Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 1,527

The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.

Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse

Open access
Bernstein, Bradley E., Kamal, Michael, Lindblad-Toh, Kerstin, Bekiranov, Stefan, Bailey, Dione K., Huebert, Dana J., McMahon, Scott, Karlsson, Elinor K., Kulbokas, Edward J., Gingeras, Thomas R., Schreiber, Stuart L., Lander, Eric S.·2005·Cell

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.cell.2005.01.001

Cites

5 of 5 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 5 references

Research works printed but not linked: 40

  1. Bae, 2002, Characterization of the intergenic RNA profile at abdominal-A and Abdominal-B in the Drosophila bithorax complex, Proc. Natl. Acad. Sci. USA, 99, 16847, 10.1073/pnas.222671299 · DOI
  2. Benson, 2004, GenBank, Nucleic Acids Res., 32, D23, 10.1093/nar/gkh045 · DOI
  3. Bernstein, 2002, Methylation of histone H3 Lys 4 in coding regions of active genes, Proc. Natl. Acad. Sci. USA, 99, 8695, 10.1073/pnas.082249499 · DOI
  4. Bernstein, 2004, Global nucleosome occupancy in yeast, Genome Biol., 5, R62, 10.1186/gb-2004-5-9-r62 · DOI · Paper page
  5. Blanchette, 2004, Aligning multiple genomic sequences with the threaded blockset aligner, Genome Res., 14, 708, 10.1101/gr.1933104 · DOI · Paper page
  6. Bolland, 2004, Antisense intergenic transcription in V(D)J recombination, Nat. Immunol., 5, 630, 10.1038/ni1068 · DOI
  7. Bolstad, 2003, A comparison of normalization methods for high density oligonucleotide array data based on variance and bias, Bioinformatics, 19, 185, 10.1093/bioinformatics/19.2.185 · DOI
  8. Bulger, 2003, A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus, Mol. Cell. Biol., 23, 5234, 10.1128/MCB.23.15.5234-5244.2003 · DOI
  9. Chambeyron, 2004, Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription, Genes Dev., 18, 1119, 10.1101/gad.292104 · DOI · Paper page
  10. Chang, 2002, Diversity, topographic differentiation, and positional memory in human fibroblasts, Proc. Natl. Acad. Sci. USA, 99, 12877, 10.1073/pnas.162488599 · DOI · Paper page
  11. Feinberg, 2004, The history of cancer epigenetics, Nat. Rev. Cancer, 4, 143, 10.1038/nrc1279 · DOI · Paper page
  12. Fischle, 2003, Histone and chromatin cross-talk, Curr. Opin. Cell Biol., 15, 172, 10.1016/S0955-0674(03)00013-9 · DOI · Paper page
  13. Francis, 2001, Mechanisms of transcriptional memory, Nat. Rev. Mol. Cell Biol., 2, 409, 10.1038/35073039 · DOI · Paper page
  14. Gilbert, 2004, Chromatin architecture of the human genome, Cell, 118, 555, 10.1016/j.cell.2004.08.011 · DOI · Paper page
  15. Gribnau, 2000, Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus, Mol. Cell, 5, 377, 10.1016/S1097-2765(00)80432-3 · DOI · Paper page
  16. Hampsey, 2003, Tails of intrigue, Cell, 113, 429, 10.1016/S0092-8674(03)00360-X · DOI
  17. Hubbard, 2002, The Ensembl genome database project, Nucleic Acids Res., 30, 38, 10.1093/nar/30.1.38 · DOI · Paper page
  18. Jenuwein, 2001, Translating the histone code, Science, 293, 1074, 10.1126/science.1063127 · DOI · Paper page
  19. Kampa, 2004, Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22, Genome Res., 14, 331, 10.1101/gr.2094104 · DOI
  20. Kapranov, 2002, Large-scale transcriptional activity in chromosomes 21 and 22, Science, 296, 916, 10.1126/science.1068597 · DOI · Paper page
  21. Kmita, 2003, Organizing axes in time and space; 25 years of colinear tinkering, Science, 301, 331, 10.1126/science.1085753 · DOI
  22. Krogan, 2003, The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p, Mol. Cell, 11, 721, 10.1016/S1097-2765(03)00091-1 · DOI · Paper page
  23. Liang, 2004, Distinct localization of histone H3 acetylation and H3–K4 methylation to the transcription start sites in the human genome, Proc. Natl. Acad. Sci. USA, 101, 7357, 10.1073/pnas.0401866101 · DOI · Paper page
  24. Litt, 2001, Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus, Science, 293, 2453, 10.1126/science.1064413 · DOI
  25. Liu, 2003, Development and validation of a T7 based linear amplification for genomic DNA, BMC Genomics, 4, 19, 10.1186/1471-2164-4-19 · DOI
  26. McKittrick, 2004, Histone H3.3 is enriched in covalent modifications associated with active chromatin, Proc. Natl. Acad. Sci. USA, 101, 1525, 10.1073/pnas.0308092100 · DOI · Paper page
  27. Milne, 2002, MLL targets SET domain methyltransferase activity to Hox gene promoters, Mol. Cell, 10, 1107, 10.1016/S1097-2765(02)00741-4 · DOI
  28. Nakamura, 2002, ALL-1 is a histone methyltransferase that assembles a supercomplex of proteins involved in transcriptional regulation, Mol. Cell, 10, 1119, 10.1016/S1097-2765(02)00740-2 · DOI · Paper page
  29. Ng, 2003, Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity, Mol. Cell, 11, 709, 10.1016/S1097-2765(03)00092-3 · DOI
  30. Rank, 2002, Transcription through intergenic chromosomal memory elements of the Drosophila bithorax complex correlates with an epigenetic switch, Mol. Cell. Biol., 22, 8026, 10.1128/MCB.22.22.8026-8034.2002 · DOI
  31. Roh, 2004, High-resolution genome-wide mapping of histone modifications, Nat. Biotechnol., 22, 1013, 10.1038/nbt990 · DOI
  32. Santos-Rosa, 2003, Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin, Mol. Cell, 12, 1325, 10.1016/S1097-2765(03)00438-6 · DOI
  33. Schneider, 2004, Histone H3 lysine 4 methylation patterns in higher eukaryotic genes, Nat. Cell Biol., 6, 73, 10.1038/ncb1076 · DOI
  34. Schreiber, 2002, Signaling network model of chromatin, Cell, 111, 771, 10.1016/S0092-8674(02)01196-0 · DOI · Paper page
  35. Schubeler, 2004, The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote, Genes Dev., 18, 1263, 10.1101/gad.1198204 · DOI
  36. Sims, 2004, Elongation by RNA polymerase II, Genes Dev., 18, 2437, 10.1101/gad.1235904 · DOI · Paper page
  37. Smith, 2004, Modulation of heat shock gene expression by the TAC1 chromatin-modifying complex, Nat. Cell Biol., 6, 162, 10.1038/ncb1088 · DOI
  38. Turner, 2002, Cellular memory and the histone code, Cell, 111, 285, 10.1016/S0092-8674(02)01080-2 · DOI · Paper page
  39. Wolffe, 1999, Epigenetics, Science, 286, 481, 10.1126/science.286.5439.481 · DOI · Paper page
  40. Yu, 1995, Altered Hox expression and segmental identity in Mll-mutant mice, Nature, 378, 505, 10.1038/378505a0 · DOI

Cited by

See all 1,527

Metadata

Authors
Bernstein, B. E., Kamal, M., Lindblad-Toh, K., Bekiranov, S., Bailey, D. K., Huebert, D. J., McMahon, S., Karlsson, E. K., Kulbokas, E. J., Gingeras, T. R., Schreiber, S. L., & Lander, E. S.
Venue
Cell
Publisher
Elsevier BV
Published
2005-01
Volume
120
Issue
2
Pages
169-181
ISSN
0092-8674 (ISSN-L)
OpenAlex
W2007684630
Cited by
1,527
References
5
FWCI
44.37
Type
journal article
Language
en
Open access
bronze
Licence

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse. https://app.cochat.ai/papers/10.1016/j.cell.2005.01.001
The paper
Bernstein, B. E., Kamal, M., Lindblad-Toh, K., Bekiranov, S., Bailey, D. K., Huebert, D. J., McMahon, S., Karlsson, E. K., Kulbokas, E. J., Gingeras, T. R., Schreiber, S. L., & Lander, E. S. (2005). Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse. Cell. https://doi.org/10.1016/j.cell.2005.01.001

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.