The DOI matches its Crossref record; 9 of the 9 references it cites were found in a registry or an index.
A population-average MRI-based atlas collection of the rhesus macaque
Open accessAbstract
Magnetic resonance imaging (MRI) studies of non-human primates are becoming increasingly common; however, the well-developed voxel-based methodologies used in human studies are not readily applied to non-human primates. In the present study, we create a population-average MRI-based atlas collection for the rhesus macaque (Macaca mulatta) that can be used with common brain mapping packages such as SPM or FSL. In addition to creating a publicly available T1-weighted atlas (http://www.brainmap.wisc.edu/monkey.html), probabilistic tissue classification maps and T2-weighted atlases were also created. Theses atlases are aligned to the MRI volume from the Saleem-Logothetis (2006) atlas providing an explicit link to histological sections. Additionally, we have created a transform to integrate these atlases with the F99 surface-based atlas in CARET. It is anticipated that these tools will help facilitate voxel-based imaging methodologies in non-human primate species, which in turn may increase our understanding of brain function, development, and evolution.
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Advances in functional and structural MR image analysis and implementation as FSL
Smith, S. M., Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., et al. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.07.051 · Cited by 13,630
Voxel-Based Morphometry—The Methods
Ashburner, J., & Friston, K. J. (2000) · NeuroImage · doi:10.1006/nimg.2000.0582 · Cited by 8,676
A fast diffeomorphic image registration algorithm
Ashburner, J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.07.007 · Cited by 8,122
A Voxel-Based Morphometric Study of Ageing in 465 Normal Adult Human Brains
Good, C. D., Johnsrude, I. S., Ashburner, J., Henson, R. N. A., Friston, K. J., & Frackowiak, R. S. J. (2001) · NeuroImage · doi:10.1006/nimg.2001.0786 · Cited by 4,561
Intrinsic functional architecture in the anaesthetized monkey brain
Vincent, J. L., Patel, G. H., Fox, M. D., Snyder, A. Z., Baker, J. T., Van Essen, D. C., Zempel, J. M., Snyder, L. H., Corbetta, M., & Raichle, M. E. (2007) · Nature · doi:10.1038/nature05758 · Cited by 1,786
How Many Subjects Constitute a Study?
Friston, K. J., Holmes, A. P., & Worsley, K. J. (1999) · NeuroImage · doi:10.1006/nimg.1999.0439 · Cited by 814 · cited 4×
“These atlases can be used to align many individual monkeys together to carry out voxel-based analyses (Ashburner et al., 1998; Friston et al., 1999a; 1999b; Woods, 1996; Zeffiro et al., 1997) and such analyses could potentially be conducted with existing tools such as FSL and SPM (Alexander et al.,…”
InfluentialCortical folding patterns and predicting cytoarchitecture
Fischl, B., Rajendran, N., Busa, E., Augustinack, J., Hinds, O., Yeo, B. T. T., Mohlberg, H., Amunts, K., & Zilles, K. (2008) · Cerebral Cortex · doi:10.1093/cercor/bhm225 · Cited by 737
The human inferior parietal cortex: Cytoarchitectonic parcellation and interindividual variability
Caspers, S., Geyer, S., Schleicher, A., Mohlberg, H., Amunts, K., & Zilles, K. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.06.054 · Cited by 634 · cited 2×
“Furthermore, there is more than 35 years of electrophysiology and histology work that is unparalleled in humans that can be potentially incorporated into these atlases (Crick and Jones, 1993; Kalwani et al., in press).”
Devlin, J. T., & Poldrack, R. A. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2006.09.055 · Cited by 195
Cited by
Neural effects of propofol-induced unconsciousness and its reversal using thalamic stimulation
Bastos, A. M., Donoghue, J. A., Brincat, S. L., Mahnke, M., Yanar, J., Correa, J., Waite, A. S., Lundqvist, M., Roy, J., Brown, E. N., et al. (2021) · eLife · doi:10.7554/elife.60824 · Cited by 166
Kastman, E. K., Willette, A. A., Coe, C. L., Bendlin, B. B., Kosmatka, K. J., McLaren, D. G., Xu, G., Canu, E., Field, A. S., Alexander, A. L., et al. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.0835-10.2010 · Cited by 85
Self-citationLong-term alterations in brain and behavior after postnatal Zika virus infection in infant macaques
Raper, J., Kovacs-Balint, Z., Mavigner, M., Gumber, S., Burke, M. W., Habib, J., Mattingly, C., Fair, D., Earl, E., Feczko, E., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-16320-7 · Cited by 67
Nitzsche, B., Frey, S., Collins, L. D., Seeger, J., Lobsien, D., Dreyer, A., Kirsten, H., Stoffel, M. H., Fonov, V. S., & Boltze, J. (2015) · Frontiers in Neuroanatomy · doi:10.3389/fnana.2015.00069 · Cited by 61
“…such as dogs (77 mL; mesencephalic breeds; Schmidt et al., 2014), non-human-primates (29x2/80/98 mL; Macaque fascicularis/mulatta/nemestrina; McLaren et al., 2009), and sheep (see Table 4 ) is nearly about 10 fold smaller than human brain volume (1,087/962 mL; male/female; Allen et al.,…”
BackgroundWillette, A. A., Bendlin, B. B., McLaren, D. G., Canu, E., Kastman, E. K., Kosmatka, K. J., Xu, G., Field, A. S., Alexander, A. L., Colman, R. J., et al. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.03.015 · Cited by 55
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Metadata
- Authors
- McLaren, D. G., Kosmatka, K. J., Oakes, T. R., Kroenke, C. D., Kohama, S. G., Matochik, J. A., Ingram, D. K., & Johnson, S. C.
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2009-03
- Volume
- 45
- Issue
- 1
- Pages
- 52-59
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W2105612509
- Cited by
- 239
- References
- 9
- FWCI
- 14.80
- Type
- journal article
- Language
- en
- Open access
- green
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- McLaren, D. G., Kosmatka, K. J., Oakes, T. R., Kroenke, C. D., Kohama, S. G., Matochik, J. A., Ingram, D. K., & Johnson, S. C. (2009). A population-average MRI-based atlas collection of the rhesus macaque. NeuroImage. https://doi.org/10.1016/j.neuroimage.2008.10.058
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