefaciens, heavy metal tolerance, metal reduction, copper removal, zinc removal, nickel removal, biosorption, bioaccumulation, biotransformation, temperature effects, pH effect, salinity effects, indigenous bacteria
MeSH terms
Aeromonas, Biodegradation, Environmental, Hydrogen-Ion Concentration, Coculture Techniques, Metals, Heavy, Shewanella putrefaciens, Microbial Consortia

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review