Cohesin Loss Eliminates All Loop Domains
Rao, Suhas S.P., Huang, Su-Chen, Glenn St Hilaire, Brian, Engreitz, Jesse M., Perez, Elizabeth M., Kieffer-Kwon, Kyong-Rim, Sanborn, Adrian L., Johnstone, Sarah E. +14 more·2017·Cell
Cited by (1,002)
Items 301–400 of 1,002
- CTCF and transcription influence chromatin structure re-configuration after mitosisHao-Yue Zhang, Jessica C Lam, Di Zhang, Y. Lan, M. Vermunt, Cheryl A. Keller, B. Giardine, R. Hardison, G. Blobel · 2021 · Nature Communications
- Cohesion and cohesin-dependent chromatin organizationTomoko Nishiyama · 2018 · Current Opinion in Cell Biology
- Functions of DEAD box RNA helicases DDX5 and DDX17 in chromatin organization and transcriptional regulationGuillaume Giraud, Sophie Terrone, Cyril F. Bourgeois · 2018 · BMB Reports
- Spatial Genome Re-organization between Fetal and Adult Hematopoietic Stem CellsChang-Ya Chen, Wen-Bao Yu, Joanna Tober, Peng Gao, Bing He, Kiwon Lee, Tuan Trieu, G. Blobel, N. Speck, Kai Tan · 2019 · bioRxiv
- The cohesin acetylation cycle controls chromatin loop length through a PDS5A brake mechanismM. S. van Ruiten, Démi van Gent, Ángela Sedeño Cacciatore, Astrid Fauster, Laureen Willems, M. Hekkelman, L. Hoekman, M. Altelaar, J. Haarhuis, T. Brummelkamp et al. · 2022 · Nature Structural & Molecular Biology
- Epigenetic and Transcriptional Networks Underlying Atrial FibrillationAntoinette F. van Ouwerkerk, Amelia Weber Hall, Zachary A. Kadow, Sonja Lazarevic, Jasmeet Singh Reyat, Nathan R. Tucker, Rangarajan D. Nadadur, Fernanda M. Bosada, Valerio Bianchi, Patrick T. Ellinor et al. · 2020 · Circulation Research
- Mesoscale Modeling and Single-Nucleosome Tracking Reveal Remodeling of Clutch Folding and Dynamics in Stem Cell DifferentiationPablo Aurelio Gómez-García, Stephanie Portillo‐Ledesma, Maria Victoria Neguembor, Martina Pesaresi, Walaa Oweis, Talia Miriam Rohrlich, Stefan Wieser, Eran Meshorer, Tamar Schlick A, Maria Pia Cosma et al. · 2021 · Cell Reports
- Noncoding RNA processing by DIS3 regulates chromosomal architecture and somatic hypermutation in B cellsBrice Laffleur, Junghyun Lim, Wanwei Zhang, Yiyun Chen, Evangelos Pefanis, Jonathan Bizarro, Carolina R. Batista, Lijing Wu, Aris N. Economides, Jiguang Wang et al. · 2021 · Nature Genetics
- A cohesin traffic pattern genetically linked to gene regulationAnne-Laure Valton, Sergey V. Venev, Barbara Mair, Eraj Shafiq Khokhar, Amy H.Y. Tong, Matej Ušaj, Katherine Chan, Athma A. Pai, Jason Moffat, Job Dekker · 2022 · Nature Structural & Molecular Biology
- Order and stochasticity in the folding of individual Drosophila genomesUlianov, Sergey V., Zakharova, Vlada V., Galitsyna, Aleksandra A., Kos, Pavel I., Polovnikov, Kirill E., Flyamer, Ilya M., Mikhaleva, Elena A., Khrameeva, Ekaterina E., Germini, Diego, Logacheva, Mariya D. et al. · 2021 · Nature Communications
- Histone acetylation dynamics modulates chromatin conformation and allele-specific interactions at oncogenic lociSungalee, Stephanie, Liu, Yuanlong, Lambuta, Ruxandra A., Katanayeva, Natalya, Donaldson Collier, Maria, Tavernari, Daniele, Roulland, Sandrine, Ciriello, Giovanni, Oricchio, Elisa · 2021 · Nature Genetics
- Histone H3K9 methylation promotes formation of genome compartments in Caenorhabditis elegans via chromosome compaction and perinuclear anchoringQian Bian, Erika C. Anderson, Qiming Yang, Barbara J Meyer · 2020 · Proceedings of the National Academy of Sciences
- In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulationChiara Anania, Rafael D. Acemel, Johanna Jedamzick, Adriano Bolondi, Giulia Cova, Norbert Brieske, Ralf Kühn, Lars Wittler, Francisca Martinez Real, Darío G. Lupiáñez · 2022 · Nature Genetics
- Understanding the 3D genome: Emerging impacts on human diseaseAnton Krumm, Zhijun Duan · 2018 · Seminars in Cell and Developmental Biology
- Sister DNA Entrapment between Juxtaposed Smc Heads and Kleisin of the Cohesin ComplexChristophe Chapard, Robert Jones, Till van Oepen, Johanna C. Scheinost, Kim Nasmyth · 2019 · Molecular Cell
- Olfactory receptor genes make the case for inter-chromosomal interactionsElizaveta Bashkirova, Stavros Lomvardas · 2019 · Current Opinion in Genetics & Development
- Calcium signaling instructs NIPBL recruitment at active enhancers and promoters via distinct mechanisms to reconstruct genome compartmentalizationYina Zhu, Matthew Denholtz, Hanbin Lu, Cornelis Murre · 2020 · Genes & Development
- Physical Nature of Chromatin in the NucleusKazuhiro Maeshima, Shiori Iida, Sachiko Tamura · 2021 · Cold Spring Harbor Perspectives in Biology
- Specialized functions of cohesins STAG1 and STAG2 in 3D genome architectureAna Cuadrado, Ana Losada · 2020 · Current Opinion in Genetics & Development
- Supercharging BRD4 with NUT in carcinomaKyle P. Eagen, Christopher Alexander French · 2021 · Oncogene
- CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loopsYu Guo, Andrew A. Perez, D. Hazelett, G. Coetzee, S. Rhie, P. Farnham · 2018 · Genome Biology
- Generation of dynamic three-dimensional genome structure through phase separation of chromatinShin Fujishiro, Masaki Sasai · 2022 · Proceedings of the National Academy of Sciences
- Crumpled Polymer with Loops Recapitulates Key Features of Chromosome OrganizationKirill Polovnikov, Bogdan Slavov, Sergey Belan, Maxim Imakaev, Hugo B. Brandão, Leonid A. Mirny · 2023 · Physical Review X
- High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastomaMichael J.G. Johnston, Ana Nikolić, Nicoletta Ninkovic, Paul Guilhamon, Florence M.G. Cavalli, Steven Seaman, Franz J. Zemp, John Lee, Aly O. Abdelkareem, Katrina I Ellestad et al. · 2019 · Genome Research
- Mammalian DNA Replication TimingAthanasios E Vouzas, David M. Gilbert · 2021 · Cold Spring Harbor Perspectives in Biology
- Order and disorder: abnormal 3D chromatin organization in human diseaseChiara Anania, Darío G. Lupiáñez · 2019 · Briefings in Functional Genomics
- CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expressionMartin Franke, Elisa de la Calle‐Mustienes, Ana Neto, María Almuedo‐Castillo, Ibai Irastorza-Azcárate, Rafael D. Acemel, Juan J. Tena, José M. Santos-Pereira, José Luis Gómez-Skármeta · 2021 · Nature Communications
- 3D chromatin architecture and transcription regulation in cancerSi-Wei Deng, Yu-Liang Feng, S. Pauklin · 2022 · Journal of Hematology & Oncology
- Smc3 acetylation, Pds5 and Scc2 control the translocase activity that establishes cohesin-dependent chromatin loopsNathalie Bastié, Christophe Chapard, Lise Dauban, Olivier Gadal, Frédéric Beckouët, Romain Koszul · 2022 · Nature Structural & Molecular Biology
- Chromatin Architecture in the Fly: Living without CTCF/Cohesin Loop Extrusion?Nicholas E. Matthews, Robert A. White · 2019 · BioEssays
- Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in ArabidopsisYing Huang, Sanchari Sicar, J. S. Ramirez-Prado, Deborah Manza-Mianza, Javier Antunez-Sanchez, Rim Brik-Chaouche, N. R. Rodriguez-Granados, Jing An, C. Bergounioux, Magdy M. Mahfouz et al. · 2021 · Genome Research
- Pericentromeric noncoding RNA changes DNA binding of CTCF and inflammatory gene expression in senescence and cancerMiyata, Kenichi, Imai, Yoshinori, Hori, Satoshi, Nishio, Mika, Loo, Tze Mun, Okada, Ryo, Yang, Liying, Nakadai, Tomoyoshi, Maruyama, Reo, Fujii, Risa et al. · 2021 · Proceedings of the National Academy of Sciences
- Tracing DNA paths and RNA profiles in cultured cells and tissues with ORCALeslie J. Mateo, Nasa Sinnott-Armstrong, Alistair Nicol Boettiger · 2021 · Nature Protocols
- Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forksKristian E. Jeppsson, Toyonori Sakata, Ryuichiro Nakato, Stefina Milanova, Katsuhiko Shirahige, Camilla Björkegren · 2022 · Science Advances
- Chromatin jets define the properties of cohesin-driven in vivo loop extrusion.Ya Guo, Ediem Al-Jibury, Rosalba Garcia-Millan, Konstantinos Ntagiantas, James W D King, Alexander J. Nash, N. Galjart, B. Lenhard, D. Rueckert, A. Fisher et al. · 2022 · Molecules and Cells
- TADs: Dynamic structures to create stable regulatory functionsJosé A. da Costa-Nunes, Daan Noordermeer · 2023 · Current Opinion in Structural Biology
- How the Genome Folds: The Biophysics of Four-Dimensional Chromatin OrganizationJyotsana J. Parmar, Maxime Woringer, Christophe Zimmer · 2019 · Annual Review of Biophysics
- Enhancer LncRNAs Influence Chromatin Interactions in Different WaysYue Hou, Rongxin Zhang, Xiao Song Sun · 2019 · Frontiers in Genetics
- Cornelia de Lange syndrome: from molecular diagnosis to therapeutic approachPatrizia Sarogni, Maria Michela Pallotta, Antonio Musio · 2019 · Journal of Medical Genetics
- Biomolecular Modeling and Simulation: A Prospering Multidisciplinary FieldTamar Schlick A, Stephanie Portillo‐Ledesma, Christopher G. Myers, Lauren Beljak, Justin B. Chen, Sami Dakhel, Daniel Darling, Sayak Ghosh, Joseph W. Hall, Mikaeel Jan et al. · 2021 · Annual Review of Biophysics
- Computational prediction of CTCF/cohesin-based intra-TAD loops that insulate chromatin contacts and gene expression in mouse liverB. Matthews, D. Waxman · 2018 · eLife
- Monitoring the spatio-temporal organization and dynamics of the genomeH. Shaban, A. Seeber · 2020 · Nucleic Acids Research
- Mechanisms of Enhancer-Promoter Interactions in Higher EukaryotesPavel G Georgiev, Olga Kyrchanova · 2021 · International Journal of Molecular Sciences
- Whole-genome doubling drives oncogenic loss of chromatin segregationRuxandra A. Lambuta, Luca Nanni, Yuanlong Liu, Juan Díaz-Miyar, Arvind Iyer, Daniele Tavernari, Natalya Katanayeva, Giovanni Ciriello, Elisa Oricchio · 2023 · Nature
- Virtual-reality applications give science a new dimensionDAVID A. MATTHEWS · 2018 · Nature
- Accurate loop calling for 3D genomic data with cLoopsYaqiang Cao, Zhaoxiong Chen, Xingwei Chen, Daosheng Ai, Guoyu Chen, Joseph McDermott, Yi Huang, Xiaoxiao Guo, Jing‐Dong J. Han · 2019 · Bioinformatics
- Structural elements promote architectural stripe formation and facilitate ultra-long-range gene regulation at a human disease locusChen, Liang-Fu, Long, Hannah Katherine, Park, Minhee, Swigut, Tomek, Boettiger, Alistair Nicol, Wysocka, Joanna · 2023 · Molecular Cell
- The replicative helicase MCM recruits cohesin acetyltransferase ESCO2 to mediate centromeric sister chromatid cohesionMiroslav Penchev Ivanov, René Ladurner, Ina Poser, Rebecca Beveridge, Evelyn Rampler, Otto Hudecz, Maria Novatchkova, Jean-Karim Hèriché, Gordana Wutz, Petra van der Lelij et al. · 2018 · The EMBO Journal
- Cohesion is established during DNA replication utilising chromosome associated cohesin rings as well as those loaded de novo onto nascent DNAsMadhusudhan Srinivasan, Marco Fumasoni, Naomi J Petela, Andrew W. Murray, Kim Nasmyth · 2020 · eLife
- Transcription factors: building hubs in the 3D spaceDafne Campigli Di Giammartino, Alexander Polyzos, Effie Apostolou · 2020 · Cell Cycle
- Opposing Effects of Cohesin and Transcription on CTCF Organization Revealed by Super-resolution ImagingBo Gu, Colin J. Comerci, Dannielle G. McCarthy, Saumya Saurabh, W. E. Moerner, Joanna Wysocka · 2020 · Molecular Cell
- BRD2 Compartmentalizes the Accessible GenomeLiang-Qi Xie, Peng Dong, Yifeng Qi, Tsung-Han S. Hsieh, Brian P. English, Seolkyoung Jung, Xing-Qi Chen, M. De Marzio, R. Casellas, Howard Y. Chang et al. · 2022 · Nature Genetics
- A walk through the SMC cycle: From catching DNAs to shaping the genomeRoel Oldenkamp, Benjamin D. Rowland · 2022 · Molecular Cell
- Applications of deep learning in understanding gene regulationZhongxiao Li, Elva Gao, Juexiao Zhou, Wenkai Han, Xiaopeng Xu, Xin Gao · 2023 · Cell Reports Methods
- The impact of DNA methylation on CTCF-mediated 3D genome organizationAna Monteagudo, Daan Noordermeer, Max Greenberg · 2024 · Nature Structural & Molecular Biology
- Signaling by Steroid Hormones in the 3D Nuclear SpaceFrançois Le Dily, Miguel Beato · 2018 · International Journal of Molecular Sciences
- Circadian rhythms in the three-dimensional genome: implications of chromatin interactions for cyclic transcriptionIgnacio Pacheco-Bernal, Fernando Becerril-Pérez, Lorena Aguilar‐Arnal · 2019 · Clinical Epigenetics
- Three-dimensional chromatin in disease: What holds us together and what drives us apart?Daniel M. Ibrahim, Stefan Mundlos · 2020 · Current Opinion in Cell Biology
- Analysis of Genome Architecture during SCNT Reveals a Role of Cohesin in Impeding Minor ZGA.Kecheng Zhang, Danya Wu, Hui Zheng, Yao Wang, Qiao-Ran Sun, Xin Liu, Liyan Wang, Wen-Jing Xiong, Qiu-Jun Wang, J. Rhodes et al. · 2020 · Molecules and Cells
- The interdependence of gene-regulatory elements and the 3D genomeMarit Willemijn Vermunt, Di Zhang, Gerd A. Blobel · 2018 · The Journal of Cell Biology
- Nonlinear control of transcription through enhancer-promoter interactionsZuin, Jessica, Roth, Gregory, Zhan, Yinxiu, Cramard, Julie, Redolfi, Josef, Piskadlo, Ewa, Mach, Pia, Kryzhanovska, Mariya, Tihanyi, Gergely, Kohler, Hubertus et al. · 2021
- Megadomains and superloops form dynamically but are dispensable for X-chromosome inactivation and gene escapeJohn E. Froberg, Stefan F. Pinter, Andrea J. Kriz, Teddy Jégu, Jeannie T. Lee · 2018 · Nature Communications
- Temporally distinct 3D multi-omic dynamics in the developing human brainMatthew G. Heffel, Jingtian Zhou, Yi Zhang, Dong-Sung Lee, Kangcheng Hou, Oier Pastor-Alonso, Kevin Daniel Abuhanna, Joseph Galasso, Colin Kern, Chu‐Yi Tai et al. · 2024 · Nature
- Synergy of topoisomerase and structural-maintenance-of-chromosomes proteins creates a universal pathway to simplify genome topologyEnzo Orlandini, Davide Marenduzzo, Davide Michieletto · 2019 · Proceedings of the National Academy of Sciences
- A TAD Skeptic: Is 3D Genome Topology Conserved?Ittai E. Eres, Yoav Gilad · 2020 · Trends in Genetics
- Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatinLuca Fiorillo, Francesco Musella, Mattia Conte, Rieke Kempfer, Andrea M. Chiariello, Simona Bianco, Alexander Kukalev, Ibai Irastorza-Azcárate, Andrea Esposito, Alex Abraham et al. · 2021 · Nature Methods
- Xist RNA antagonizes the SWI/SNF chromatin remodeler BRG1 on the inactive X chromosomeTeddy Jégu, Roy Blum, Jesse C. Cochrane, Lin Yang, Chen‐Yu Wang, Maud-Emmanuelle Gilles, David Colognori, Attila Szántó, Sharon K. Marr, Robert E. Kingston et al. · 2019 · Nature Structural & Molecular Biology
- Defining the relative and combined contribution of CTCF and CTCFL to genomic regulationMayilaadumveettil Nishana, Caryn J. Ha, Javier Rodriguez-Hernaez, Ali Ranjbaran, Erica Chio, Elphège Pierre Nora, Sana Badri, Andreas Kloetgen, Benoit G. Bruneau, Aristotelis Tsirigos et al. · 2020 · Genome biology
- Three-dimensional folding dynamics of the Xenopus tropicalis genomeLongjian Niu, Wei Shen, Zhaoying Shi, Yongjun Tan, Na He, Jing Wan, Jialei Sun, Yuedong Zhang, Yingzhang Huang, Wenjing Wang et al. · 2021 · Nature Genetics
- DeepMILO: a deep learning approach to predict the impact of non-coding sequence variants on 3D chromatin structureTuan Trieu, Alexander Martinez‐Fundichely, Ekta Khurana · 2020 · Genome biology
- Cohesin: behind dynamic genome topology and gene expression reprogrammingCarlos Perea-Resa, Lauren Wattendorf, Sammer Marzouk, Michael D. Blower · 2021 · Trends in Cell Biology
- Interplay between CTCF boundaries and a super enhancer controls cohesin extrusion trajectories and gene expressionErica S.M. Vos, Christian Valdes‐Quezada, Yike Huang, Amin Allahyar, Marjon J.A.M. Verstegen, Anna-Karina Felder, Floor van der Vegt, Esther C. H. Uijttewaal, Peter H.L. Krijger, Wouter L. de Laat · 2021 · Molecular Cell
- Multi-feature clustering of CTCF binding creates robustness for loop extrusion blocking and Topologically Associating Domain boundariesLi-Hsin Chang, Sourav Ghosh, A. Papale, Jennifer M. Luppino, Mélanie Miranda, Vincent Piras, J. Degrouard, Joanne Edouard, M. Poncelet, Nathan Lecouvreur et al. · 2023 · Nature Communications
- Single-cell multiplex chromatin and RNA interactions in ageing human brainXingzhao Wen, Zhifei Luo, Wenxin Zhao, Riccardo Calandrelli, Tri C. Nguyen, Xueyi Wan, John Lalith Charles Richard, Sheng Zhong · 2024 · Nature
- Understanding 3D Genome Organization and Its Effect on Transcriptional Gene Regulation Under Environmental Stress in Plant: A Chromatin PerspectiveSuresh Kumar, Simardeep Kaur, Karishma Seem, Santosh Kumar, Trilochan Mohapatra · 2021 · Frontiers in Cell and Developmental Biology
- Essential role of Cp190 in physical and regulatory boundary formationAnjali Kaushal, Julien Dorier, Bihan Wang, Giriram Mohana, Michael Taschner, Pascal Cousin, Patrice Waridel, Christian Iseli, Anastasiia Semenova, Simon Restrepo et al. · 2022 · Science Advances
- CTCF organizes inter-A compartment interactions through RYBP-dependent phase separationChao Wei, L. Jia, Xiaona Huang, Jin Tan, Mulan Wang, Jing Niu, Yingping Hou, Jun-Yi Sun, Pengguihang Zeng, Jia Wang et al. · 2022 · Cell Research
- Single-cell multiregion epigenomic rewiring in Alzheimer’s disease progression and cognitive resilienceZunpeng Liu, Shanshan Zhang, Benjamin T. James, Kyriaki Galani, Riley J. Mangan, Stuart B. Fass, Chuqian Liang, Manoj M Wagle, Carles A. Boix, Yosuke Tanigawa et al. · 2025 · Cell
- The 10-nm chromatin fiber and its relationship to interphase chromosome organizationJeffrey C. Hansen, Mark Connolly, Charles J. McDonald, Anyu Pan, Anna Pryamkova, Kyle P. Ray, Erik Seidel, Sachiko Tamura, Ryan A. Rogge, Kazuhiro Maeshima · 2017 · Biochemical Society Transactions
- Disruption of nuclear speckles reduces chromatin interactions in active compartmentsShibin Hu, Pin Lv, Zixiang Yan, Bo Wen · 2019 · Epigenetics & Chromatin
- LDB1 establishes multi-enhancer networks to regulate gene expressionAboreden, Nicholas G., Lam, Jessica C., Goel, Viraat Y., Wang, Siqing, Wang, Xiaokang, Midla, Susannah C., Quijano, Alma, Keller, Cheryl A., Giardine, Belinda M., Hardison, Ross C. et al. · 2025 · Molecular Cell
- The multiple facets of the SMC1A geneAntonio Musio · 2020 · Gene
- Spatial Organization of Chromatin: Emergence of Chromatin Structure During DevelopmentRajarshi P. Ghosh, Barbara J Meyer · 2021 · Annual Review of Cell and Developmental Biology
- Positive Regulation of Estrogen Receptor Alpha in Breast TumorigenesisLucas Porras, Houssam Ismail, Sylvie Mader · 2021 · Cells
- An integrated view of the structure and function of the human 4D nucleomeJob Dekker, Betül Akgöl Oksuz, Yang Zhang, Ye Wang, Miriam K. Minsk, Shuzhen Kuang, Liyan Yang, Johan Harmen Gibcus, Nils Krietenstein, Oliver J. Rando et al. · 2025 · Nature
- Cohesin-dependent regulation of gene expression during differentiation is lost in cohesin-mutated myeloid malignanciesDaniel Sasca, Haiyang Yun, George Giotopoulos, Jakub Szybinski, Theodore Evan, Nicola K. Wilson, Moritz Gerstung, Paolo Gallipoli, Anthony Richard Green, Robert Kerrin Hills et al. · 2019 · Blood
- CTCF-dependent chromatin boundaries formed by asymmetric nucleosome arrays with decreased linker lengthChristopher T. Clarkson, Emma A. Deeks, Ralph Samarista, Hulkar Mamayusupova, Victor B. Zhurkin, Vladimir B. Teif · 2019 · Nucleic Acids Research
- Data-Driven Polymer Model for Mechanistic Exploration of Diploid Genome OrganizationYifeng Qi, Alejandro Reyes, Sarah E. Johnstone, Martin J. Aryee, B Bernstein, Bin Zhang · 2020 · Biophysical Journal
- ARID1A facilitates KRAS signaling-regulated enhancer activity in an AP1-dependent manner in colorectal cancer cellsSen, Madhobi, Wang, Xin, Hamdan, Feda H., Rapp, Jacobe, Eggert, Jessica, Kosinsky, Robyn Laura, Wegwitz, Florian, Kutschat, Ana Patricia, Younesi, Fereshteh S., Gaedcke, Jochen et al. · 2019 · Clinical Epigenetics
- CTCF–CTCF loops and intra-TAD interactions show differential dependence on cohesin ring integrityYu Liu, Job Dekker · 2022 · Nature Cell Biology
- RAG Chromatin Scanning During V(D)J Recombination and Chromatin Loop Extrusion are Related ProcessesSherry G. Lin, Zhaoqing Ba, Frederick W. Alt, Yu Zhang · 2018 · Advances in immunology
- Fast-acting chemical tools to delineate causality in transcriptional controlMartin G. Jaeger, Georg E. Winter · 2021 · Molecular Cell
- SMC complexes: Lifting the lid on loop extrusionTorahiko L. Higashi, Frank Uhlmann · 2022 · Current Opinion in Cell Biology
- Full circle: a brief history of cohesin and the regulation of gene expressionJulia A. Horsfield · 2022 · FEBS Journal
- Robust CTCF-Based Chromatin Architecture Underpins Epigenetic Changes in the Heart Failure Stress–Gene ResponseDominic Paul Lee, Wilson Lek Wen Tan, Chukwuemeka George Anene-Nzelu, Chang Jie Mick Lee, Peter Yiqing Li, Tuan Danh Anh Luu, Cheryl Xueli Chan, Zenia Tiang, Shi Ling Ng, Xingfan Huang et al. · 2019 · Circulation
- A model of active transcription hubs that unifies the roles of active promoters and enhancersZhu, Iris, Song, Wei, Ovcharenko, Ivan, Landsman, David · 2021 · Nucleic Acids Research
- Transient DNA Occupancy of the SMC Interarm Space in Prokaryotic CondensinRoberto J. Vazquez Nunez, Laura B. Ruiz Avila, Stephan Gruber · 2019 · Molecular Cell
- Characterization of Button Loci that Promote Homologous Chromosome Pairing and Cell-Type-Specific Interchromosomal Gene RegulationKayla Viets, Michael E.G. Sauria, Chaim Chernoff, Rebecca R. Viales, Max Echterling, Caitlin Anderson, Sang Tran, Abigail Dove, Raghav Goyal, Lukas Voortman et al. · 2019 · Developmental Cell
- Higher-Order Chromosomal Structures Mediate Genome FunctionIvana Jerković, Quentin Szabo, Frédéric Bantignies, Giacomo Cavalli · 2019 · Journal of Molecular Biology
- Defining Functionally Relevant Spatial Chromatin Domains: It is a TAD ComplicatedNatalia Sikorska, Tom Sexton · 2019 · Journal of Molecular Biology