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The Environmental Sensor AHR Protects from Inflammatory Damage by Maintaining Intestinal Stem Cell Homeostasis and Barrier Integrity
Open accessAbstract
The epithelium and immune compartment in the intestine are constantly exposed to a fluctuating external environment. Defective communication between these compartments at this barrier surface underlies susceptibility to infections and chronic inflammation. Environmental factors play a significant, but mechanistically poorly understood, role in intestinal homeostasis. We found that regeneration of intestinal epithelial cells (IECs) upon injury through infection or chemical insults was profoundly influenced by the environmental sensor aryl hydrocarbon receptor (AHR). IEC-specific deletion of Ahr resulted in failure to control C. rodentium infection due to unrestricted intestinal stem cell (ISC) proliferation and impaired differentiation, culminating in malignant transformation. AHR activation by dietary ligands restored barrier homeostasis, protected the stem cell niche, and prevented tumorigenesis via transcriptional regulation of of Rnf43 and Znrf3, E3 ubiquitin ligases that inhibit Wnt-β-catenin signaling and restrict ISC proliferation. Thus, activation of the AHR pathway in IECs guards the stem cell niche to maintain intestinal barrier integrity.
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“Dietary supplementation with indole-3-carbinol activates the AHR in intestinal epithelial cells to restore intestinal barrier integrity in mice infected with Citrobacter rodentium.”
From Microbiota–gut–brain axis and its therapeutic applications in neurodegenerative diseases (2024) · cites this paper as [653]
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Kiss, E. A., Vonarbourg, C., Kopfmann, S., Hobeika, E., Finke, D., Esser, C., & Diefenbach, A. (2011) · Science · doi:10.1126/science.1214914 · Cited by 801 · cited 2×
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BackgroundFeedback control of AHR signalling regulates intestinal immunity
Schiering, C., Wincent, E., Metidji, A., Iseppon, A., Li, Y., Potocnik, A. J., Omenetti, S., Henderson, C. J., Wolf, C. R., Nebert, D. W., et al. (2017) · Nature · doi:10.1038/nature21080 · Cited by 543 · cited 4×
“Our previous research established an important role of the AHR pathway in IECs as ‘‘gatekeeper’’ for the supply of ligands to intestinal immune cells (Schiering et al., 2017).”
BackgroundInfluentialSelf-citationNutrition, inflammation and cancer
Zitvogel, L., Pietrocola, F., & Kroemer, G. (2017) · Nature Immunology · doi:10.1038/ni.3754 · Cited by 446 · cited 1×
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West, N. R., McCuaig, S., Franchini, F., & Powrie, F. M. (2015) · Nature reviews. Immunology · doi:10.1038/nri3896 · Cited by 410 · cited 1×
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“IL-22 that has also been linked to colon cancer in mice and humans (Jiang et al., 2013; Kryczek et al., 2014) is elevated in VillinCreAhrfl/fl mice, probably due to increased levels of AHR ligands accessible to mucosal immune cells, as Ahr-deficient IECs do not express CYP1A1.”
BackgroundAhR sensing of bacterial pigments regulates antibacterial defence
Moura‐Alves, P., Fae, K. C., Houthuys, E., Dorhoi, A., Kreuchwig, A., Furkert, J., Barison, N., Diehl, A., Munder, A., Constant, P., et al. (2014) · Nature · doi:10.1038/nature13684 · Cited by 380 · cited 2×
“Although the AHR was originally described as a receptor for dioxin and other xenobiotics, it is now clear that physiological AHR ligands such as dietary components and tryptophan metabolites (Denison and Nagy, 2003; Hubbard et al., 2015; Lamas et al., 2016;McMillan and Bradfield, 2007; Moura-Alves et al., 2014; Zelant…”
BackgroundAdaptation of the human aryl hydrocarbon receptor to sense microbiota-derived indoles
Hubbard, T. D., Murray, I. A., Bisson, W. H., Lahoti, T. S., Gowda, K., Amin, S. G., Patterson, A. D., & Perdew, G. H. (2015) · Scientific Reports · doi:10.1038/srep12689 · Cited by 377 · cited 2×
“Although the AHR was originally described as a receptor for dioxin and other xenobiotics, it is now clear that physiological AHR ligands such as dietary components and tryptophan metabolites (Denison and Nagy, 2003; Hubbard et al., 2015; Lamas et al., 2016;McMillan and Bradfield, 2007; Moura-Alves et al., 2014; Zelant…”
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“Aberrant Wnt-b-catenin activation is a hallmark of colorectal cancers, highlighting the importance of this pathway in intestinal homeostasis (Novellasdemunt et al., 2015).”
BackgroundSelf-citationIndole-3-carbinol as a chemopreventive and anti-cancer agent
Weng, J., Tsai, C.-H., Kulp, S. K., & Chen, C. (2008) · Cancer Letters · doi:10.1016/j.canlet.2008.01.033 · Cited by 328 · cited 1×
“There are numerous reports on I3C as a cancer-preventive agent (Dı́az-Dı́az et al., 2016; Kim and Milner, 2005; Weng et al., 2008).”
BackgroundA constitutively active dioxin/aryl hydrocarbon receptor induces stomach tumors
Andersson, P., McGuire, J., Rubio, C., Gradin, K., Whitelaw, M. L., Pettersson, S., Hanberg, A., & Poellinger, L. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.152706299 · Cited by 310 · cited 1×
“An important aspect of AHR activation is the necessity for negative feedback regulation as prolonged stimulation has detrimental effects (Andersson et al., 2002; Mitchell and Elferink, 2009).”
BackgroundKawajiri, K., Kobayashi, Y., Ohtake, F., Ikuta, T., Matsushima, Y., Mimura, J., Pettersson, S., Pollenz, R. S., Sakaki, T., Hirokawa, T., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0902132106 · Cited by 270 · cited 1×
“In agreement with published data on increased levels of b-catenin in Ahr / mice (Kawajiri et al., 2009), both strains of mice with dysregulated AHR in IECs had substantially”
ResultDiet, nutrition, and cancer: past, present and future
Mayne, S. T., Playdon, M. C., & Rock, C. L. (2016) · Nature Reviews Clinical Oncology · doi:10.1038/nrclinonc.2016.24 · Cited by 264 · cited 1×
“Dietary AHR Ligands Prevent Tumorigenesis and Restore Regulation of Wnt-b-Catenin Pathway The notion that a diet enriched in green vegetables reduces the risk of cancer formation is widely distributed, although scientific evidence from several clinical trials remains inconsistent (Mayne et al., 2016; Potter and Steinm…”
BackgroundTargets for indole-3-carbinol in cancer prevention
Kim, Y. S., & Milner, J. A. (2005) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2004.10.007 · Cited by 236 · cited 1×
“There are numerous reports on I3C as a cancer-preventive agent (Dı́az-Dı́az et al., 2016; Kim and Milner, 2005; Weng et al., 2008).”
BackgroundWalisser, J. A., Glover, E., Pande, K., Liss, A. L., & Bradfield, C. A. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504757102 · Cited by 234 · cited 1×
“rodentium, such as FVB and AKR, express the low-affinity Ahr allele as do mice with a floxed Ahr locus (Walisser et al., 2005) and these are substantially more affected by C.”
BackgroundVegetables, fruit and phytoestrogens as preventive agents.
Potter, J. D., & Steinmetz, K. A. (1996) · PubMed · Cited by 220
IL-22 is related to development of human colon cancer by activation of STAT3
Jiang, R., Wang, H., Deng, L., Hou, J., Shi, R., Yao, M., Gao, Y., Yao, A., Wang, X., Yu, L., et al. (2013) · BMC Cancer · doi:10.1186/1471-2407-13-59 · Cited by 190 · cited 1×
“IL-22 that has also been linked to colon cancer in mice and humans (Jiang et al., 2013; Kryczek et al., 2014) is elevated in VillinAhr mice, probably due to increased levels of AHR ligands accessible to mucosal immune cells, as Ahr-deficient IECs do not express CYP1A1.”
BackgroundThe Aryl Hydrocarbon Receptor sans Xenobiotics: Endogenous Function in Genetic Model Systems
McMillan, B. J., & Bradfield, C. A. (2007) · Molecular Pharmacology · doi:10.1124/mol.107.037259 · Cited by 183 · cited 1×
“Although the AHR was originally described as a receptor for dioxin and other xenobiotics, it is now clear that physiological AHR ligands such as dietary components and tryptophan metabolites (Denison and Nagy, 2003; Hubbard et al., 2015; Lamas et al., 2016;McMillan and Bradfield, 2007; Moura-Alves et al., 2014; Zelant…”
BackgroundHost Susceptibility to the Attaching and Effacing Bacterial PathogenCitrobacter rodentium
Vallance, B. A., Deng, W., Jacobson, K., & Finlay, B. B. (2003) · Infection and Immunity · doi:10.1128/iai.71.6.3443-3453.2003 · Cited by 180 · cited 1×
“rodentium is an attaching effacing pathogen that causes IEC apoptosis (Vallance et al., 2003) and necessitates replenishment of damaged IECs for maintenance of barrier integrity and repair processes.”
BackgroundA Role of the Aryl Hydrocarbon Receptor in Attenuation of Colitis
Furumatsu, K., Nishiumi, S., Kawano, Y., Ooi, M., Yoshie, T., Shiomi, Y., Kutsumi, H., Ashida, H., Fujii‐Kuriyama, Y., Azuma, T., et al. (2011) · Digestive Diseases and Sciences · doi:10.1007/s10620-011-1643-9 · Cited by 166 · cited 12×
“In order to accelerate the process of tumorigenesis, we applied the widely used AOM/DSS (dextran sulfate sodium) model in which one dose of AOM was followed by two cycles of DSS.”
BackgroundInfluentialPorcupine inhibitor suppresses paracrine Wnt-driven growth of Rnf43;Znrf3 -mutant neoplasia
Koo, B., van Es, J. H., van den Born, M., & Clevers, H. C. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1508113112 · Cited by 157
Automated brightfield morphometry of 3D organoid populations by OrganoSeg
Borten, M. A., Bajikar, S. S., Sasaki, N., Clevers, H. C., & Janes, K. A. (2018) · Scientific Reports · doi:10.1038/s41598-017-18815-8 · Cited by 150 · cited 1×
“The percentage of viable organoids was determined using OrganoSeg software (Borten et al., 2018).”
MethodTiming is everything: Consequences of transient and sustained AhR activity
Mitchell, K. A., & Elferink, C. J. (2008) · Biochemical Pharmacology · doi:10.1016/j.bcp.2008.10.028 · Cited by 120 · cited 1×
“An important aspect of AHR activation is the necessity for negative feedback regulation as prolonged stimulation has detrimental effects (Andersson et al., 2002; Mitchell and Elferink, 2009).”
BackgroundMolecular Role of RNF43 in Canonical and Noncanonical Wnt Signaling
Tsukiyama, T., Fukui, A., Terai, S., Fujioka, Y., Shinada, K., Takahashi, H., Yamaguchi, T. P., Ohba, Y., & Hatakeyama, S. (2015) · Molecular and Cellular Biology · doi:10.1128/mcb.00159-15 · Cited by 105 · cited 1×
“We focused on the tumor suppressors RNF43 and ZNRF3, which are transmembrane E3 ubiquitin ligases expressed in LGR5 stem cells that regulate WNT signals by targeting WNT receptors for degradation in an R-spondin-sensitive manner (Hao et al., 2012; Koo et al., 2012; Tsukiyama et al., 2015).”
BackgroundDíaz-Díaz, C. J., Ronnekleiv‐Kelly, S. M., Nukaya, M., Geiger, P. G., Balbo, S., Dator, R., Megna, B. W., Carney, P. R., Bradfield, C. A., & Kennedy, G. D. (2016) · Annals of Surgery · doi:10.1097/sla.0000000000001874 · Cited by 99 · cited 3×
“The progression from inflammation to tumorigenesis is well established (Sch€ afer and Werner, 2008) and our mice readily developed mixed colon adenomas/adenocarcinomas in the standard AOM/DSS model in line with previous data in global Ahr / mice (Dı́az-Dı́az et al., 2016) or even with the mutagen AOM alone.”
BackgroundResultR-Spondin 2 signalling mediates susceptibility to fatal infectious diarrhoea
Papapietro, O., Teatero, S., Thanabalasuriar, A., Yuki, K. E., Diez, E., Zhu, L., Kang, E., Dhillon, S., Muise, A. M., Durocher, Y., et al. (2013) · Nature Communications · doi:10.1038/ncomms2816 · Cited by 79 · cited 2×
“rodentium infection varies between different strains of mice and susceptible strains are characterized by aberrant R-spondin 2 (RSPO2)-mediated Wnt-b-catenin activation which causes excessive ISC proliferation and poor differentiation into epithelial subtypes (Papapietro et al., 2013).”
BackgroundLuecke-Johansson, S., Gralla, M., Rundqvist, H., Ho, J. C., Johnson, R. S., Gradin, K., & Poellinger, L. (2017) · Molecular and Cellular Biology · doi:10.1128/mcb.00630-16 · Cited by 68 · cited 1×
“In vitro studies on cell lines proposed that AHR functions as part of an E3 ubiquitin ligase complex that serves to ubiquinate b-catenin and target it for degradation (Luecke-Johansson et al., 2017; Ohtake et al., 2007).”
BackgroundKleman, M. I., Poellinger, L., & Gustafsson, J.-Α. (1994) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)37666-4 · Cited by 40 · cited 1×
“Some of the strongest endogenous AHR ligands are derived from phytochemicals such as indole-3-carbinol (I3C) that is converted to the high-affinity AHR ligand ICZ by exposure to stomach acid (Bjeldanes et al., 1991; Kleman et al., 1994).”
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Metadata
- Authors
- Metidji, A., Omenetti, S., Crotta, S., Li, Y., Nye, E., Ross, E., Li, V., Maradana, M. R., Schiering, C., & Stockinger, B.
- Affiliations
- The Francis Crick Institute (GB)
- University of London (GB)
- Corresponding author
- Schiering, Chris
- Stockinger, Brigitta
- ORCID
- Venue
- Immunity
- Publisher
- Elsevier BV
- Published
- 2018-08
- Volume
- 49
- Issue
- 2
- Pages
- 353-362.e5
- ISSN
- 1074-7613 (ISSN-L)
- PMC
- PMC6104739
- OpenAlex
- W2887221348
- Cited by
- 402
- References
- 45
- Citations by year
- 2026: 37 · 2025: 50 · 2024: 56 · 2023: 63 · 2022: 55 · 2021: 60 · 2020: 50 · 2019: 30
- FWCI
- 12.45
- Type
- journal article
- Language
- en
- Update notices
- erratum (2019-06-18)
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Immunity (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Figshare (submittedVersion, cc-by)
- Funders
- Cancer Research UK (FC001105, FC001159, 103156/B/13/Z, 19691)
- Fondation Acteria
- Medical Research Council
- Wellcome Trust (100910/Z/13/Z)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Wnt/β-catenin signaling in development and cancer
- Health Sciences › Medicine › Gastroenterology › Inflammatory Bowel Disease
- Life Sciences › Immunology and Microbiology › Immunology › IL-33, ST2, and ILC Pathways
- Keywords
- aryl hydrocarbon receptor, intestinal stem cells, intestinal barrier integrity, intestinal homeostasis, intestinal inflammation, RNF43, ZNRF3, Wnt/β-catenin signaling, E3 ubiquitin ligase, stem cell niche, intestinal tumorigenesis
- MeSH terms
- Animals, Cell Differentiation, Cell Line, Enterobacteriaceae Infections, Epithelial Cells, Humans, Intestinal Mucosa, Mice, Inbred C57BL, Stem Cells, Receptors, Aryl Hydrocarbon, Mice, Knockout, Tight Junctions, Citrobacter rodentium, Ubiquitin-Protein Ligases, Cell Proliferation, Mice, Basic Helix-Loop-Helix Proteins, Basic Helix-Loop-Helix Transcription Factors, HEK293 Cells, Wnt Signaling Pathway, Carcinogenesis
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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