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Mapping the Hallmarks of Lung Adenocarcinoma with Massively Parallel Sequencing
Open accessAbstract
Lung adenocarcinoma, the most common subtype of non-small cell lung cancer, is responsible for more than 500,000 deaths per year worldwide. Here, we report exome and genome sequences of 183 lung adenocarcinoma tumor/normal DNA pairs. These analyses revealed a mean exonic somatic mutation rate of 12.0 events/megabase and identified the majority of genes previously reported as significantly mutated in lung adenocarcinoma. In addition, we identified statistically recurrent somatic mutations in the splicing factor gene U2AF1 and truncating mutations affecting RBM10 and ARID1A. Analysis of nucleotide context-specific mutation signatures grouped the sample set into distinct clusters that correlated with smoking history and alterations of reported lung adenocarcinoma genes. Whole-genome sequence analysis revealed frequent structural rearrangements, including in-frame exonic alterations within EGFR and SIK2 kinases. The candidate genes identified in this study are attractive targets for biological characterization and therapeutic targeting of lung adenocarcinoma.
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“KRAS mutations predominate in NSCLCs, accounting for ~78% of all RAS mutations found in such tumours17. The activating missense KRAS mutations that occur in ~25% of NSCLCs19–23 are typically mutually exclusive with other clinically actionable driver mutations, such as those in EGFR, BRAF and ALK24.”
From The current state of the art and future trends in RAS-targeted cancer therapies (2022) · cites this paper as [23]
In the citing paper
“Importantly, large-scale profiling studies utilizing either whole exome sequencing or broad targeted sequencing panels in NSCLC tumors have revealed multiple non-random patterns of co-occurring or mutually exclusive mutations, which typically vary depending on the particular oncogenic driver mutation15, 34, 58–62.”
From Co-occurring genomic alterations in non-small-cell lung cancer biology and therapy (2019) · cites this paper as [62]
In the citing paper
“Landmark large scale sequencing studies have established a census of major KRAS co-mutations in both early-stage and advanced LUAD15, 34, 59, 62.”
From Co-occurring genomic alterations in non-small-cell lung cancer biology and therapy (2019) · cites this paper as [62]
In the citing paper
“Activating mutations in KRAS are the most prevalent oncogenic driver event in both early-stage and metastatic LUAD, occurring in 25–32% of tumors34, 59, 60, 62, 67.”
From Co-occurring genomic alterations in non-small-cell lung cancer biology and therapy (2019) · cites this paper as [62]
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Cites
Hallmarks of Cancer: The Next Generation
Hanahan, D., & Weinberg, R. A. (2011) · Cell · doi:10.1016/j.cell.2011.02.013 · Cited by 66,590
Hanahan, D., & Weinberg, R. A. (2000) · Cell · doi:10.1016/s0092-8674(00)81683-9 · Cited by 29,219
A method and server for predicting damaging missense mutations.
Adzhubei, I. A., Schmidt, S., Peshkin, L., Ramensky, V. E., Gerasimova, A., Bork, P., Kondrashov, A. S., & Sunyaev, S. R. (2010) · Nature Methods · doi:10.1038/nmeth0410-248 · Cited by 13,194
Lynch, T. J., Bell, D. W., Sordella, R., Gurubhagavatula, S., Okimoto, R. A., Brannigan, B. W., Harris, P. L., Haserlat, S. M., Supko, J. G., Haluska, F. G., et al. (2004) · New England Journal of Medicine · doi:10.1056/nejmoa040938 · Cited by 11,486
Circos: An information aesthetic for comparative genomicsPreprint
Krzywinski, M. I., Schein, J. E., Birol, İ., Connors, J. M., Gascoyne, R. D., Horsman, D. E., Jones, S. J. M., & Marra, M. A. (2009) · Genome Research · doi:10.1101/gr.092759.109 · Cited by 11,073
EGFR Mutations in Lung Cancer: Correlation with Clinical Response to Gefitinib Therapy
Paez, J. G., Jänne, P. A., Lee, J. C., Tracy, S., Greulich, H., Gabriel, S., Herman, P., Kaye, F. J., Lindeman, N., Boggon, T. J., et al. (2004) · Science · doi:10.1126/science.1099314 · Cited by 9,368
Self-citationThe Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
Barretina, J., Caponigro, G., Stransky, N., Venkatesan, K., Margolin, A. A., Kim, S., Wilson, C. J., Lehár, J., Kryukov, G. V., Sonkin, D., et al. (2012) · Nature · doi:10.1038/nature11003 · Cited by 7,950
Self-citationIntegrated genomic analyses of ovarian carcinoma
Perou, C. M. (2019) · Carolina Digital Repository (University of North Carolina at Chapel Hill) · doi:10.17615/hvp3-wg08 · Cited by 7,927
Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing
Gerlinger, M., Rowan, A. J., Horswell, S., Larkin, J., Endesfelder, D., Gronroos, E., Martinez, P., Matthews, N., Stewart, A., Tarpey, P., et al. (2012) · New England Journal of Medicine · doi:10.1056/nejmoa1113205 · Cited by 7,774
Anaplastic Lymphoma Kinase Inhibition in Non–Small-Cell Lung Cancer
Kwak, E. L., Bang, Y., Camidge, D. R., Shaw, A. T., Solomon, B., Maki, R. G., Ou, S. I., Dezube, B. J., Janne, P. A., Costa, D. B., et al. (2010) · New England Journal of Medicine · doi:10.1056/nejmoa1006448 · Cited by 4,477
Flagged first, then by citations
Cited by
Sorted by citations
Items 901–1,000 of 1,000
Glycogen drives tumour initiation and progression in lung adenocarcinoma
Clarke, H. A., Hawkinson, T. R., Shedlock, C. J., Medina, T., Ribas, R. A., Wu, L., Liu, Z., Ma, X., Xia, Y., Huang, Y., et al. (2025) · Nature Metabolism · doi:10.1038/s42255-025-01243-8 · Cited by 25
Epistatic interactions and drug response
Weigelt, B., & Reis-Filho, J. S. (2013) · The Journal of Pathology · doi:10.1002/path.4265 · Cited by 26
Righi, L., Vatrano, S., Nicolantonio, F. D., Massa, F., Rossi, G., Cavazza, A., Volante, M., Votta, A., Izzo, S., Iacono, M. L., et al. (2016) · Journal of Thoracic Oncology · doi:10.1016/j.jtho.2016.01.004 · Cited by 24
Xing, A., Li, P., & Gao, J. (2017) · Thoracic Cancer · doi:10.1111/1759-7714.12564 · Cited by 24
Deshpande, A. S., Lang, W., McDowell, T. L., Sivakumar, S., Zhang, J., Wang, J., Lucas, F. A. S., Fowler, J., Kadara, H. N., & Scheet, P. A. (2018) · BMC Bioinformatics · doi:10.1186/s12859-017-1991-3 · Cited by 23
E-Cadherin Loss Accelerates Tumor Progression and Metastasis in a Mouse Model of Lung Adenocarcinoma
Sinkevicius, K. W., Bellaria, K. J., Barrios, J., Pessina, P., Gupta, M., Brainson, C. F., Bronson, R. T., & Kim, C. F. (2018) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2017-0210oc · Cited by 24
Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway
Carrot‐Zhang, J., Yao, X., Devarakonda, S. H. K., Deshpande, A. S., Damrauer, J. S., Silva, T. C., Wong, C. K., Choi, H. Y., Felau, I., Robertson, A. G., et al. (2021) · Cell Reports · doi:10.1016/j.celrep.2021.108784 · Cited by 24
Self-citationTesting EGFR with Idylla on Cytological Specimens of Lung Cancer: A Review
Caputo, A., D’Ardia, A., Sabbatino, F., Picariello, C., Ciaparrone, C., Zeppa, P., & D’Antonio, A. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22094852 · Cited by 25
Zhang, S., Xu, Y., Zhao, P., Bao, H., Wang, X., Liu, R., Xu, R., Xiang, J., Jiang, H. F., Yan, J., et al. (2021) · Frontiers in Oncology · doi:10.3389/fonc.2021.652193 · Cited by 24
Research Needs for Understanding the Biology of Overdiagnosis in Cancer Screening
Srivastava, S., Reid, B. J., Ghosh, S., & Kramer, B. S. (2015) · Journal of Cellular Physiology · doi:10.1002/jcp.25227 · Cited by 24
McMahon, M. J., Campbell, K. H., MacLeod, A. K., McLaughlin, L. A., Henderson, C. J., & Wolf, C. R. (2014) · PLoS ONE · doi:10.1371/journal.pone.0114055 · Cited by 24
Spliceosome mutations in myelodysplastic syndromes and chronic myelomonocytic leukemia
Chesnais, V., Kosmider, O., Damm, F., Itzykson, R., Bernard, O., Solary, É., & Fontenay, M. (2012) · Oncotarget · doi:10.18632/oncotarget.749 · Cited by 25
Bian, C., Li, Z., Xu, Y., Wang, J., Xu, L., & Shen, H. (2015) · World Journal of Surgical Oncology · doi:10.1186/s12957-015-0502-0 · Cited by 25
Ablation of insulin receptor substrates 1 and 2 suppresses Kras -driven lung tumorigenesis
Xu, H., Lee, M.-S., Tsai, P.-Y., Adler, A., Curry, N. L., Challa, S. P., Freinkman, E., Hitchcock, D. S., Copps, K. D., White, M. F., et al. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1718414115 · Cited by 24
CNOT3 targets negative cell cycle regulators in non-small cell lung cancer development
Shirai, Y.-T., Mizutani, A., Nishijima, S., Horie, M., Kikuguchi, C., Elisseeva, O. A., & Yamamoto, T. S. (2018) · Oncogene · doi:10.1038/s41388-018-0603-7 · Cited by 23
Survival analysis and functional annotation of long non‐coding RNAs in lung adenocarcinoma
Salavaty, A., Rezvani, Z., & Najafi, A. (2019) · Journal of Cellular and Molecular Medicine · doi:10.1111/jcmm.14458 · Cited by 24
Role of liquid biopsy in oncogene-addicted non-small cell lung cancer
Canale, M., Pasini, L., Bronte, G., Delmonte, A., Cravero, P., Crinò, L., & Ulivi, P. (2019) · Translational Lung Cancer Research · doi:10.21037/tlcr.2019.09.15 · Cited by 24
Michail, C., Rodrigues‐Lima, F., Viguier, M., & Deshayes, F. (2024) · Neoplasia · doi:10.1016/j.neo.2024.101090 · Cited by 27
Targeted therapies of solid cancers
Awada, A. H., & Aftimos, P. G. (2013) · Current Opinion in Oncology · doi:10.1097/cco.0b013e32835ff318 · Cited by 23
Liu, C., Li, Z., Wang, S., Fan, Y., Zhang, S., Yang, X., Hou, K., Tong, J., Hu, X., Shi, X., et al. (2018) · Journal of Cancer Research and Clinical Oncology · doi:10.1007/s00432-018-2761-y · Cited by 23
Brahma‐Related Gene‐1 (BRG1) promotes the malignant phenotype of glioblastoma cells
Wang, Y., Yang, C. H., Schultz, A. P., Sims, M. M., Miller, D. D., & Pfeffer, L. M. (2021) · Journal of Cellular and Molecular Medicine · doi:10.1111/jcmm.16330 · Cited by 23
Understanding the significance of biological clock and its impact on cancer incidence
Malik, S., Stokes, J. A., III, Manne, U., Singh, R., & Mishra, M. K. (2021) · Cancer Letters · doi:10.1016/j.canlet.2021.12.006 · Cited by 25
Zhou, P., Fu, Y., Tang, Y., Jiang, L., & Wang, W. (2024) · Lung Cancer · doi:10.1016/j.lungcan.2024.107471 · Cited by 23
Shathasivam, P., Kollara, A., Ringuette, M. J., Virtanen, C., Wrana, J. L., & Brown, T. J. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1504671112 · Cited by 23
Novel EPHB4 Receptor Tyrosine Kinase Mutations and Kinomic Pathway Analysis in Lung Cancer
Ferguson, B. D., Tan, Y. C., Kanteti, R., Liu, R., Gayed, M. J., Vokes, E. E., Ferguson, M. K., Iafrate, A. J., Gill, P. S., & Salgia, R. (2015) · Scientific Reports · doi:10.1038/srep10641 · Cited by 23
Wen, X., Han, X., Wang, Y., Fan, S., Zhuang, J., Zhang, Z.-F., Shan, Q., Li, M., Hu, B., Sun, C., et al. (2017) · Journal of Cellular Biochemistry · doi:10.1002/jcb.26344 · Cited by 23
RetractedYu, J., Hu, Y., Xu, Y., Wang, J., Kuang, J., Zhang, Y., Shao, J., Guo, D., & Wang, Y. (2019) · BMC Cancer · doi:10.1186/s12885-019-5433-7 · Cited by 23
Liu, H., Hu, L., Yu, G., Yang, H., Cao, Y., Wang, S., & Fan, Z. (2021) · Stem Cells · doi:10.1002/stem.3362 · Cited by 23
Primary cilia and cancer: a tale of many faces
Collinson, R. S., & Tanos, B. E. (2025) · Oncogene · doi:10.1038/s41388-025-03416-x · Cited by 28
Clinical relevance of the new IASLC/ERS/ATS adenocarcinoma classification
Kerr, K. M. (2013) · Journal of Clinical Pathology · doi:10.1136/jclinpath-2013-201519 · Cited by 22
RNA splicing, cell signaling, and response to therapies
Fayçal, C. A., Gazzéri, S., & Eymin, B. (2015) · Current Opinion in Oncology · doi:10.1097/cco.0000000000000254 · Cited by 22
Integrating genetic mutations and expression profiles for survival prediction of lung adenocarcinoma
Song, Y., Chen, D., Zhang, X., Luo, Y., & Li, S. (2019) · Thoracic Cancer · doi:10.1111/1759-7714.13072 · Cited by 22
Engineering Multidimensional Evolutionary Forces to Combat Cancer
McCoach, C. E., & Bivona, T. G. (2019) · Cancer Discovery · doi:10.1158/2159-8290.cd-18-1196 · Cited by 23
Li, W., Li, X., Li, X., Li, M., Yang, P., Wang, X., Li, L., & Yang, B. (2020) · OncoTargets and Therapy · doi:10.2147/ott.s229997 · Cited by 22
RetractedYang, C., Wang, Y., Sims, M. M., He, Y., Miller, D. D., & Pfeffer, L. M. (2021) · Pharmaceuticals · doi:10.3390/ph14090904 · Cited by 22
Synonymous Variants: Necessary Nuance in Our Understanding of Cancer Drivers and Treatment Outcomes
Kaissarian, N. M., Meyer, D., & Kimchi‐Sarfaty, C. (2022) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/djac090 · Cited by 21
Xiang, C., Ji, C., Cai, Y., Teng, H., Wang, Y., Zhao, R., Shang, Z., Guo, L., Chen, S., Lizaso, A., et al. (2022) · Modern Pathology · doi:10.1038/s41379-022-01076-w · Cited by 22
Deletion ofPtprdandCdkn2acooperate to accelerate tumorigenesis
Ortiz, B., White, J. R., Wu, W., & Chan, T. A.-T. (2014) · Oncotarget · doi:10.18632/oncotarget.2106 · Cited by 22
Limited evidence that cancer susceptibility regions are preferential targets for somatic mutation
Machiela, M. J., Ho, B. M., Fisher, V. A., Hua, X., & Chanock, S. J. (2015) · Genome biology · doi:10.1186/s13059-015-0755-5 · Cited by 22
S1‐1/RBM10: Multiplicity and cooperativity of nuclear localisation domains
Xiao, S., Wang, L., Kimura, M., Kojima, H., Kunimoto, H., Nishiumi, F., Yamamoto, N., Nishio, K., Fujimoto, S., Kato, T., et al. (2013) · Biology of the Cell · doi:10.1111/boc.201200068 · Cited by 22
Lung Cancer Mutations and Use of Targeted Agents in Hispanics
Cress, W. D., Chiappori, A., Santiago, P., & Muñoz-Antonia, T. (2015) · Reviews on Recent Clinical Trials · doi:10.2174/1574887110666150127103555 · Cited by 22
Maki, Y., Fujimoto, J., Lang, W., Li, X., Behrens, C., Wistuba, I. I., & Kadara, H. N. (2015) · Scientific Reports · doi:10.1038/srep13846 · Cited by 22
Desai, A., Menon, S. P., & Dy, G. K. (2016) · PubMed Central · doi:10.28092/j.issn.2095-3941.2016.0008 · Cited by 22
Splicing arrays reveal novel RBM10 targets, including SMN2 pre-mRNA
Sutherland, L. C., Thibault, P., Durand, M., Lapointe, E., Knee, J. M., Beauvais, A., Kalatskaya, I., Hunt, S. C., Loiselle, J. J., Roy, J. G., et al. (2017) · BMC Molecular Biology · doi:10.1186/s12867-017-0096-x · Cited by 22
KLF15 suppresses cell growth and predicts prognosis in lung adenocarcinoma
Wang, X., He, M., Li, J., Wang, H., & Huang, J. (2018) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2018.07.006 · Cited by 22
Tomasini, P., Mascaux, C., Jao, K., Labbe, C., Kamel-Reid, S., Stockley, T., Hwang, D. M., Leighl, N. B., Liu, G., Bradbury, P. A., et al. (2019) · Clinical Lung Cancer · doi:10.1016/j.cllc.2018.12.009 · Cited by 22
Recurrent EGFR alterations in NTRK3 fusion negative congenital mesoblastic nephroma
Lei, L., Stohr, B. A., Berry, S. L., Lockwood, C. M., Davis, J. L., Rudzinski, E. R., & Kunder, C. A. (2020) · Practical Laboratory Medicine · doi:10.1016/j.plabm.2020.e00164 · Cited by 22
Biswas, R., Gao, S., Cultraro, C. M., Maity, T. K., Venugopalan, A. K., Abdullaev, Z., Shaytan, A. К., Carter, C. A., Thomas, A., Rajan, A., et al. (2016) · Molecular Case Studies · doi:10.1101/mcs.a001263 · Cited by 22
Integrative analysis of lung adenocarcinoma across diverse ethnicities and exposures
Satpathy, S., Clark, N. M., Chen, Y., Hosseini, N., Chang, Y.-H., Hsiao, Y., Lei, J. T., Petralia, F., Chen, J., Geffen, Y., et al. (2025) · Cancer Cell · doi:10.1016/j.ccell.2025.07.011 · Cited by 23
Self-citationLiu, M., Zhou, K., Huang, Y., & Cao, Y. (2015) · Journal of Experimental & Clinical Cancer Research · doi:10.1186/s13046-015-0235-5 · Cited by 21
Transcriptome instability as a molecular pan-cancer characteristic of carcinomas
Sveen, A., Johannessen, B., Teixeira, M. R., Lothe, R. A., & Skotheim, R. I. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-672 · Cited by 20
Zeng, L., Lyu, X., Yuan, J., Wang, W. T., Zhao, N., Liu, B., Sun, R., Meng, X., & Yang, S. (2020) · PubMed Central · Cited by 21
Lang, B., Yang, J., Garriga-Canut, M., Speroni, S., Aschern, M., Gili, M., Hoffmann, T., Tartaglia, G. G., & Maurer, S. P. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab490 · Cited by 20
Caso, R., Connolly, J. G., Zhou, J. H., Tan, K. S., Choi, J. J., Jones, G. D., Mastrogiacomo, B., Sánchez-Vega, F., Nguyen, B., Rocco, G., et al. (2021) · npj Precision Oncology · doi:10.1038/s41698-021-00210-2 · Cited by 24
Gao, S., Wang, G., Wang, L., Feng, L., Zhou, Y., Yu, X., Liang, F., Yang, F., Wang, Z., Sun, B., et al. (2022) · Cell Calcium · doi:10.1016/j.ceca.2022.102527 · Cited by 21
Whole-exome sequencing to identify novel somatic mutations in squamous cell lung cancers
Zheng, C., Gu, Z., Han, B., Zhang, R., Pan, C., Xiang, Y., Rong, X., Chen, X., LI, Q.-Y., & Wan, H. (2013) · International Journal of Oncology · doi:10.3892/ijo.2013.1991 · Cited by 21
Larráyoz, M., Pı́o, R., Pajares, M. J., Zudaire, I., Ajona, D., Casanovas, O., Montuenga, L. M., & Agorreta, J. (2014) · EMBO Molecular Medicine · doi:10.1002/emmm.201303214 · Cited by 21
McAndrew, E. N., & McManus, K. J. (2017) · Genes Chromosomes and Cancer · doi:10.1002/gcc.22458 · Cited by 22
Goto, T., Hirotsu, Y., Amemiya, K., Nakagomi, T., Shikata, D., Yokoyama, Y., Okimoto, K., Oyama, T., Mochizuki, H., & Omata, M. (2017) · Oncotarget · doi:10.18632/oncotarget.19538 · Cited by 21
Integrated analysis of dosage effect lncRNAs in lung adenocarcinoma based on comprehensive network
Wei, Y., Yan, Z., Wu, C., Zhang, Q., Zhu, Y., Li, K., & Xu, Y. (2017) · Oncotarget · doi:10.18632/oncotarget.19864 · Cited by 21
Diagnostic and Predictive Immunohistochemistry for Non–Small Cell Lung Carcinomas
Hung, Y. P., & Sholl, L. M. (2018) · Advances in Anatomic Pathology · doi:10.1097/pap.0000000000000206 · Cited by 21
DNA mismatch repair in the context of chromatin
Huang, Y., & Li, G. (2020) · Cell & Bioscience · doi:10.1186/s13578-020-0379-7 · Cited by 21
Niu, Y., Tang, D., Fan, L., Gao, W., & Lin, H. (2020) · Experimental and Therapeutic Medicine · doi:10.3892/etm.2020.8635 · Cited by 21
Targeting PGM3 as a Novel Therapeutic Strategy in KRAS/LKB1 Co-Mutant Lung Cancer
Lee, H., Cai, F., Kelekar, N., Velupally, N., & Kim, J. (2022) · Cells · doi:10.3390/cells11010176 · Cited by 21
A triple exon-skipping luciferase reporter assay identifies a new CLK inhibitor pharmacophore
Shi, Y. H., Park, J., Lagisetti, C., Zhou, W., Sambucetti, L. C., & Webb, T. R. (2016) · Bioorganic & Medicinal Chemistry Letters · doi:10.1016/j.bmcl.2016.12.056 · Cited by 21
Mechanism of error-free replication across benzo[a]pyrene stereoisomers by Rev1 DNA polymerase
Rechkoblit, O., Kolbanovskiy, A., Landes, H., Geacintov, N. E., & Aggarwal, A. K. (2017) · Nature Communications · doi:10.1038/s41467-017-01013-5 · Cited by 20
Tang, D., Zhao, Y. C., Qian, D., Liu, H., Luo, S., Patz, E. F., Moorman, P. G., Su, L., Shen, S., Christiani, D. C., et al. (2019) · Molecular Carcinogenesis · doi:10.1002/mc.23132 · Cited by 20
Supervised mutational signatures for obesity and other tissue-specific etiological factors in cancer
Afsari, B., Kuo, A., Zhang, Y., Li, L., Lahouel, K., Danilova, L., Favorov, A. V., Rosenquist, T. A., Grollman, A. P., Kinzler, K. W., et al. (2021) · eLife · doi:10.7554/elife.61082 · Cited by 20
Sinha, A., Zou, Y., Patel, A. S., Yoo, S., Jiang, F., Sato, T., Kong, R., Watanabe, H., Zhu, J., Massion, P. P., et al. (2022) · Cancers · doi:10.3390/cancers14030708 · Cited by 20
Srivastava, R., & Lodhi, N. (2022) · Biomolecules · doi:10.3390/biom12030417 · Cited by 22
Paradoxical Behavior of Oncogenes Undermines the Somatic Mutation Theory
Monti, N., Verna, R., Piombarolo, A., Querqui, A., Bizzarri, M., & Fedeli, V. (2022) · Biomolecules · doi:10.3390/biom12050662 · Cited by 21
Li, J., Long, Y., Sun, J., Wu, J., He, X. H., Wang, S., Wang, X., Miao, X., Huang, R., & Yan, J. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.931132 · Cited by 19
The Impact of ETV6-NTRK3 Oncogenic Gene Fusions on Molecular and Signaling Pathway Alterations
Kinnunen, M., Liu, X., Niemelä, E. H., Öhman, T., Gawriyski, L. M., Salokas, K., Keskitalo, S., & Varjosalo, M. T. (2023) · Cancers · doi:10.3390/cancers15174246 · Cited by 22
Mutations in the Serine/Threonine Kinase BRAF: Oncogenic Drivers in Solid Tumors
Roa, P., Bremer, N. V., Foglizzo, V., & Cocco, E. (2024) · Cancers · doi:10.3390/cancers16061215 · Cited by 26
RAD51 variant proteins from human lung and kidney tumors exhibit DNA strand exchange defects
Silva, M. C., Morrical, M. D., Bryan, K. E., Averill, A. M., Dragon, J. A., Bond, J. P., & Morrical, S. W. (2016) · DNA repair · doi:10.1016/j.dnarep.2016.02.008 · Cited by 20
Berz, D., Raymond, V. M., Garst, J. H., & Erlander, M. G. (2015) · Experimental Hematology and Oncology · doi:10.1186/s40164-016-0052-3 · Cited by 20
A quantitative method for assessing smoke associated molecular damage in lung cancers
Song, K., Bi, J.-H., Qiu, Z.-W., Felizardo, R., Girard, L., Minna, J. D., & Gazdar, A. F. (2018) · Translational Lung Cancer Research · doi:10.21037/tlcr.2018.07.01 · Cited by 20
Blood‐based circulating tumor DNA mutations as a diagnostic and prognostic biomarker for lung cancer
Leung, M., Freidin, M. B., Freydin, M., Crease, C. V., Sousa, P. D., Barbosa, M. T., Nicholson, A. G., & Lim, E. K. S. (2020) · Cancer · doi:10.1002/cncr.32699 · Cited by 20
Ren, P., Chang, L., Hong, X., Xing, L., & Zhang, H. (2021) · Cancer Cell International · doi:10.1186/s12935-021-01994-w · Cited by 20
Moens, L., Falk-Sörqvist, E., Ljungström, V., Mattsson, J. S. M., Sundström, M., Fleur, L. L., Mathot, L., Micke, P., Nilsson, M. F., & Botling, J. (2015) · Journal of Molecular Diagnostics · doi:10.1016/j.jmoldx.2015.06.009 · Cited by 21
Martin, B. T., Serrano, P., Geralt, M., & Wüthrich, K. (2015) · Structure · doi:10.1016/j.str.2015.10.029 · Cited by 20
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Metadata
- Authors
- Imielinski, M., Berger, A. H., Hammerman, P. S., Hernandez, B., Pugh, T. J., Hodis, E., Cho, J., Suh, J., Capelletti, M., Sivachenko, A., Sougnez, C., Auclair, D., Lawrence, M. S., Stojanov, P., Cibulskis, K., Choi, K., de Waal, L., Sharifnia, T., Brooks, A., Greulich, H., Banerji, S., Zander, T., Seidel, D., Leenders, F., Ansén, S., Ludwig, C., Engel-Riedel, W., Stoelben, E., Wolf, J., Goparju, C., Thompson, K., Winckler, W., Kwiatkowski, D., Johnson, B. E., Jänne, P. A., Miller, V. A., Pao, W., Travis, W. D., Pass, H. I., Gabriel, S. B., Lander, E. S., Thomas, R. K., Garraway, L. A., Getz, G., & Meyerson, M.
- Affiliations
- Broad Institute (US)
- Samsung Medical Center (KR)
- NYU Langone Health (US)
- Dana-Farber Cancer Institute (US)
- University of Cologne (DE)
- Memorial Sloan Kettering Cancer Center (US)
- Vanderbilt University (US)
- Corresponding author
- Meyerson, Matthew
- ORCID
- Imielinski, Marcin
- Berger, Alice H.
- Hammerman, Peter S.
- Hernandez, Bryan
- Pugh, Trevor J.
- Hodis, Eran
- Cho, Jeonghee
- Suh, James
- Capelletti, Marzia
- Sivachenko, Andrey
- Auclair, Daniel
- Lawrence, Michael S.
- Cibulskis, Kristian
- Sharifnia, Tanaz
- Brooks, Angela
- Greulich, Heidi
- Banerji, Shantanu
- Zander, Thomas
- Seidel, Danila
- Stoelben, Erich
- Wolf, Jürgen
- Winckler, Wendy
- Kwiatkowski, David
- Johnson, Bruce E.
- Miller, Vincent A.
- Pao, William
- Travis, William D.
- Pass, Harvey I.
- Gabriel, Stacey B.
- Lander, Eric S.
- Thomas, Roman K.
- Garraway, Levi A.
- Getz, Gad
- Meyerson, Matthew
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2012-09
- Volume
- 150
- Issue
- 6
- Pages
- 1107-1120
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC3557932
- OpenAlex
- W2042386784
- Cited by
- 1,789
- References
- 79
- Citations by year
- 2026: 38 · 2025: 66 · 2024: 81 · 2023: 94 · 2022: 124 · 2021: 128 · 2020: 155 · 2019: 131 · 2018: 138 · 2017: 138 · 2016: 145 · 2015: 187 · 2014: 199 · 2013: 148 · 2012: 14
- FWCI
- 141.24
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
- www.elsevier.com/open-access/userlicense/1.0/ (vor, 380 d)
- doi.org/10.15223/policy-017 (stm-asf)
- doi.org/10.15223/policy-037 (stm-asf)
- doi.org/10.15223/policy-012 (stm-asf)
- doi.org/10.15223/policy-029 (stm-asf)
- doi.org/10.15223/policy-004 (stm-asf)
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- Kölner Universitäts PublikationsServer (Universität zu Köln) (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- DSpace@MIT (Massachusetts Institute of Technology) (submittedVersion, cc-by-nc)
- Max Planck Institute for Plasma Physics (submittedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Funders
- Broad Institute
- Canadian Institutes of Health Research
- National Human Genome Research Institute (U54HG003067)
- National Cancer Institute (R01CA109038, R01CA116020, T32 CA9216, P50CA090578, T32CA009216)
- National Institute of General Medical Sciences (T32 GM07753, T32GM007753)
- Topics
- Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Lung Cancer Treatments and Mutations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer Genomics and Diagnostics
- Health Sciences › Medicine › Oncology › Lung Cancer Research Studies
- Keywords
- lung adenocarcinoma, somatic mutations, mutational signatures, U2AF1, RBM10, ARID1A, structural rearrangement, EGFR, SIK2, smoking history, cancer genomics, therapeutic target
- MeSH terms
- Adenocarcinoma of Lung, Adenocarcinoma, Adult, Aged, Aged, 80 and over, Carcinoma, Non-Small-Cell Lung, Female, Humans, Lung Neoplasms, Male, Middle Aged, Mutation, Cohort Studies, Genes, Neoplasm, Genome-Wide Association Study, High-Throughput Nucleotide Sequencing, Exome, Mutation Rate
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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