Finding the Missing Links among Metabolites, Microbes, and the Host
Cited by (317)
Items 201–300 of 317
- The Microbiome Factor in Drug Discovery and DevelopmentAndrea Nuzzo, James R. Brown · 2019 · Chemical Research in Toxicology
- Interplay between the Gut Microbiome and Metabolism in Ulcerative Colitis Mice Treated with the Dietary Ingredient PhloretinJie Ren, Puze Li, Dong Yan, Min Li, Jinsong Qi, Mingyong Wang, Genshen Zhong, Minna Wu · 2021 · Journal of Microbiology and Biotechnology
- Fecal Luminal Factors from Patients with Gastrointestinal Diseases Alter Gene Expression Profiles in Caco-2 Cells and ColonoidsLuiza Moraes, Cristina Iribarren, Maria Sapnara, Otto I. Savolainen, Hans Törnblom, Yvonne Wettergren, Hans Strid, Magnus Simrén, Maria K. Magnusson, Lena Öhman · 2022 · International Journal of Molecular Sciences
- Microbial molecules, metabolites, and malignancyRyan Michael Thomas · 2025 · Neoplasia
- Herbal Medicine and Acupuncture Combined Treatment Attenuates Colitis in RatsYu‐Mi Lee, Seung-Ho Seo, Seong-Young Cho, Dong-Hee Choi, Min-Woo Cheon, Hee-Young Kim, Dae-Hwan Youn, Sok Cheon Pak, Hong-Seok Son, Chang-Su Na · 2021 · The American Journal of Chinese Medicine
- The Discovery of Gut Microbial Metabolites as Modulators of Host Susceptibility to Acetaminophen-Induced HepatotoxicityHyun Woo Lee, Xiaotong Yang, Pei-Ru Jin, Kyoung‐Jae Won, Chang H. Kim, Hyunyoung Jeong · 2024 · Drug Metabolism and Disposition
- Getting Our Fingers on the Pulse of Slow-Growing Bacteria in Hard-To-Reach PlacesTara M. Gallagher, Joann L. Phan, Katrine Whiteson · 2018 · Journal of Bacteriology
- Gut microbiome status of urban and rural Filipino adults in relation to diet and metabolic disordersMai Watanabe, Abraham C. Sianoya, Riko Mishima, Phatthanaphong Therdtatha, Abigail Rodriguez, Donna Christene Ramos, Yuan Kun Lee, Leslie Michelle M. Dalmacio, Jiro Nakayama · 2021 · FEMS Microbiology Letters
- Microbiome and Metabolome Contributions to Coral Health and DiseaseMonica D. Schul, Andrea L. Mason, Blake Ushijima, Jennifer M. Sneed · 2022 · Biological Bulletin
- The researcher's guide to selecting biomarkers in mental health studiesJosine E. Verhoeven, Owen M. Wolkowitz, Isaac B. Satz, Quinn A. Conklin, Femke Lamers, Catharina Lavebratt, Jue Lin, Daniel Lindqvist, Stefanie E. Mayer, Philippe A. Melas et al. · 2024 · BioEssays
- Inflammation as a mediator of stress-related psychiatric disordersMichael C. Flux, Christopher A. Lowry · 2022 · Elsevier eBooks
- Bacterial metabolites and cardiovascular risk in children with chronic kidney diseaseJulia Schlender, Felix Behrens, Victoria J. McParland, Dominik N. Müller, Nicola Wilck, Hendrik Bartolomaeus, Johannes Benjamin Holle · 2021 · Molecular and Cellular Pediatrics
- Ethnicity Associated Microbial and Metabonomic Profiling in Newly Diagnosed Ulcerative ColitisRavi Misra, Magali H. Sarafian, Alexandros Pechlivanis, Nik S. Ding, Jesús Miguéns Blanco, Julie A. K. McDonald, Elaine C. Holmes, Julian Roberto Marchesi, Naila Arebi · 2022 · Clinical and Experimental Gastroenterology
- Microbes, Their Metabolites, and Effector Molecules: A Pharmacological Perspective for Host-Microbiota InteractionBharat Bhushan, Brij Pal Singh, Mamta Kumari, Vijendra Mishra, Kamna Saini, Devender Singh · 2019 · Environmental chemistry for a sustainable world
- Gut microbiota and chronic rhinosinusitis: a two-sample Mendelian randomization studyFang Zhang, Boyu Cai, Jing Luo, Yixi Xiao, Yang Tian, Yi Sun, Huanhai Liu, Jianhui Zhang · 2024 · European Archives of Oto-Rhino-Laryngology
- A Focus on Microbiome Completeness and Optimized Colonization Resistance in NeonatologyRodney Reynolds Dietert · 2018 · NeoReviews
- Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACsSachiko Haga‐Yamanaka, Rogelio Nuñez‐Flores, Christi Ann Scott, Sarah Perry, Stephanie Turner Chen, Crystal G. Pontrello, Meera Goh Nair, Anandasankar Ray · 2023 · eLife
- Genetic association between gut microbiota and the risk of Guillain-Barré syndromeFangzheng Cao, Houwen Zhang, Bin Xu, Chunrong Li · 2024 · Journal of Affective Disorders
- Multifaceted effects of the microbiome in pancreatic cancer: from association to modulationRyan Michael Thomas · 2025 · Nature Reviews Gastroenterology & Hepatology
- Conceptual and Computational DFT‐based In Silico Fragmentation Method for the Identification of Metabolite Mass SpectraÉmilie Cauët, Yannick J. Vanhaegenborgh, Frank De Proft, Paul Geerlings · 2020 · Chemistry - Methods
- Effects of Fatty Acids on Hematological Neoplasms: A Mini ReviewSilvia Giannattasio, Maria Dri, Giuseppe Merra, Giovanna Caparello, Tiziana Rampello, Laura Di Renzo · 2021 · Nutrition and Cancer
- Preoperative intestinal microbiome and metabolome in elderly patients with delayed neurocognitive recoveryHongyu Liu, Xueqing Yin, Jiaying Li, Yan Cao, Yanjie Wang, Wenjing Mu, Zipeng Zhuo, Lu Chen, Zhongjie Zhang, Xutong Qu et al. · 2022 · Anaesthesia Critical Care & Pain Medicine
- Fecal microbiota transplantation relieves abdominal bloating in children with functional gastrointestinal disorders via modulating the gut microbiome and metabolomeYi Zhong Wang, Fang Fei Xiao, Yong Mei Xiao, Xiao Lu Li, Hui Hu, Kai Hong, Dan Li, Jun Le, Guang Jun Yu, Ting Zhang · 2022 · Journal of Digestive Diseases
- Microbiota-associated mechanisms underlying sexual dimorphism in hypertensionJohn Henry Dasinger, Bina Joe, Justine M. Abais‐Battad · 2023 · Microbiota and Host
- Exploring Microbial Metabolite Receptors in Inflammatory Bowel Disease: An In Silico Analysis of Their Potential Role in Inflammation and FibrosisMichail Spathakis, Nikolas Dovrolis, Eirini Filidou, Leonidas Kandilogiannakis, Gesthimani Tarapatzi, Vassilis Valatas, Ioannis Drygiannakis, Vasilis Paspaliaris, Konstantinos I. Arvanitidis, Vangelis G. Manolopoulos et al. · 2024 · Pharmaceuticals
- Anti-aging food that improves markers of health in senior dogs by modulating gut microbiota and metabolite profilesEden Ephraim Ephraim Gebreselassie, Matthew Irick Jackson, Maha Yerramilli, Dennis Edward Jewell · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
- Spatial metabolomics of in situ, host-microbe interactionsBenedikt Geier, Emilia M. Sogin, Dolma Michellod, Moritz Janda, Mario Kompauer, Bernhard Spengler, Nicole Dubilier, Manuel Liebeke · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- In Need of a Quorum: From Microbes to Mood Via the Immune SystemJoana S. Cruz-Pereira, John F. Cryan · 2020 · American Journal of Psychiatry
- Gut Microbiome and Paediatric Inflammatory Bowel Disease: Emerging Mechanistic and Therapeutic Insights Into Pathogenesis and Microbiota‐Based ApproachesChu Wang, Dong Zhan · 2025 · IET Systems Biology
- Localized Drug Delivery Using Linezolid Hydrogel for Periodontal TherapyIria Seoane‐Viaño, Mariola Seoane-Gigirey, Carlos Bendicho‐Lavilla, Luz María Gigirey, Francisco Javier Otero-Espinar, Santiago Seoane · 2024 · Annals of Orthodontics and Periodontics Specialty
- Changes in gut microbiota and metabolites of mice with intravenous graphene oxide-induced embryo toxicityXiaojing Liu, Zengjin Wang, Chuanfeng Teng, Zhiping Wang · 2024 · Toxicological Research
- Die Mikroben in uns und der Wettlauf um die Struktur und Biosynthese von ColibactinHelge B. Bode · 2015 · Angewandte Chemie
- SIGNing a symbiotic treaty with gut microbiotaGeanncarlo Lugo‐Villarino, Olivier Neyrolles · 2015 · The EMBO Journal
- Metabiotics: prospects, challenges and opportunitiesShenderov Ba, Tkachenko Ei, Mikhail M. Zakharchenko, Alexander V. Sinitsa · 2019 · Medical alphabet
- Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile AcidsRobert A. Quinn, Alison F. Vrbanac, Alexey V. Melnik, Kathryn A. Patras, Mitchell P. Christy, Andrew T. Nelson, Alexander A. Aksenov, Anupriya Tripathi, Greg C. Humphrey, Ricardo Silva et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Sputum Microbiota Compositions Correlate With Metabolome and Clinical Outcomes of COPD‐Bronchiectasis Association: A Prospective Cohort StudyZhen‐feng He, Xiaoxian Zhang, Cui‐xia Pan, Xin‐zhu Yi, Yan Huang, Chun‐lan Chen, Shanshan Zha, Lai‐jian Cen, Han‐qin Cai, Lei Yang et al. · 2025 · Exploration
- Observation of intestinal flora diversity with the parasites infection process in a nonlethal malaria model of BALB/c mice induced by Plasmodium yoelii 17XNL strainWei Guan, Daoxiu Xu, Shuguo Yang, Yanqing Zhao, Yiting Xie, Min Lin, Yaqun Liu, Yuzhong Zheng, Jian Li · 2023 · Decoding Infection and Transmission
- Methods and Techniques Used for Obtaining and Identifying of Microbial Low Molecular Weight Cellular Compounds, Metabolites and Signaling MoleculesShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- Introducing MetabolomicsSumira Jan, Parvaiz Ahmad · 2019 · Elsevier eBooks
- Prebiotic Microcapsule-Encapsulated Pterostilbene Alleviates Ulcerative Colitis by Regulating the Intestinal Microenvironment and Activating AHR/IL-22 PathwayHuanyu Li, Ziwei Yang, Chuanyu Zhang, Xueyong Wei, Wenjing Wang, Ting Bai, Zhichao Deng, Bowen Gao, Manli Cui, Weixuan Jing et al. · 2025 · Engineering
- Network-Based Multiomic Nutrient-Associated Predictive Models for Inflammatory Bowel DiseaseMartine Saint-Cyr, Evaniya Shakya, Janet Siebert, Emily B. Hill, Nancy F. Krebs, Edwin F. de Zoeten, Sarah Jean Borengasser · 2025 · Current Developments in Nutrition
- Glyoxylate supplementation ameliorates colitis associated colon cancer progressionNabendu Murmu, P. Ghosh, Akhileshwar Namani, Tapas Patra · 2024 · Journal of Cellular Physiology
- The Composition and Functions of Human Gut Symbiotic MicrobiotaShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- PsychobioticsSabrina Mörkl, Mary Butler, Franziska Cichini, John F. Cryan, Timothy G. Dinan · 2020 · Oxford University Press eBooks
- Germ-free Mice Technology: Opportunity for Future ResearchAshish Jain, Anand Maurya · 2022 · Nutritional neurosciences
- Differential Modulation of Mouse Intestinal Organoids with Fecal Luminal Factors from Obese, Allergic, Asthmatic ChildrenSamir Córdova, Mireia Tena‐Garitaonaindia, Ana I. Álvarez‐Mercado, Reyes Gámez‐Belmonte, María Amelia Gómez Llorente, Fermín Sánchez de Medina, Ana Martínez‐Cañavate, Olga Martínez‐Augustin, Carolina Gómez‐Llorente · 2024 · International Journal of Molecular Sciences
- The metabolic role of the microbiotaWiley Barton, Fergus Shanahan, Paul D. Cotter, Órla O’Sullivan · 2015 · Clinical Liver Disease
- Messengers from the microbiotaFyza Y. Shaikh, Cynthia L. Sears · 2020 · Science
- Human Endogenous Natural ProductsYingjie Bai, Liyun Zhang, Xiaoguang Lei · 2021 · Fortschritte der Chemie Organischer Naturstoffe/Fortschritte der Chemie organischer Naturstoffe/Progress in the chemistry of organic natural products
- Microbiota, Liver Diseases, and AlcoholAnne‐Marie Cassard, Philippe Gérard, Gabriel Perlemuter · 2018 · ASM Press eBooks
- Regulation of Host Chromatin by Bacterial MetabolitesSridhar Mani · 2016 · Elsevier eBooks
- The Community Ecology of Microbial MoleculesRobert A. Quinn, Theodore Alexandrov · 2014 · Journal of Chemical Ecology
- The therapeutic prospect of crosstalk between prokaryotic and eukaryotic organisms in the human gutMurad A. Mubaraki, Mohammad Ahmad, Taghreed A. Hafiz, Mohammed Ali M. Marie · 2018 · FEMS Microbiology Ecology
- Patent ductus arterious and increased conjugated bilirubin in the second week after birth are independent risk factors for necrotizing enterocolitis in preterm infants: an observational studyXiaoya Han, Shudong Cui · 2023 · BMC Pediatrics
- Alteration of gut microbiota in Henoch-Schönlein purpura children with gastrointestinal involvementYe Li, Jiang Xue, Zhaohua Zhang, Wei Wang, Yulong Wang, Weiquan Zhang · 2024 · Irish Journal of Medical Science (1971 -)
- Comparative Analysis of Microbiological Profiles and Antibiotic Resistance Genes in Subjects with Colorectal Cancer and Healthy IndividualsJun Li, Yanyun Zhu, Qing Chang, Yuan Gong, Jun Wan, Shiping Xu · 2025 · Polish Journal of Microbiology
- The microbiome as a target for endocrine disruptors: Novel chemicals may disrupt androgen and microbiome-mediated autoimmunityMichael E. Baker · 2014 · Endocrine Disruptors
- Metabolic Relationship Between the Host and Its Gut MicrobiotaShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- Microbiomes and HolobiontsDerek Skillings, Katarzyna B. Hooks · 2018 · Elsevier eBooks
- Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACsSachiko Haga‐Yamanaka, Rogelio Nuñez‐Flores, Christi Ann Scott, Sarah Perry, Stephanie Turner Chen, Crystal G. Pontrello, Meera Goh Nair, Anandasankar Ray · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Exercise and the Brain–Gut AxisDouglas Buchmann Godinho, Michele Rechia Fighera, Luiz Fernando Freire Royes · 2024 · Elsevier eBooks
- Metabolomics Approaches for Microbiome AnalysisSusanta Sinha Roy, Smrita Singh · 2025 · Springer eBooks
- Bupropion administration significantly impacts the gut microbiome, serum metabolites, and immune factors in chronic stress depression ratsJialin Li, Weijie Zhang, Xuena Li, Zongbao Liu, Yan He · 2025 · Journal of Affective Disorders
- What is the impact of the virome and mycobiome on female reproductive tract health? A systematic scoping reviewYing Liu, Xingya Liao, Qimeng Chen, Hongyan Wang, Hualei Dai · 2026 · Frontiers in Immunology
- Short-chain fatty acid–producing probiotics: an effective approach for modulating gut dysbiosis and mitigating inflammatory responsesMehran Mahooti, Fatemeh Safaei, Elahe Abdolalipour, Ghazale Ahmadbeigi, Hadiseh Shokouhi, Tina Fallah, Davood Zare · 2026 · Microbial Pathogenesis
- A smart nutrition system for vitamin B 12 deficiency management from sensing to precision interventionYiting Tang, Xiaodong Zheng, Fujie Yan · 2026 · Critical Reviews in Food Science and Nutrition
- Remodelling of the gut virome after long-term fastingNatalie Falshaw, Quinten R. Ducarmon, Alexandra King, Franziska Grundler, Robin Mesnage · 2026 · npj Biofilms and Microbiomes
- Influence of Gut Microbiota on Hepatic Lipogenesis and Disease PathogenesisVishal Singh, Beng San Yeoh, James Mukasa Ntambi, Matam Vijay–Kumar · 2015 · Springer eBooks
- Molecular Language of Symbiotic Gut MicroorganismsShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- Microbiome studies and twin researchJoohon Sung, Hang A Park, Soo Ji Lee · 2022 · Elsevier eBooks
- The therapeutic role of microbial metabolites in human health and diseasesNivedita Manoharan, Rajeshwari Parasuraman, Dheepthi Jayamurali, Sathya Narayanan Govindarajulu · 2023 · Elsevier eBooks
- You Need Guts to Make New NeuronsSusanne A. Wolf, Daniele Mattei · 2017 · Current Behavioral Neuroscience Reports
- More Than a Gut Feeling: Emerging Roles of the Microbiome in the Pathophysiology and Treatment of DepressionJane Allyson Foster · 2019 · Elsevier eBooks
- СОСТОЯНИЕ КИШЕЧНОЙ МИКРОФЛОРЫ ПРИ ТУБЕРКУЛЕЗЕ, "Вестник Центрального научно-исследовательского института туберкулеза"О. Г. Комиссарова, Виолетта Андреевна Шорохова, Р. Ю. Абдуллаев · 2021 · Вестник ЦНИИТ
- ConclusionShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- Gut Dysbacteriosis Is Associated with an Imbalanced Cytokines Network in Women with Unexplained MiscarriageYongjie Liu, Hainan Chen, Dan Chen, Liping Feng, Jun Zhang · 2020
- Gut microbiota of the rice and corn strains of Spodoptera frugiperda: diversity and functionNathalia Cavichiolli de Oliveira · 2021 · Digital Library of Theses and Dissertations (Universidade de São Paulo)
- Microbiome-metabolome interactions predict host phenotypeOshrit Shtossel, Omry Koren, Iris Shai, Ehud Rinott, Yoram Louzoun · 2022 · Research Square
- Editorial: Targeting the microbiota to attenuate chronic inflammationElena Moreno, Marius Trøseid, Ivan Vujkovic-Cvijin, Giulia Carla Marchetti, Laura Martín‐Pedraza, Sergio Serrano Villar · 2023 · Frontiers in Immunology
- Nonalcoholic Components of Wine and Atherosclerotic Cardiovascular DiseaseA O’Connor, GEORGES M. HALPERN, Rosemary L. Walzem · 2016 · Springer eBooks
- Effects of dietary fermentable material on innate and adaptive immune measures in male and female rats under resting and immunized conditionsPadmaja Shastri · 2015 · e-scholar@UOIT (University of Ontario Institute of Technology)
- Mapping interactions of microbial metabolites and human receptorsDominic A. Colosimo, Jeffrey A. Kohn, Peter M. Luo, Sun Murray Han, Amanda J. Pickard, Arka Rao, Justin R. Cross, Louis J. Cohen, Sean F. Brady · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Chemistry and Enzymology Encoded by the Human MicrobiomeEmilee E. Shine, Phu-Khat Nwe, Jason M. Crawford · 2019 · Elsevier eBooks
- Aşılar ve MikrobiyotaMelda Çelik, Sıddıka Songül Yalçın · 2019 · Turkish Journal of Pediatric Disease
- Biophysics applications in drug discovery: Working toward a new integrative modelJuan Bueno · 2020 · Elsevier eBooks
- Thermodynamics of secondary metabolism: The triumph of living systemsJuan Bueno · 2020 · Elsevier eBooks
- Prospects in the Field of Intended-Use Metabiotics CreationShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- The Digestive Function of Human Gut MicrobiotaShenderov Ba, Alexander V. Sinitsa, Mikhail M. Zakharchenko, Christine Lang · 2020 · Springer eBooks
- Molecular Approaches for Analyzing Organismal and Environmental InteractionsStephanie Fern Hudon · 2020
- The brain-gut-microbiota axisJ. Neu · 2021 · Elsevier eBooks
- References2021 · Elsevier eBooks
- Gut Dysbacteriosis Is Associated with an Imbalanced Cytokines Network in Women with Unexplained MiscarriageYongjie Liu, Hainan Chen, Dan Chen, Liping Feng, Jun Zhang · 2020
- Gut Microbiota in Inflammatory Bowel Disease: Still More Questions Than AnswersTarkan Karakan · 2022 · Journal of Enterocolitis
- Ecological Dynamics Imposes Fundamental Challenges in Microbial Source TrackingXu‐Wen Wang, Lu Han Wu, Lei Dai, Xiaole Yin, Tong Zhang, Scott T. Weiss, Yang‐Yu Liu · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Reviewer #1 (Public Review): Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACs2023 · eLife
- eLife Assessment: Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACsMani Ramaswami · 2023 · eLife
- Reviewer #2 (Public Review): Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACs2023 · eLife
- Plasticity of gene expression in the nervous system by exposure to environmental odorants that inhibit HDACsSachiko Haga‐Yamanaka, Rogelio Nuñez‐Flores, Christi Ann Scott, Sarah Perry, Stephanie Turner Chen, Crystal G. Pontrello, Meera Goh Nair, Anandasankar Ray · 2023 · eLife
- EFFECT OF INFLAMMATORY FACTORS IN THE PATHOGENESIS OF CHRONIC RHINOSINUSITISAndrzej Wojdas · 2023 · The Polish Journal of Aviation Medicine Bioengineering and Psychology
- Gut Microbiome: Perspectives and Challenges in Human HealthNeha Salaria, Neeraj, Junaid Furhan, Rajesh Kumar · 2023 · Springer eBooks