The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
AFNI: What a long strange trip it's been
Open accessAbstract
AFNI is an open source software package for the analysis and display of functional MRI data. It originated in 1994 to meet the specific needs of researchers at the Medical College of Wisconsin, in particular the mapping of activation maps to Talairach-Tournoux space, but has been expanded steadily since then into a wide-ranging set of tool for FMRI data analyses. AFNI was the first platform for real-time 3D functional activation and registration calculations. One of AFNI’s main strengths is its flexibility and transparency. In recent years, significant efforts have been made to increase the user-friendliness of AFNI’s FMRI processing stream, with the introduction of “super-scripts” to setup the entire analysis, and graphical front-ends for these managers.
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Cites
AFNI: Software for analysis and visualization of functional magnetic resonance neuroimages
Cox, R. W. (1996) · Computers and Biomedical Research · doi:10.1006/cbmr.1996.0014 · Cited by 10,913
Self-citationA new SPM toolbox for combining probabilistic cytoarchitectonic maps and functional imaging data
Eickhoff, S. B., Stephan, K. E., Mohlberg, H., Grefkes, C., Fink, G. R., Amunts, K., & Zilles, K. (2005) · NeuroImage · doi:10.1016/j.neuroimage.2004.12.034 · Cited by 4,033
Time course EPI of human brain function during task activation
Bandettini, P. A., Wong, E. C., Hinks, R. S., Tikofsky, R. S., & Hyde, J. S. (1992) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910250220 · Cited by 1,935
A new method for improving functional-to-structural MRI alignment using local Pearson correlation
Saad, Z. S., Glen, D. R., Chen, G., Beauchamp, M. S., Desai, R., & Cox, R. W. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2008.09.037 · Cited by 405
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Scanning the horizon: towards transparent and reproducible neuroimaging research
Poldrack, R. A., Baker, C. I., Durnez, J., Gorgolewski, K. J., Matthews, P. M., Munafò, M. R., Nichols, T. E., Poline, J.-B., Vul, E., & Yarkoni, T. (2017) · Nature Reviews Neuroscience · doi:10.1038/nrn.2016.167 · Cited by 1,410
Dipy, a library for the analysis of diffusion MRI data
Garyfallidis, E., Brett, M., Amirbekian, B., Rokem, A., van der Walt, S., Descoteaux, M., Nimmo-Smith, I., & Contributors, D. (2014) · Frontiers in Neuroinformatics · doi:10.3389/fninf.2014.00008 · Cited by 1,371
“Many of these tools are written in C/C ++ : 3D Slicer (Pieper et al., 2006), AFNI (Cox, 2012), MITK (Fritzsche et al., 2012), BrainVoyager QX (Goebel, 2012), DTI-Query/Quench (Sherbondy et al., 2005), FreeSurfer (Fischl, 2012), FSL-FDT (Smith et al., 2004), MedInria (Toussaint et al., 2007), MRtrix…”
MethodA hitchhiker's guide to diffusion tensor imaging
Soares, J. M., Marques, P., Alves, V., & Sousa, N. (2013) · Frontiers in Neuroscience · doi:10.3389/fnins.2013.00031 · Cited by 893
Kiviniemi, V., Wang, X., Korhonen, V., Keinänen, T., Tuovinen, T., Autio, J., LeVan, P., Keilholz, S., Zang, Y.-F., Hennig, J., et al. (2016) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1177/0271678x15622047 · Cited by 453
Baird, B., Smallwood, J., Gorgolewski, K. J., & Margulies, D. S. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.0786-13.2013 · Cited by 315
Metadata
- Authors
- Cox, R. W.
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2012-08
- Volume
- 62
- Issue
- 2
- Pages
- 743-747
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W1989334446
- Cited by
- 341
- References
- 4
- FWCI
- 6.18
- Type
- journal article
- Language
- en
- Open access
- green
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
