The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
Simultaneous Multi-plane Imaging of Neural Circuits
Open accessAbstract
Summary Recording the activity of large populations of neurons is an important step towards understanding the emergent function of neural circuits. Here we present a simple holographic method to simultaneously perform two-photon calcium imaging of neuronal populations across multiple areas and layers of mouse cortex in vivo. We use prior knowledge of neuronal locations, activity sparsity and a constrained nonnegative matrix factorization algorithm to extract signals from neurons imaged simultaneously and located in different focal planes or fields of view. Our laser multiplexing approach is simple and fast and could be used as a general method to image the activity of neural circuits in three dimensions across multiple areas in the brain.
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Citations
Cites
Ultrasensitive fluorescent proteins for imaging neuronal activity
Chen, T.-W., Wardill, T. J., Sun, Y., Pulver, S. R., Renninger, S. L., Baohan, A., Schreiter, E. R., Kerr, R. A., Orger, M. B., Jayaraman, V., et al. (2013) · Nature · doi:10.1038/nature12354 · Cited by 6,474
London, M., & Häusser, M. (2005) · Annual Review of Neuroscience · doi:10.1146/annurev.neuro.28.061604.135703 · Cited by 1,149
Highly selective receptive fields in mouse visual cortex
Niell, C. M., & Stryker, M. P. (2008) · The Journal of Neuroscience · doi:10.1523/jneurosci.0623-08.2008 · Cited by 1,081
Yuste, R., & Katz, L. C. (1991) · Neuron · doi:10.1016/0896-6273(91)90243-s · Cited by 591
Self-citationFast nonnegative deconvolution for spike train inference from population calcium imaging
Vogelstein, J. T., Packer, A. M., Machado, T. A., Sippy, T., Babadi, B., Yuste, R., & Paninski, L. (2010) · Journal of Neurophysiology · doi:10.1152/jn.01073.2009 · Cited by 449
Self-citationInhibitory interneurons in a cortical column form hot zones of inhibition in layers 2 and 5A
Meyer, H. S., Schwarz, D., Wimmer, V. C., Schmitt, A. C., Kerr, J. N. D., Sakmann, B., & Helmstaedter, M. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1113648108 · Cited by 254
Development of direction selectivity in mouse cortical neurons
Rochefort, N. L., Narushima, M., Grienberger, C., Marandi, N., Hill, D. N., & Konnerth, A. (2011) · Neuron · doi:10.1016/j.neuron.2011.06.013 · Cited by 178
Cited by
Cortical layer-specific critical dynamics triggering perception
Marshel, J. H., Kim, Y. S., Machado, T. A., Quirin, S., Benson, B., Kadmon, J., Raja, C., Chibukhchyan, A., Ramakrishnan, C., Inoue, M., et al. (2019) · Science · doi:10.1126/science.aaw5202 · Cited by 652
In vivo imaging of neural activity
Yang, W., & Yuste, R. (2017) · Nature Methods · doi:10.1038/nmeth.4230 · Cited by 406
Self-citationProgress in Brain Computer Interface: Challenges and Opportunities
Saha, S., Mamun, K. A., Ahmed, K., Mostafa, R., Naik, G. R., Darvishi, S., Khandoker, A. H., & Baumert, M. (2021) · Frontiers in Systems Neuroscience · doi:10.3389/fnsys.2021.578875 · Cited by 365
dal Maschio, M., Donovan, J. C., Helmbrecht, T. O., & Baier, H. (2017) · Neuron · doi:10.1016/j.neuron.2017.04.034 · Cited by 169
Neocortical dynamics during whisker-based sensory discrimination in head-restrained mice
Helmchen, F., Gilad, A., & Chen, J. L. (2018) · Neuroscience · doi:10.1016/j.neuroscience.2017.09.003 · Cited by 38
“Fourth, improved microscopy techniques, including holographic methods (Yang et al., 2016) and 3-photon microscopy with novel laser types (Ouzounov et al., 2017), as well as recent advances in the in vivo application of red-shifted calcium indicators (Dana et al., 2016) (Bethge et al., 2017) should…”
Metadata
- Authors
- Yang, W., Miller, J.-E. K., Carrillo-Reid, L., Pnevmatikakis, E., Paninski, L., Yuste, R., & Peterka, D. S.
- Venue
- Neuron
- Publisher
- Elsevier BV
- Published
- 2016-01
- Volume
- 89
- Issue
- 2
- Pages
- 269-284
- ISSN
- 0896-6273 (ISSN-L)
- OpenAlex
- W2228707969
- Cited by
- 229
- References
- 7
- FWCI
- 20.35
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Yang, W., Miller, J.-E. K., Carrillo-Reid, L., Pnevmatikakis, E., Paninski, L., Yuste, R., & Peterka, D. S. (2016). Simultaneous Multi-plane Imaging of Neural Circuits. Neuron. https://doi.org/10.1016/j.neuron.2015.12.012
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
