Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

Levine, Jacob H., Simonds, Erin F., Bendall, Sean C., Davis, Kara L., Amir, El-ad D., Tadmor, Michelle D., Litvin, Oren, Fienberg, Harris G. +8 more·2015·Cell
DOI 10.1016/j.cell.2015.05.047

Cited by (124)

Items 101–124 of 124

  1. An integrative machine learning approach for prediction of toxicity-related drug safety
    Lysenko, Artem, Sharma, Alok, Boroevich, Keith A, Tsunoda, Tatsuhiko · 2018 · Life Science Alliance
  2. Single-Cell Transcriptomics Reveals Early Emergence of Liver Parenchymal and Non-parenchymal Cell Lineages
    Lotto, Jeremy, Drissler, Sibyl, Cullum, Rebecca, Wei, Wei, Setty, Manu, Bell, Erin M., Boutet, Stéphane C., Nowotschin, Sonja, Kuo, Ying-Yi, Garg, Vidur et al. · 2020 · Cell
  3. <i>Escherichia coli</i> –Specific CXCL13-Producing TFH Are Associated with Clinical Efficacy of Neoadjuvant PD-1 Blockade against Muscle-Invasive Bladder Cancer
    Goubet, Anne-Gaëlle, Lordello, Leonardo, Alves Costa Silva, Carolina, Peguillet, Isabelle, Gazzano, Marianne, Mbogning-Fonkou, Maxime Descartes, Thelemaque, Cassandra, Lebacle, Cédric, Thibault, Constance, Audenet, François et al. · 2022 · Cancer Discovery
  4. Autoantigen-specific CD4+ T cells acquire an exhausted phenotype and persist in human antigen-specific autoimmune diseases
    Saggau, Carina, Bacher, Petra, Esser, Daniela, Rasa, Mahdi, Meise, Silja, Mohr, Nicola, Kohlstedt, Nora, Hutloff, Andreas, Schacht, Sarah-Sophie, Dargvainiene, Justina et al. · 2024 · Immunity
  5. Opioid-induced fragile-like regulatory T cells contribute to withdrawal
    Zhu, Yongsheng, Yan, Peng, Wang, Rui, Lai, Jianghua, Tang, Hua, Xiao, Xu, Yu, Rongshan, Bao, Xiaorui, Zhu, Feng, Wang, Kena et al. · 2023 · Cell
  6. Valid Post-clustering Differential Analysis for Single-Cell RNA-Seq
    Zhang, Jesse M., Kamath, Govinda M., Tse, David N. · 2019 · Cell Systems
  7. Automatic cell type identification methods for single-cell RNA sequencing
    Xie, Bingbing, Jiang, Qin, Mora, Antonio, Li, Xuri · 2021 · Computational and Structural Biotechnology Journal
  8. Intrahepatic CD206+ macrophages contribute to inflammation in advanced viral-related liver disease
    Tan-Garcia, Alfonso, Wai, Lu-En, Zheng, Dahai, Ceccarello, Erica, Jo, Juandy, Banu, Nasirah, Khakpoor, Atefeh, Chia, Adeline, Tham, Christine Y.L., Tan, Anthony T. et al. · 2017 · Journal of Hepatology
  9. Uncovering axes of variation among single-cell cancer specimens
    Chen, William S., Zivanovic, Nevena, van Dijk, David, Wolf, Guy, Bodenmiller, Bernd, Krishnaswamy, Smita · 2020 · Nature Methods
  10. High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia
    Pelissier Vatter, Fanny A., Schapiro, Denis, Chang, Hang, Borowsky, Alexander D., Lee, Jonathan K., Parvin, Bahram, Stampfer, Martha R., LaBarge, Mark A., Bodenmiller, Bernd, Lorens, James B. · 2018 · Cell Reports
  11. Single-cell mass cytometry reveals complex myeloid cell composition in active lesions of progressive multiple sclerosis
    Böttcher, Chotima, van der Poel, Marlijn, Fernández-Zapata, Camila, Schlickeiser, Stephan, Leman, Julia K. H., Hsiao, Cheng-Chih, Mizee, Mark R., Adelia, Vincenten, Maria C. J., Kunkel, Desiree et al. · 2020 · Acta Neuropathologica Communications
  12. Atherosclerosis in the single-cell era
    Winkels, Holger, Ehinger, Erik, Ghosheh, Yanal, Wolf, Dennis, Ley, Klaus · 2018 · Current Opinion in Lipidology
  13. Removing unwanted variation with CytofRUV to integrate multiple CyTOF datasets
    Trussart, Marie, Teh, Charis E, Tan, Tania, Leong, Lawrence, Gray, Daniel HD, Speed, Terence P · 2020 · eLife
  14. Molecular, spatial and projection diversity of neurons in primary motor cortex revealed by in situ single-cell transcriptomics
    Zhang, Meng, Eichhorn, Stephen W., Zingg, Brian, Yao, Zizhen, Zeng, Hongkui, Dong, Hongwei, Zhuang, Xiaowei · 2020
  15. Discovery of human cell selective effector molecules using single cell multiplexed activity metabolomics
    Earl, David C., Ferrell, P. Brent, Leelatian, Nalin, Froese, Jordan T., Reisman, Benjamin J., Irish, Jonathan M., Bachmann, Brian O. · 2018 · Nature Communications
  16. Untitled work
    Graybuck · 2019 · 10.1101/525014
  17. scMODAL: a general deep learning framework for comprehensive single-cell multi-omics data alignment with feature links
    Wang, Gefei, Zhao, Jia, Lin, Yingxin, Liu, Tianyu, Zhao, Yize, Zhao, Hongyu · 2025 · Nature Communications
  18. Single-Cell RNA Sequencing for Studying Human Cancers
    Aran, Dvir · 2023 · Annual Review of Biomedical Data Science
  19. Guidelines for standardizing T-cell cytometry assays to link biomarkers, mechanisms, and disease outcomes in type 1 diabetes
    Yang, Jennie H. M., Ward‐Hartstonge, Kirsten A., Perry, Daniel J., Blanchfield, J. Lori, Posgai, Amanda L., Wiedeman, Alice E., Diggins, Kirsten, Rahman, Adeeb, Tree, Timothy I. M., Brusko, Todd M. et al. · 2022 · European Journal of Immunology
  20. Cell diversity and plasticity during atrioventricular heart valve EMTs
    Lotto, Jeremy, Cullum, Rebecca, Drissler, Sibyl, Arostegui, Martin, Garside, Victoria C., Fuglerud, Bettina M., Clement-Ranney, Makenna, Thakur, Avinash, Underhill, T. Michael, Hoodless, Pamela A. · 2023 · Nature Communications
  21. Expression quantitative trait locus studies in the era of single-cell omics
    Luo, Jie, Wu, Xinyi, Cheng, Yuan, Chen, Guang, Wang, Jian, Song, Xijiao · 2023 · Frontiers in Genetics
  22. A perspective on integrating digital pathology, proteomics, clinical data and AI analytics in cancer research
    Guedes, Jéssica, Woldmar, Nicole, Szasz, A. Marcell, Wieslander, Elisabet, Pawłowski, Krysztof, Horvatovich, Peter, Malm, Johan, Szadai, Leticia, Németh, István Balázs, Marko-Varga, György et al. · 2025 · Journal of Proteomics
  23. Single-cell profiling reveals the dynamics of cytomegalovirus-specific T cells in haploidentical hematopoietic stem cell transplantation
    Van Beek, Jasper J. P., Puccio, Simone, Roberto, Alessandra, De Paoli, Federica, Graziano, Giulia, Salviato, Elisa, Alvisi, Giorgia, Zanon, Veronica, Scarpa, Alice, Zaghi, Elisa et al. · 2021 · Haematologica
  24. Morphological pseudotime ordering and fate mapping reveals diversification of cerebellar inhibitory interneurons
    Wang, Wendy Xueyi, Lefebvre, Julie L. · 2020