The DOI matches its Crossref record; 46 of the 47 references it cites were found in a registry or an index.
BrainMRNet: Brain tumor detection using magnetic resonance images with a novel convolutional neural network model
Open accessAbstract
A brain tumor is a mass that grows unevenly in the brain and directly affects human life. This mass occurs spontaneously because of the tissues surrounding the brain or the skull. Surgical methods are generally preferred for the treatment of the brain tumor. Recently, models of deep learning in the diagnosis and treatment of diseases in the biomedical field have gained intense interest. In this study, we propose a new convolutional neural network model named BrainMRNet. This architecture is built on attention modules and hypercolumn technique; it has a residual network. Firstly, image is preprocessed in BrainMRNet. Then, this step is transferred to attention modules using image augmentation techniques for each image. Attention modules select important areas of the image and the image is transferred to convolutional layers. One of the most important techniques that the BrainMRNet model uses in the convolutional layers is hypercolumn. With the help of this technique, the features extracted from each layer of the BrainMRNet model are retained by the array structure in the last layer. The aim is to select the best and the most efficient features among the features maintained in the array. Accessible magnetic resonance images were used to detect brain tumor with the BrainMRNet model. BrainMRNet model is more successful than the pre-trained convolutional neural network models (AlexNet, GoogleNet, VGG-16) used in this study. The classification success achieved with the BrainMRNet model was 96.05%.
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“The total number of images was 253, and patients provided each image voluntarily, making the dataset heterogeneous.”
From A Comprehensive Analysis of Recent Deep and Federated-Learning-Based Methodologies for Brain Tumor Diagnosis (2022) · cites this paper as [59]
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“The images were not of a uniform resolution, and the image quality was not high, reducing the efficiency of the proposed method.”
From A Comprehensive Analysis of Recent Deep and Federated-Learning-Based Methodologies for Brain Tumor Diagnosis (2022) · cites this paper as [59]
Citations
Cites
CBAM: Convolutional Block Attention Module
Woo, S., Park, J., Lee, J.-Y., & Kweon, I. S. (2018) · Lecture Notes in Computer Science · doi:10.1007/978-3-030-01234-2_1 · Cited by 25,853
SGDR: Stochastic Gradient Descent with Warm Restarts
Loshchilov, I., & Hutter, F. (2016) · arXiv · doi:10.48550/arxiv.1608.03983 · Cited by 5,309
Hypercolumns for object segmentation and fine-grained localization
Hariharan, B., Arbelaez, P., Girshick, R., & Malik, J. (2015) · 2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR) · doi:10.1109/cvpr.2015.7298642 · Cited by 1,511
Multi-grade brain tumor classification using deep CNN with extensive data augmentation
Sajjad, M., Khan, S., Muhammad, K., Wu, W., Ullah, A., & Baik, S. W. (2018) · Journal of Computational Science · doi:10.1016/j.jocs.2018.12.003 · Cited by 895
Adaptive batch normalization for practical domain adaptation
Li, Y., Wang, N., Shi, J., Hou, X., & Liu, J. (2018) · Pattern Recognition · doi:10.1016/j.patcog.2018.03.005 · Cited by 601
Shree, N. V., & Kumar, T. N. R. (2018) · Brain Informatics · doi:10.1007/s40708-017-0075-5 · Cited by 490
A comparison of deep networks with ReLU activation function and linear spline-type methods
Eckle, K., & Schmidt-Hieber, J. (2018) · Neural Networks · doi:10.1016/j.neunet.2018.11.005 · Cited by 414
Residual Networks of Residual Networks: Multilevel Residual Networks
Zhang, K., Sun, M., Han, T. X., Yuan, X., Guo, L., & Liu, T. (2017) · IEEE Transactions on Circuits and Systems for Video Technology · doi:10.1109/tcsvt.2017.2654543 · Cited by 413
Toğaçar, M., Ergen, B., Cömert, Z., & Özyurt, F. (2019) · IRBM · doi:10.1016/j.irbm.2019.10.006 · Cited by 298
Toğaçar, M., Özkurt, K. B., Ergen, B., & Cömert, Z. (2019) · Physica A Statistical Mechanics and its Applications · doi:10.1016/j.physa.2019.123592 · Cited by 276
Deep Learning–Assisted Diagnosis of Cerebral Aneurysms Using the HeadXNet Model
Park, A., Chute, C., Rajpurkar, P., Lou, J., Ball, R. L., Shpanskaya, K., Jabarkheel, R., Kim, L. H., McKenna, E., Tseng, J., et al. (2019) · JAMA Network Open · doi:10.1001/jamanetworkopen.2019.5600 · Cited by 258
On the Properties of the Softmax Function with Application in Game Theory and Reinforcement Learning
Gao, B., & Pavel, L. (2017) · arXiv · doi:10.48550/arxiv.1704.00805 · Cited by 207
Toğaçar, M., Ergen, B., & Cömert, Z. (2019) · Journal of Applied Biomedicine · doi:10.1016/j.bbe.2019.11.004 · Cited by 207
De, D. K., Mukherjee, S., Anand, P. S. S., Kumar, P., Suresh, V. R., & Vijayan, K. K. (2019) · Scientific Reports · doi:10.1038/s41598-019-55845-w · Cited by 196
Budak, Ü., Cömert, Z., Rashid, Z. N., Şengür, A., & Çıbuk, M. (2019) · Applied Soft Computing · doi:10.1016/j.asoc.2019.105765 · Cited by 169
Predictive Modeling of Brain Tumor: A Deep Learning Approach
Saxena, P., Maheshwari, A., & Maheshwari, S. (2020) · Advances in intelligent systems and computing · doi:10.1007/978-981-15-6067-5_30 · Cited by 156
Brain wave classification using long short-term memory network based OPTICAL predictor
Kumar, S., Sharma, A. K., & Tsunoda, T. (2019) · Scientific Reports · doi:10.1038/s41598-019-45605-1 · Cited by 129
Object Instance Segmentation and Fine-Grained Localization Using Hypercolumns
Hariharan, B., Arbelaez, P., Girshick, R., & Malik, J. (2017) · IEEE Transactions on Pattern Analysis and Machine Intelligence · doi:10.1109/tpami.2016.2578328 · Cited by 102
Toğaçar, M., Ergen, B., & Cömert, Z. (2019) · Medical Hypotheses · doi:10.1016/j.mehy.2019.109503 · Cited by 95
A simple and intelligent approach for brain MRI classification
Nazir, M., Wahid, F., & Khan, S. A. (2015) · Journal of Intelligent & Fuzzy Systems · doi:10.3233/ifs-141396 · Cited by 82
Shao, F., Wang, X., Meng, F., Zhu, J., Wang, D., & Dai, J. (2019) · Sensors · doi:10.3390/s19102288 · Cited by 71
Cömert, Z., Şengür, A., Budak, Ü., & Kocamaz, A. F. (2019) · Health Information Science and Systems · doi:10.1007/s13755-019-0079-z · Cited by 71
Budak, Ü., Cömert, Z., Çıbuk, M., & Şengür, A. (2019) · Medical Hypotheses · doi:10.1016/j.mehy.2019.109426 · Cited by 70
MRI Brain Images Classification: A Multi-Level Threshold Based Region Optimization Technique
Kanmani, P., & Marikkannu, P. (2018) · Journal of Medical Systems · doi:10.1007/s10916-018-0915-8 · Cited by 59
Geometry Aware Constrained Optimization Techniques for Deep Learning
Roy, S. K., Mhammedi, Z., & Harandi, M. T. (2018) · IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings · doi:10.1109/cvpr.2018.00469 · Cited by 57
Sertkaya, M. E., Ergen, B., & Toğaçar, M. (2019) · International Conference Electronics · doi:10.1109/electronics.2019.8765579 · Cited by 57
Brain tumors: Special characters for research and banking
Kheirollahi, M., Dashti, S., Khalaj, Z., Nazemroaia, F., & Mahzouni, P. (2014) · Advanced Biomedical Research · doi:10.4103/2277-9175.148261 · Cited by 54
Subclass Separation of White Blood Cell Images Using Convolutional Neural Network Models
Toğaçar, M., Ergen, B., & Sertkaya, M. E. (2019) · Elektronika ir Elektrotechnika · doi:10.5755/j01.eie.25.5.24358 · Cited by 52
Chronic Tympanic Membrane Diagnosis based on Deep Convolutional Neural Network
Başaran, E., Cömert, Z., Şengür, A., Budak, Ü., Çelik, Y., & Toğaçar, M. (2019) · International Conference on Computer Science and Engineering (UBMK) · doi:10.1109/ubmk.2019.8907070 · Cited by 47
Mini-batch algorithms with online step size
Yang, Z., Wang, C., Zhang, Z., & Li, J. (2018) · Knowledge-Based Systems · doi:10.1016/j.knosys.2018.11.031 · Cited by 41
Ahmed, H. M., Youssef, B. A. B., Elkorany, A. S., Saleeb, A. A., & El‐Samie, F. E. A. (2017) · Applied Optics · doi:10.1364/ao.57.000b25 · Cited by 36
Grisold, W., & Grisold, A. (2014) · Neuro-Oncology Practice · doi:10.1093/nop/npt002 · Cited by 31
DEEP LEARNING APPROACH FOR CLASSIFICATION OF BREAST CANCER
Toğaçar, M., & Ergen, B. (2018) · International Artificial Intelligence and Data Processing Symposium (IDAP) · doi:10.1109/idap.2018.8620802 · Cited by 31
Lukoff, J., & Olmos, J. (2017) · The Permanente Journal · doi:10.7812/tpp/17-007 · Cited by 28
Sign Language Recognition Based on CBAM-ResNet
Chao, H. G., Fenhua, W., & Zhang, R. (2019) · International Conference on Artificial Intelligence and Advanced Manufacturing (AIAM) · doi:10.1145/3358331.3358379 · Cited by 18
Change Detection in Synthetic Aperture Radar Images based on Convolutional Block Attention Module
Wang, D., Gao, F., Dong, J., & Wang, S. (2019) · International Workshop on the Analysis of Multitemporal Remote Sensing Images (MultiTemp) · doi:10.1109/multi-temp.2019.8866962 · Cited by 14
Skin Lesion Segmentation using Deep Hypercolumn Descriptors
Ramachandram, D., & Taylor, G. W. (2017) · Journal of Computational Vision and Imaging Systems · doi:10.15353/vsnl.v3i1.173 · Cited by 11
Biyomedikal Görüntülerde Derin Öğrenme ile Mevcut Yöntemlerin Kıyaslanması
Toğaçar, M., & Ergen, B. (2019) · DergiPark (Istanbul University) · Cited by 11
Deep MLP neural network control of bioreactor
Salah, L. B., & Fourati, F. (2019) · International Renewable Energy Congress · doi:10.1109/irec.2019.8754572 · Cited by 9
ANALISIS PERFORMA ALGORITMA NAIVE BAYES PADA DETEKSI OTOMATIS CITRA MRI
Akbar, F., Rais, A. N., Sobari, I. A., Zuama, R. A., & Rudiarto, B. (2019) · JITK (Jurnal Ilmu Pengetahuan dan Teknologi Komputer) · doi:10.33480/jitk.v5i1.586 · Cited by 8
A Simple yet Effective Method to Prune Dense Layers of Neural Networks
Babaeizadeh, M., Smaragdis, P., & Campbell, R. H. (2017) · Cited by 7
Densely connected convolutional network block based autoencoder for panorama map compression
Wang, S., Wang, H., Xiang, S., & Yu, L. (2019) · Signal Processing Image Communication · doi:10.1016/j.image.2019.115678 · Cited by 7
Zatürre Hastalığının Derin Öğrenme Modeli ile Tespiti
Toğaçar, M., Ergen, B., & Sertkaya, M. E. (2019) · DSpace - FIRAT (Fırat University) · Cited by 6
Improving Residual Block for Semantic Image Segmentation
Liu, F., Liu, J., Fu, J., & Lu, H. (2018) · IEEE International Conference on Multimedia Big Data · doi:10.1109/bigmm.2018.8499452 · Cited by 5
Hypercolumn Sparsification for Low-Power Convolutional Neural Networks
Pilly, P. K., Stepp, N. D., Liapis, Y., Payton, D. W., & Srinivasa, N. (2019) · ACM Journal on Emerging Technologies in Computing Systems · doi:10.1145/3304104 · Cited by 5
Deep Anchored Convolutional Neural Networks
Huang, J., Dwivedi, K., & Roig, G. (2019) · IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW) · doi:10.1109/cvprw.2019.00089 · Cited by 4
Research works printed but not linked: 3
- Brain, 2019, Tumor facts, Cent Brain Tumor Regist United States
- Brain, 2019, Tumor registry of the United States, CBTRUS
- Cömert, 2016, A study based on gray level co-occurrence matrix and neural network community for determination of hypoxic fetuses, Int Artif Intell Data Process Symp, TR, 569
Cited by
Sorted by citations
Toğaçar, M., Ergen, B., & Cömert, Z. (2020) · Computers in Biology and Medicine · doi:10.1016/j.compbiomed.2020.103805 · Cited by 574
Nayak, S. R., Nayak, D. R., Sinha, U., Arora, V., & Pachori, R. B. (2020) · Biomedical Signal Processing and Control · doi:10.1016/j.bspc.2020.102365 · Cited by 401
Nour, M., Cömert, Z., & Polat, K. (2020) · Applied Soft Computing · doi:10.1016/j.asoc.2020.106580 · Cited by 316
Multi-Modal Brain Tumor Detection Using Deep Neural Network and Multiclass SVM
Maqsood, S., Damaševičius, R., & Maskeliūnas, R. (2022) · Medicina · doi:10.3390/medicina58081090 · Cited by 313
Khan, P., Kader, M. F., Islam, S. M. R., Rahman, A. B., Kamal, M. S., Toha, M. U., & Kwak, K. S. (2021) · IEEE Access · doi:10.1109/access.2021.3062484 · Cited by 314
Metadata
- Authors
- Toğaçar, M., Ergen, B., & Cömert, Z.
- Affiliations
- Fırat University (TR)
- Samsun University (TR)
- Corresponding author
- Toğaçar, Mesut
- Venue
- Medical Hypotheses
- Publisher
- Elsevier BV
- Published
- 2020-01
- Volume
- 134
- Pages
- 109531
- ISSN
- 0306-9877 (ISSN-L)
- OpenAlex
- W2995003683
- Cited by
- 310
- References
- 47
- Citations by year
- 2026: 12 · 2025: 54 · 2024: 71 · 2023: 76 · 2022: 49 · 2021: 33 · 2020: 14
- FWCI
- 10.69
- Type
- journal article
- Language
- en
- Open access
- green
- hdl.handle.net
- Licence
- Locations
- Medical Hypotheses (publishedVersion)
- PubMed (publishedVersion)
- DSpace - FIRAT (Fırat University) (submittedVersion, cc-by-nc-nd)
- Topics
- Physical Sciences › Computer Science › Computer Vision and Pattern Recognition › Brain Tumor Detection and Classification
- Physical Sciences › Computer Science › Artificial Intelligence › AI in cancer detection
- Health Sciences › Medicine › Oncology › Glioma Diagnosis and Treatment
- Keywords
- brain tumor detection, magnetic resonance imaging, convolutional neural networks, attention modules, hypercolumns, ResNet, image augmentation, medical image classification, feature selection
- MeSH terms
- Deep Learning, Algorithms, Brain Neoplasms, Diagnosis, Computer-Assisted, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Signal Processing, Computer-Assisted, Early Detection of Cancer, Neuroimaging, Datasets as Topic
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