Group analysis in functional neuroimaging: selecting subjects using similarity measures
Open accessAbstract
Standard group analyses of fMRI data rely on spatial and temporal averaging of individuals. This averaging operation is only sensible when the mean is a good representation of the group. This is not the case if subjects are not homogeneous, and it is therefore a major concern in fMRI studies to assess this group homogeneity. We present a method that provides relevant distances or similarity measures between temporal series of brain functional images belonging to different subjects. The method allows a multivariate comparison between data sets of several subjects in the time or in the space domain. These analyses assess the global intersubject variability before averaging subjects and drawing conclusions across subjects, at the population level. We adapt the RV coefficient to measure meaningful spatial or temporal similarities and use multidimensional scaling to give a visual representation of each subject's position with respect to other subjects in the group. We also provide a measure for detecting subjects that may be outliers. Results show that the method is a powerful tool to detect subjects with specific temporal or spatial patterns, and that, despite the apparent loss of information, restricting the analysis to a homogeneous subgroup of subjects does not reduce the statistical sensitivity of standard group fMRI analyses.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Small literatures have made attempts to parse fMRI data across individuals using various statistical methods, but none have been sufficiently accepted to fall into wide use.
“Although small literatures have made attempts to parse fMRI data across individuals using various statistical methods (e.g., [11]), none have been sufficiently accepted to fall into wide use.”
From Organizing Heterogeneous Samples Using Community Detection of GIMME-Derived Resting State Functional Networks (2014) · cites this paper as [11]
Cites
1 retracted
Burbaud, P., Camus, O., Guehl, D., Bioulac, B. H., Caillé, J., & Michèle Allard, A. (2000) · Neuroscience Letters · doi:10.1016/s0304-3940(00)01099-5 · Cited by 52 · see citing works
RetractedNon‐parametric multivariate analyses of changes in community structure
Clarke, K. R. (1993) · Australian Journal of Ecology · doi:10.1111/j.1442-9993.1993.tb00438.x · Cited by 14,196 · see citing works
Imaging Cognition II: An Empirical Review of 275 PET and fMRI Studies
Cabeza, R., & Nyberg, L. (2000) · Journal of Cognitive Neuroscience · doi:10.1162/08989290051137585 · Cited by 3,598 · see citing works
A method for making group inferences from functional MRI data using independent component analysis
Calhoun, V. D., Adali, T., Pearlson, G. D., & Pekar, J. J. (2001) · Human Brain Mapping · doi:10.1002/hbm.1048 · Cited by 2,994 · see citing works
Li, T.-H. (2013) · Chapman & Hall/CRC eBooks · doi:10.1201/b15154-8 · Cited by 2,750 · see citing works
Multidimensional Scaling: I. Theory and Method
Torgerson, W. S. (1952) · Psychometrika · doi:10.1007/bf02288916 · Cited by 2,167 · see citing works
The Variability of Human, BOLD Hemodynamic Responses
Aguirre, G. K., Zarahn, E., & D’Esposito, M. (1998) · NeuroImage · doi:10.1006/nimg.1998.0369 · Cited by 1,224 · see citing works
A General Statistical Analysis for fMRI Data
Worsley, K. J., Liao, C. H., Aston, J. A. D., Petre, V., Duncan, G. H., Morales, F., & Evans, A. C. (2002) · NeuroImage · doi:10.1006/nimg.2001.0933 · Cited by 1,170 · see citing works
Spatial Pattern Analysis of Functional Brain Images Using Partial Least Squares
McIntosh, A. R., Bookstein, F. L., Haxby, J. V., & Grady, C. L. (1996) · NeuroImage · doi:10.1006/nimg.1996.0016 · Cited by 1,095 · see citing works
A Unifying Tool for Linear Multivariate Statistical Methods: The RV‐Coefficient
Robert, P., & Escoufier, Y. (1976) · Journal of the Royal Statistical Society Series C (Applied Statistics) · doi:10.2307/2347233 · Cited by 1,021 · see citing works
The problem of functional localization in the human brain
Morgan, T. (2002) · Cited by 968 · see citing works
How Many Subjects Constitute a Study?
Friston, K. J., Holmes, A. P., & Worsley, K. J. (1999) · NeuroImage · doi:10.1006/nimg.1999.0439 · Cited by 814 · see citing works
Simon, O., Mangin, J., Cohen, L., Bihan, D. L., & Dehaene, S. (2002) · Neuron · doi:10.1016/s0896-6273(02)00575-5 · Cited by 768 · see citing works
Evidence for Abnormal Cortical Functional Connectivity During Working Memory in Schizophrenia
Meyer‐Lindenberg, A., Poline, J., Kohn, P. D., Holt, J. L., Egan, M. F., Weinberger, D. R., & Berman, K. F. (2001) · American Journal of Psychiatry · doi:10.1176/appi.ajp.158.11.1809 · Cited by 507 · see citing works
Empirical Analyses of BOLD fMRI Statistics
Aguirre, G. K., Zarahn, E., & D’Esposito, M. (1997) · NeuroImage · doi:10.1006/nimg.1997.0264 · Cited by 474 · see citing works
Generic brain activation mapping in functional magnetic resonance imaging: A nonparametric approach
Brammer, M. J., Bullmore, E. T., Simmons, A., Williams, S., Grasby, P. M., Howard, R. J., Woodruff, P. W. R., & Rabe‐Hesketh, S. (1997) · Magnetic Resonance Imaging · doi:10.1016/s0730-725x(97)00135-5 · Cited by 470 · see citing works
Friston, K. J., Josephs, O., Zarahn, E., Holmes, A. P., Rouquette, S., & Poline, J.-B. (2000) · NeuroImage · doi:10.1006/nimg.2000.0609 · Cited by 432 · see citing works
Research methods for multimode data analysis
Law, H. G. (1984) · Medical Entomology and Zoology · Cited by 422 · see citing works
Plane Answers to Complex Questions
Christensen, R. (2020) · Springer texts in statistics · doi:10.1007/978-3-030-32097-3 · Cited by 367 · see citing works
Variability in fMRI: An Examination of Intersession Differences
McGonigle, D. J., Howseman, A., Athwal, B. S., Friston, K. J., Frackowiak, R. S. J., & Holmes, A. P. (2000) · NeuroImage · doi:10.1006/nimg.2000.0562 · Cited by 351 · see citing works
Functional Topography: Multidimensional Scaling and Functional Connectivity in the Brain
Friston, K. J., Frith, C., Fletcher, P. C., Liddle, P. F., & Frackowiak, R. S. J. (1996) · Cerebral Cortex · doi:10.1093/cercor/6.2.156 · Cited by 276 · see citing works
Characterizing the Response of PET and fMRI Data Using Multivariate Linear Models
Worsley, K. J., Poline, J., Friston, K. J., & Evans, A. C. (1997) · NeuroImage · doi:10.1006/nimg.1997.0294 · Cited by 258 · see citing works
Strother, S. C., Anderson, J., Frutiger, S. A., Muley, S., Rottenberg, D. A., Kjems, U., & Hansen, L. K. (2000) · NeuroImage · doi:10.1016/s1053-8119(00)91523-4 · Cited by 217 · see citing works
Moeller, J. R., Strother, S. C., Sidtis, J. J., & Rottenberg, D. A. (1987) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1038/jcbfm.1987.118 · Cited by 214 · see citing works
Combining Brains: A Survey of Methods for Statistical Pooling of Information
Lazar, N. A., Luna, B., Sweeney, J. A., & Eddy, W. F. (2002) · NeuroImage · doi:10.1006/nimg.2002.1107 · Cited by 208 · see citing works
Statistical limitations in functional neuroimaging II. Signal detection and statistical inference
Petersson, K. M., Nichols, T. E., Poline, J.-B., & Holmes, A. P. (1999) · Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences · doi:10.1098/rstb.1999.0478 · Cited by 186 · see citing works
Generalizable Patterns in Neuroimaging: How Many Principal Components?
Hansen, L. K., Larsen, J. O., Nielsen, F. Å., Strother, S. C., Rostrup, E., Savoy, R. L., LANGE, N. D., Sidtis, J. J., Svarer, C., & Paulson, O. B. (1999) · NeuroImage · doi:10.1006/nimg.1998.0425 · Cited by 154 · see citing works
Analyse Conjointe de Tableaux Quantitatifs
McHale, D., & Lavit, C. (1990) · Biometrics · doi:10.2307/2531464 · Cited by 152 · see citing works
Diagnosis and exploration of massively univariate neuroimaging models
Luo, W., & Nichols, T. E. (2003) · NeuroImage · doi:10.1016/s1053-8119(03)00149-6 · Cited by 151 · see citing works
Anatomic and Functional Variability: The Effects of Filter Size in Group fMRI Data Analysis
White, T. J. H., OʼLeary, D. S., Magnotta, V. A., Arndt, S. V., Flaum, M. A., & Andreasen, N. C. (2001) · NeuroImage · doi:10.1006/nimg.2000.0716 · Cited by 148 · see citing works
Reproducibility of BOLD-based functional MRI obtained at 4 T
Tegeler, C., Strother, S. C., Anderson, J. R., & Kim, S. (1999) · Human Brain Mapping · doi:10.1002/(sici)1097-0193(1999)7:4 · Cited by 121 · see citing works
Estimating test‐retest reliability in functional MR imaging I: Statistical methodology
Genovese, C. R., Noll, D. C., & Eddy, W. F. (1997) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910380319 · Cited by 120 · see citing works
The neuroimaging of human brain function
Posner, M. I., & Raichle, M. E. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.3.763 · Cited by 103 · see citing works
Strother, S. C., Anderson, J. R., Schaper, K. A., Sidtis, J. J., Liow, J., Woods, R. P., & Rottenberg, D. A. (1995) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1038/jcbfm.1995.94 · Cited by 100 · see citing works
Intersubject Variability in Cortical Activations during a Complex Language Task
Xiong, J., Rao, S. L., Jerabek, P., Zamarripa, F., Woldorff, M. G., Lancaster, J. L., & Fox, P. T. (2000) · NeuroImage · doi:10.1006/nimg.2000.0621 · Cited by 98 · see citing works
Test‐retest reliability estimation of functional MRI data
Maitra, R., Roys, S., & Gullapalli, R. P. (2002) · Magnetic Resonance in Medicine · doi:10.1002/mrm.10191 · Cited by 83 · see citing works
Multivariate Model Specification for fMRI Data
Kherif, F. (2002) · NeuroImage · doi:10.1006/nimg.2002.1094 · Cited by 69 · see citing works
Self-citationFunctional MRI and Its Applications to the Clinical Neurosciences
Detre, J. A., & Floyd, T. F. (2001) · The Neuroscientist · doi:10.1177/107385840100700110 · Cited by 68 · see citing works
Functional Neuroimaging of Cognition
D’Esposito, M. (2000) · Seminars in Neurology · doi:10.1055/s-2000-13182 · Cited by 64 · see citing works
Strother, S. C., Kanno, I., & Rottenberg, D. A. (1995) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1038/jcbfm.1995.44 · Cited by 62 · see citing works
Elements of sampling theory and methods
Govindarajulu, Z. (1999) · Cited by 58 · see citing works
Tanaka, Y., & Mori, Y. (1997) · American Journal of Mathematical and Management Sciences · doi:10.1080/01966324.1997.10737430 · Cited by 43 · see citing works
Welchew, D., Honey, G. D., Sharma, T., Robbins, T. W., & Bullmore, E. T. (2002) · NeuroImage · doi:10.1006/nimg.2002.1246 · Cited by 36 · see citing works
Kustra, R., & Strother, S. C. (2001) · IEEE Transactions on Medical Imaging · doi:10.1109/42.925291 · Cited by 35 · see citing works
On Bias in the Estimation of Autocorrelations for fMRI Voxel Time-Series Analysis
Marchini, J., & Smith, S. M. (2002) · NeuroImage · doi:10.1006/nimg.2002.1321 · Cited by 33 · see citing works
Nybakken, G., Quigley, M., Moritz, C. H., Cordes, D., Haughton, V. M., & Meyerand, M. E. (2002) · Neuroradiology · doi:10.1007/s00234-001-0722-6 · Cited by 20 · see citing works
Some comments on escoufier'sRV- coefficient as a sensitivity measure in principal component analysis
Castaño‐Tostado, E., & TANAKA, Y. (1990) · Communication in Statistics- Theory and Methods · doi:10.1080/03610929008830462 · Cited by 10 · see citing works
Neuroimaging and behavior: Probing brain behavior relationships in the 21st century
Mandzia, J. L., & Black, S. E. (2001) · Current Neurology and Neuroscience Reports · doi:10.1007/s11910-001-0061-3 · Cited by 8 · see citing works
Locascio, J. J., Jennings, P. J., & Corkin, S. (1996) · NeuroImage · doi:10.1016/s1053-8119(96)80078-4 · Cited by 3 · see citing works
Multivariate analysis for fMRI data investigation and model checking
Kherif, F., Andrade, A., Benali, H., Bihan, D. L., & Poline, J. (2001) · NeuroImage · doi:10.1016/s1053-8119(01)91514-9 · Cited by 1 · see citing works
Self-citationBush (1998) · doi:10.1002/(sici)1097-0193(1998)6:4
Xiong (1999) · doi:10.1002/(sici)1097-0193(1999)8:2/3
Flagged first, then by citations
Cited by
Sorted by citations
Partial Least Squares (PLS) methods for neuroimaging: A tutorial and review
Krishnan, A., Williams, L. J., McIntosh, A. R., & Abdi, H. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.07.034 · Cited by 1,335 · see citing works
Analysis of a large fMRI cohort: statistical and methodological issues for group analyses
Thirion, B., Pinel, P., Mériaux, S., Roche, A., Dehaene, S., & Poline, J.-B. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2006.11.054 · Cited by 563 · see citing works
Robust group analysis using outlier inference
Woolrich, M. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.02.042 · Cited by 504 · see citing works
Gates, K. M., & Molenaar, P. C. M. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.06.026 · Cited by 478 · see citing works
Independent component analysis of fMRI group studies by self-organizing clustering
Esposito, F., Scarabino, T., Hyvärinen, A., Himberg, J., Formisano, E., Comani, S., Tedeschi, G., Goebel, R., Seifritz, E., & Salle, F. D. (2005) · NeuroImage · doi:10.1016/j.neuroimage.2004.10.042 · Cited by 357 · see citing works
Rosa, P. A. D., Cerami, C., Gallivanone, F., Prestia, A., Caroli, A., Castiglioni, I., Gilardi, M. C., Frisoni, G. B., Friston, K. J., Ashburner, J., et al. (2014) · Neuroinformatics · doi:10.1007/s12021-014-9235-4 · Cited by 315 · see citing works
O’Toole, A. J., Jiang, F., Abdi, H., Pénard, N., Dunlop, J. P., & Parent, M. A. (2007) · Journal of Cognitive Neuroscience · doi:10.1162/jocn.2007.19.11.1735 · Cited by 238 · see citing works
The Statistical Analysis of Functional MRI Data
Lazar, N. A. (2008) · Statistics in the health sciences · doi:10.1007/978-0-387-78191-4 · Cited by 196 · see citing works
Dealing with the shortcomings of spatial normalization: Multi‐subject parcellation of fMRI datasets
Thirion, B., Flandin, G., Pinel, P., Roche, A., Ciuciu, P., & Poline, J. (2005) · Human Brain Mapping · doi:10.1002/hbm.20210 · Cited by 194 · see citing works
Kawasaki, Y., Suzuki, M., Kherif, F., Takahashi, T., Zhou, S.-Y., Nakamura, K., Matsui, M., Sumiyoshi, T., Seto, H., & Kurachi, M. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.08.018 · Cited by 180 · see citing works
Self-citationShinkareva, S. V., Mason, R. A., Malave, V. L., Wang, W., Mitchell, T. M., & Just, M. A. (2008) · PLoS ONE · doi:10.1371/journal.pone.0001394 · Cited by 179 · see citing works
The Animacy Continuum in the Human Ventral Vision Pathway
Sha, L., Haxby, J. V., Abdi, H., Guntupalli, J. S., Oosterhof, N. N., Halchenko, Y. O., & Connolly, A. C. (2014) · Journal of Cognitive Neuroscience · doi:10.1162/jocn_a_00733 · Cited by 172 · see citing works
Pinel, P., Thirion, B., Mériaux, S., Jobert, A., Serres, J., Bihan, D. L., Poline, J., & Dehaene, S. (2007) · BMC Neuroscience · doi:10.1186/1471-2202-8-91 · Cited by 162 · see citing works
Abdi, H., Williams, L. J., Valentin, D., & Dosse, M. B. (2012) · Wiley Interdisciplinary Reviews Computational Statistics · doi:10.1002/wics.198 · Cited by 138 · see citing works
Syntax production in bilinguals
Golestani, N., Alario, F. ‐., Mériaux, S., Bihan, D. L., Dehaene, S., & Pallier, C. (2006) · Neuropsychologia · doi:10.1016/j.neuropsychologia.2005.11.009 · Cited by 138 · see citing works
Measuring Patient Similarities via a Deep Architecture with Medical Concept Embedding
Zhu, Z., Yin, C., Qian, B., Cheng, Y., Wei, J., & Wang, F. (2016) · Proceedings · doi:10.1109/icdm.2016.0086 · Cited by 122 · see citing works
Gates, K. M., Molenaar, P. C. M., Iyer, S. P., Nigg, J. T., & Fair, D. A. (2014) · PLoS ONE · doi:10.1371/journal.pone.0091322 · Cited by 107 · see citing works
DISTATIS: The Analysis of Multiple Distance Matrices
Abdi, H., O’Toole, A. J., Valentin, D., & Edelman, B. (2006) · 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops · doi:10.1109/cvpr.2005.445 · Cited by 93 · see citing works
Abdi, H., Dunlop, J. P., & Williams, L. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.11.008 · Cited by 89 · see citing works
Dynamic Bayesian network modeling of fMRI: A comparison of group-analysis methods
Li, J., Wang, Z. J., Palmer, S. J., & McKeown, M. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.01.068 · Cited by 89 · see citing works
Seghier, M. L., Lee, H. L., Schofield, T. M., Ellis, C., & Price, C. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.05.029 · Cited by 87 · see citing works
Caprihan, A., Pearlson, G. D., & Calhoun, V. D. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.255 · Cited by 81 · see citing works
Seghier, M. L., Josse, G., Leff, A. P., & Price, C. J. (2010) · Cerebral Cortex · doi:10.1093/cercor/bhq203 · Cited by 79 · see citing works
Classification of functional brain images with a spatio-temporal dissimilarity map
Shinkareva, S. V., Ombao, H., Sutton, B. P., Mohanty, A., & Miller, G. A. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.06.032 · Cited by 75 · see citing works
Regional and hemispheric determinants of language laterality: Implications for preoperative fMRI
Seghier, M. L., Kherif, F., Josse, G., & Price, C. J. (2010) · Human Brain Mapping · doi:10.1002/hbm.21130 · Cited by 75 · see citing works
Self-citationWord Reading and Posterior Temporal Dysfunction in Amnestic Mild Cognitive Impairment
Vandenbulcke, M., Peeters, R. R., Dupont, P. J., Hecke, P. V., & Vandenberghe, R. R. (2006) · Cerebral Cortex · doi:10.1093/cercor/bhj179 · Cited by 68 · see citing works
Carter, C. S., Heckers, S., Nichols, T., Pine, D. S., & Strother, S. (2008) · Biological Psychiatry · doi:10.1016/j.biopsych.2008.06.014 · Cited by 67 · see citing works
Attentional responses to unattended stimuli in human parietal cortex
Vandenberghe, R. R., Geeraerts, S., Molenberghs, P., Lafosse, C., Vandenbulcke, M., Peeters, K., Peeters, R. R., Hecke, P. V., & Orban, G. A. (2005) · Brain · doi:10.1093/brain/awh522 · Cited by 67 · see citing works
A amyloid deposition in the language system and how the brain responds
Nelissen, N., Vandenbulcke, M., Fannes, K., Verbruggen, A., Peeters, R. R., Dupont, P. J., Laere, K. V., Bormans, G. M., & Vandenberghe, R. R. (2007) · Brain · doi:10.1093/brain/awm133 · Cited by 67 · see citing works
Great expectations: What can fMRI research tell us about psychological phenomena?☆
Aue, T. (2009) · International Journal of Psychophysiology · doi:10.1016/j.ijpsycho.2008.12.017 · Cited by 62 · see citing works
Statistical Analysis of fMRI Data
Woolrich, M. W., Beckmann, C. F., Nichols, T. E., & Smith, S. M. (2009) · Neuromethods · doi:10.1007/978-1-60327-919-2_7 · Cited by 62 · see citing works
Seghier, M. L., Lazeyras, F., Pegna, A. J., Annoni, J., & Khateb, A. (2007) · Human Brain Mapping · doi:10.1002/hbm.20410 · Cited by 59 · see citing works
The Main Sources of Intersubject Variability in Neuronal Activation for Reading Aloud
Kherif, F., Josse, G., Seghier, M. L., & Price, C. J. (2008) · Journal of Cognitive Neuroscience · doi:10.1162/jocn.2009.21084 · Cited by 58 · see citing works
Self-citationThirion, B., Pinel, P., Tucholka, A., Roche, A., Ciuciu, P., Mangin, J., & Poline, J. (2007) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2007.903226 · Cited by 55 · see citing works
Shinkareva, S. V., Wang, J., Kim, J., Facciani, M. J., Baucom, L. B., & Wedell, D. H. (2013) · Human Brain Mapping · doi:10.1002/hbm.22421 · Cited by 52 · see citing works
Rolland, A., Bertrand, F., Maumy‐Bertrand, M., & Jacquet, S. (2009) · Water Research · doi:10.1016/j.watres.2009.03.049 · Cited by 52 · see citing works
Tomić, O., Forde, C. G., Delahunty, C. M., & Næs, T. (2012) · Food Quality and Preference · doi:10.1016/j.foodqual.2012.06.012 · Cited by 51 · see citing works
Visualising inter-subject variability in fMRI using threshold-weighted overlap maps
Seghier, M. L., & Price, C. J. (2016) · Scientific Reports · doi:10.1038/srep20170 · Cited by 48 · see citing works
Dissociating functional brain networks by decoding the between-subject variability
Seghier, M. L., & Price, C. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.12.017 · Cited by 45 · see citing works
Hupé, J. (2015) · Frontiers in Neuroscience · doi:10.3389/fnins.2015.00018 · Cited by 44 · see citing works
Combined permutation test and mixed‐effect model for group average analysis in fMRI
Mériaux, S., Roche, A., Dehaene‐Lambertz, G., Thirion, B., & Poline, J. (2006) · Human Brain Mapping · doi:10.1002/hbm.20251 · Cited by 44 · see citing works
Iyer, S., Izhak Shafran, J., Grayson, D. S., Gates, K. M., Nigg, J. T., & Fair, D. A. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.02.054 · Cited by 40 · see citing works
Detecting subject-specific activations using fuzzy clustering
Seghier, M. L., Friston, K. J., & Price, C. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.03.021 · Cited by 38 · see citing works
Tzagarakis, C., Jerde, T. A., Lewis, S. M., Uǧurbil, K., & Georgopoulos, A. P. (2009) · Experimental Brain Research · doi:10.1007/s00221-009-1709-5 · Cited by 35 · see citing works
Identification of degenerate neuronal systems based on intersubject variability
Noppeney, U., Penny, W. D., Price, C. J., Flandin, G., & Friston, K. J. (2005) · NeuroImage · doi:10.1016/j.neuroimage.2005.10.010 · Cited by 35 · see citing works
Dynamic Changes in the Mental Rotation Network Revealed by Pattern Recognition Analysis of fMRI Data
Mourão-Miranda, J., Ecker, C., Sato, J. R., & Brammer, M. J. (2008) · Journal of Cognitive Neuroscience · doi:10.1162/jocn.2009.21078 · Cited by 34 · see citing works
Exploring commonalities across participants in the neural representation of objects
Shinkareva, S. V., Malave, V. L., Just, M. A., & Mitchell, T. M. (2011) · Human Brain Mapping · doi:10.1002/hbm.21296 · Cited by 29 · see citing works
Cortical surface alignment in multi-subject spatiotemporal independent EEG source imaging
Tsai, A. C.-H., Jung, T., Chien, V. S. C., Savostyanov, A. N., & Makeig, S. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.09.045 · Cited by 25 · see citing works
Examining Similarity Structure: Multidimensional Scaling and Related Approaches in Neuroimaging
Shinkareva, S. V., Wang, J., & Wedell, D. H. (2013) · Computational and Mathematical Methods in Medicine · doi:10.1155/2013/796183 · Cited by 25 · see citing works
Piaggi, P., Menicucci, D., Gentili, C., Handjaras, G., Gemignani, A., & Landi, A. (2013) · International Journal of Neural Systems · doi:10.1142/s0129065714500105 · Cited by 22 · see citing works
An Iterative Jackknife Approach for Assessing Reliability and Power of fMRI Group Analyses
Wilke, M. (2012) · PLoS ONE · doi:10.1371/journal.pone.0035578 · Cited by 21 · see citing works
Frontal cortical activation during emotional and non-emotional verbal fluency tests
Yeung, M. K.-C. (2022) · Scientific Reports · doi:10.1038/s41598-022-12559-w · Cited by 19 · see citing works
A significance test of the RV coefficient in high dimensions
Ahmad, M. R. (2018) · Computational Statistics & Data Analysis · doi:10.1016/j.csda.2018.10.008 · Cited by 18 · see citing works
The cortical thickness phenotype of individuals with DISC1 translocation resembles schizophrenia
Doyle, O., Bois, C., Thomson, P. A., Romaniuk, L., Whitcher, B. J., Williams, S., Turkheimer, F., Stefánsson, H., McIntosh, A. M., Mehta, M. A., et al. (2015) · Journal of Clinical Investigation · doi:10.1172/jci82636 · Cited by 18 · see citing works
Cerliani, L., Thomas, R. M., Aquino, D., Contarino, V. E., & Bizzi, A. (2016) · Cortex · doi:10.1016/j.cortex.2016.11.017 · Cited by 18 · see citing works
Local Linear Discriminant Analysis (LLDA) for group and region of interest (ROI)-based fMRI analysis
McKeown, M. J., Li, J., Huang, X., Lewis, M. M., Rhee, S., Truong, K. N., & Wang, Z. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.04.072 · Cited by 16 · see citing works
Robust Statistics for Nonparametric Group Analysis in fMRI
Mériaux, S., Roche, A., Thirion, B., & Dehaene‐Lambertz, G. (2006) · IEEE International Symposium on Biomedical Imaging (ISBI) · doi:10.1109/isbi.2006.1625073 · Cited by 15 · see citing works
Finding Landmarks in the Functional Brain: Detection and Use for Group Characterization
Thirion, B., Pinel, P., & Poline, J. (2005) · Lecture notes in computer science · doi:10.1007/11566489_59 · Cited by 15 · see citing works
Analyzing multiset data by the Power STATIS-ACT method
Bénasséni, J., & Dosse, M. B. (2011) · Advances in Data Analysis and Classification · doi:10.1007/s11634-011-0085-8 · Cited by 14 · see citing works
Hippocampal activation during processing of previously seen visual stimulus pairs
Öngür, D., Zalesak, M., Weiss, A. P., Ditman, T., Titone, D. A., & Heckers, S. (2005) · Psychiatry Research Neuroimaging · doi:10.1016/j.pscychresns.2005.05.006 · Cited by 14 · see citing works
Muramatsu, C., Nishimura, K., Endo, T., Oiwa, M., Shiraiwa, M., Doi, K., & Fujita, H. (2013) · Journal of Imaging Informatics in Medicine · doi:10.1007/s10278-012-9569-0 · Cited by 12 · see citing works
Zoffoli, L., Ditroilo, M., Federici, A., & Lucertini, F. (2017) · Journal of Electromyography and Kinesiology · doi:10.1016/j.jelekin.2017.09.002 · Cited by 12 · see citing works
Evaluation of group homogeneity during acupuncture stimulation in fMRI studies
Sun, J., Qin, W., Dong, M., Yuan, K., Liu, J., Liu, P., Zhang, Y., von Deneen, K. M., & Tian, J. (2010) · Journal of Magnetic Resonance Imaging · doi:10.1002/jmri.22238 · Cited by 11 · see citing works
The photovoltaic growth in the European Union requires stronger RES support
Bono, F., & Giacomarra, M. (2016) · Journal of Policy Modeling · doi:10.1016/j.jpolmod.2016.01.003 · Cited by 11 · see citing works
Visbal-Cadavid, D., Delahoz-Domínguez, E., & Mendoza, A. M. (2025) · Decision Analytics Journal · doi:10.1016/j.dajour.2025.100579 · Cited by 10 · see citing works
An adaptive RV measure based fuzzy weighting subspace clustering (ARV-FWSC) for fMRI data analysis
Tang, X., Zeng, W., Wang, N., & Yang, J. (2015) · Biomedical Signal Processing and Control · doi:10.1016/j.bspc.2015.07.006 · Cited by 10 · see citing works
Bertrand, F., & Maumy‐Bertrand, M. (2010) · HAL · Cited by 10 · see citing works
A group analysis using the Multiregression Dynamic Models for fMRI networked time series
da Costa, L. C. C., Smith, J. Q., & Nichols, T. E. (2018) · Journal of Statistical Planning and Inference · doi:10.1016/j.jspi.2018.03.004 · Cited by 9 · see citing works
Kägi, G., Missimer, J. H., Abela, E., Seitz, R. J., & Weder, B. (2010) · Behavioral and Brain Functions · doi:10.1186/1744-9081-6-71 · Cited by 8 · see citing works
A weighted-RV method to detect fine-scale functional connectivity during resting state
Zhang, H., Zhang, X., Sun, Y., Liu, J., Li, W., & Tian, J. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.10.051 · Cited by 8 · see citing works
Statistical Analysis of fMRI Data
Woolrich, M. W., Beckmann, C. F., Nichols, T. E., & Smith, S. M. (2016) · Neuromethods · doi:10.1007/978-1-4939-5611-1_7 · Cited by 8 · see citing works
Kherif, F., & Muller, S. (2020) · Current Topics in Medicinal Chemistry · doi:10.2174/1568026620666200302111130 · Cited by 8 · see citing works
Self-citationQuantifying inter-subject agreement in brain-imaging analyses
Wong, D. K., Grosenick, L., Uy, E. T., Guimaraes, M. P., Carvalhaes, C. G., Desain, P., & Suppes, P. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.07.064 · Cited by 7 · see citing works
Evaluating brain group structure methods using hierarchical dynamic models
da Costa, L. C. C., Anacleto, O., do Nascimento, D. C., Smith, J. Q., Queen, C. M., Louzada, F., & Nichols, T. E. (2024) · Pattern Recognition · doi:10.1016/j.patcog.2024.110687 · Cited by 4 · see citing works
Early Prognosis Models in Aphasia
Kherif, F., & Muller, S. (2015) · Elsevier eBooks · doi:10.1016/b978-0-12-397025-1.00093-2 · Cited by 4 · see citing works
Self-citationThirion, B., Roche, A., Ciuciu, P., & Poline, J.-B. (2006) · IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW) · doi:10.1109/cvprw.2006.99 · Cited by 4 · see citing works
Quantification of inter-subject variability in human brain and its impact on analysis of fmri data
Tahmasebi, A. M. (2010) · QSpace (Queen's University Library) · Cited by 4 · see citing works
A Similarity Retrieval Tool for Functional Magnetic Resonance Imaging Statistical Maps
Tungaraza, R. F., Guan, J., Shapiro, L. G., Brinkley, J. F., Ojemann, J. G., & Franklin, J. M. (2013) · International Journal of Biomedical Data Mining · doi:10.4303/ijbdm/235531 · Cited by 3 · see citing works
covSTATIS: A multi-table technique for network neuroscience
Baracchini, G., Yu, J., Rieck, J. R., Beaton, D., Guillemot, V., Grady, C. L., Abdi, H., & Spreng, R. N. (2024) · Aperture Neuro · doi:10.52294/001c.124518 · Cited by 2 · see citing works
Piaggi, P., Menicucci, D., Gentili, C., Handjaras, G., Laurino, M., Piarulli, A., Guazzelli, M., Gemignani, A., & Landi, A. (2011) · International Conference on Intelligent Systems Design and Applications (ISDA) · doi:10.1109/isda.2011.6121661 · Cited by 2 · see citing works
Direct Measure of Local Region Functional Connectivity by Multivariate Correlation Technique
Zhang, H., Tian, J., & Zhen, Z. (2007) · Conference proceedings · doi:10.1109/iembs.2007.4353521 · Cited by 2 · see citing works
Okamoto, Y., Kitada, R., Kochiyama, T., Naruse, H., Makita, K., Miyahara, M., Okazawa, H., & Kosaka, H. (2020) · Cerebral Cortex Communications · doi:10.1093/texcom/tgaa007 · Cited by 2 · see citing works
Measuring Patient Similarities via a Deep Architecture with Medical Concept EmbeddingPreprint
Zhu, Z., Yin, C., Qian, B., Cheng, Y., Wei, J., & Wang, F. (2019) · arXiv (Cornell University) · Cited by 2 · see citing works
The Factorial Minimum Spanning Tree as a Reference for a Synthetic Index of Complex Phenomena
Scippacercola, S. (2011) · Journal of Classification · doi:10.1007/s00357-011-9076-x · Cited by 1 · see citing works
3.2 Using ICA for the Analysis of fMRI Data
Valente, G., Esposito, F., Martino, F. D., Goebel, R., & Formisano, E. (2010) · Oxford University Press eBooks · doi:10.1093/acprof:oso/9780195372731.003.0009 · Cited by 1 · see citing works
Muller, S., Dauyey, K., Ruef, A., Lorio, S., Eskandari, A., Schneider, L., Beaud, V., Roggenhofer, E., Draganski, B., Michel, P., et al. (2020) · Current Topics in Medicinal Chemistry · doi:10.2174/1568026620666200211113824 · Cited by 1 · see citing works
Self-citationLocal Linear Discriminant Analysis (LLDA) for Inference of Multisubject FMRI Data
McKeown, M. J., Li, J., Huang, X., & Wang, Z. J. (2007) · IEEE International Conference on Acoustics Speech and Signal Processing · doi:10.1109/icassp.2007.366677 · Cited by 1 · see citing works
Parallel magnetic resonance imaging reconstruction problems using wavelet representations
Chaâri, L. (2010) · theses.fr (ABES) · doi:10.70675/c594fd88za4d7z4f8cz812ez4b9c029ce3d0 · Cited by 1 · see citing works
MÉTODOS PARA SELEÇÃO E AVALIAÇÃO DE ASSESSORES SENSORIAIS
Pinto, F. S. T. (2013) · Americanae (AECID Library)
A spatial discrepancy measure between voxel sets in brain imaging
Kuncheva, L. I., Martínez‐Rego, D., Yuen, K. S. L., Linden, D. E. J., & Johnston, S. J. (2012) · Signal Image and Video Processing · doi:10.1007/s11760-012-0326-0
Visualising the distribution of subjects using t-SNE
Ridgway, G. R., & Ashburner, J. (2012) · F1000Research · doi:10.7490/f1000research.1091995.1
Structural and probabilistic methods for group analysis in functional neuroimaging
Thirion, B. (2009) · HAL
Benhajali, Y., Badhwar, A., Urchs, S. G. W., Moreau, C. A., Chouinard-Decorte, F., Vainik, U., Ferré, P., Orban, P., Pérusse, D., & Bellec, P. (2020) · doi:10.31234/osf.io/excdq
Neurostructural and neurocognitive correlates of APOE ε4 in youth bipolar disorder
Puramat, P., Dimick, M. K., Kennedy, K. G., Zai, C. C. H., Kennedy, J. L., MacIntosh, B. J., & Goldstein, B. I. (2023) · Journal of Psychopharmacology · doi:10.1177/02698811221147151
Nuevas contribuciones en aplicaciones de fusión multimodal de bioseñales
González, L. M. P. (2024) · doi:10.4995/thesis/10251/213614
Statistical Analysis of fMRI Data
Woolrich, M. W., Beckmann, C. F., Nichols, T. E., Smith, S. M., Valsasina, P., Rocca, M. A., & Filippi, M. (2025) · Neuromethods · doi:10.1007/978-1-0716-4438-6_7
Boere, E., van der Wee, N. J., & de Leeuw, M. (2026) · Translational Psychiatry · doi:10.1038/s41398-026-03868-z
- Authors
- Kherif, F.
- Affiliations
- MRC Cognition and Brain Sciences Unit (GB)
- Corresponding author
- Kherif, F
- ORCID
- Kherif, F
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2003-12
- Volume
- 20
- Issue
- 4
- Pages
- 2197-2208
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W2024545575
- Cited by
- 100
- References
- 52
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 3 · 2023: 1 · 2022: 1 · 2020: 4 · 2019: 1 · 2018: 2 · 2017: 1 · 2016: 5 · 2015: 4 · 2014: 4 · 2013: 8 · 2012: 6
- FWCI
- 2.28
- Type
- journal article
- Language
- en
- Open access
- green
- cea.hal.science
- Licence
- Locations
- NeuroImage (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion, other-oa)
- UCL Discovery (University College London) (submittedVersion)
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced MRI Techniques and Applications
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
- Keywords
- group analysis, functional MRI, participant selection, interindividual variability, similarity measures, RV coefficient, multidimensional scaling, outlier detection, spatial and temporal averaging
- MeSH terms
- Algorithms, Data Interpretation, Statistical, Humans, Individuality, Magnetic Resonance Imaging, Models, Neurological, Nervous System, Population, Psychomotor Performance, Time Factors, Reproducibility of Results, Artifacts, Patient Selection
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review