The DOI matches its Crossref record; 82 of the 82 references it cites were found in a registry or an index.
Protein Language: Post-Translational Modifications Talking to Each Other
Abstract
Post-translational modifications (PTMs) are at the heart of many cellular signaling events. Apart from a single regulatory PTM, there are also PTMs that function in orchestrated manners. Such PTM crosstalk usually serves as a fine-tuning mechanism to adjust cellular responses to the slightest changes in the environment. While PTM crosstalk has been studied in depth in various species; in plants, this field is just emerging. In this review, we discuss recent studies on crosstalk between three of the most common protein PTMs in plant cells, being phosphorylation, ubiquitination, and sumoylation, and we highlight the diverse underlying mechanisms as well as signaling outputs of such crosstalk.
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Cites
UniProt: the Universal Protein knowledgebase
Apweiler, R. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh131 · Cited by 7,498
UniProt: the universal protein knowledgebase
The UniProt Consortium (2017) · Nucleic Acids Research · doi:10.1093/nar/gkw1099 · Cited by 4,436
Proteoform: a single term describing protein complexity
The Consortium for Top Down Proteomics, Smith, L. M., & Kelleher, N. L. (2013) · Nature Methods · doi:10.1038/nmeth.2369 · Cited by 1,528
The ubiquitin–26S proteasome system at the nexus of plant biology
Vierstra, R. D. (2009) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2688 · Cited by 1,321
The Age of Crosstalk: Phosphorylation, Ubiquitination, and Beyond
Hunter, T. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.11.019 · Cited by 942
How many human proteoforms are there?
Aebersold, R., Agar, J. N., Amster, I. J., Baker, M. S., Bertozzi, C. R., Boja, E. S., Costello, C. E., Cravatt, B. F., Fenselau, C., Garcia, B. A., et al. (2018) · Nature Chemical Biology · doi:10.1038/nchembio.2576 · Cited by 907
Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes
Vlastaridis, P., Kyriakidou, P., Chaliotis, A., Van de Peer, Y., Oliver, S. G., & Amoutzias, G. D. (2017) · GigaScience · doi:10.1093/gigascience/giw015 · Cited by 733
Direct Ubiquitination of Pattern Recognition Receptor FLS2 Attenuates Plant Innate Immunity
Lu, D., Lin, W., Gao, X., Wu, S., Cheng, C., Avila, J., Heese, A., Devarenne, T. P., He, P., & Shan, L. (2011) · Science · doi:10.1126/science.1204903 · Cited by 619
Integrated proteomic analysis of post-translational modifications by serial enrichment
Mertins, P., Qiao, J. W., Patel, J., Udeshi, N. D., Clauser, K. R., Mani, D. R., Burgess, M. W., Gillette, M. A., Jaffe, J. D., & Carr, S. A. (2013) · Nature Methods · doi:10.1038/nmeth.2518 · Cited by 618
RING-type E3 ligases: Master manipulators of E2 ubiquitin-conjugating enzymes and ubiquitination
Metzger, M. B., Pruneda, J. N., Klevit, R. E., & Weissman, A. M. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2013.05.026 · Cited by 611
Research works printed but not linked: 19
- Tomanov, 2018, Sumoylation and phosphorylation: hidden and overt links, J. Exp. Bot., 69, 4583, 10.1093/jxb/ery167 · doi:10.1093/jxb/ery167
- Hunter, 2007, The age of crosstalk: phosphorylation, ubiquitination, and beyond, Mol. Cell, 28, 730, 10.1016/j.molcel.2007.11.019 · DOI · Paper page
- Lyzenga, 2017, The kinase activity of calcineurin B-like interacting protein kinase 26 (CIPK26) influences its own stability and that of the ABA-regulated ubiquitin ligase, Keep on Going (KEG), Front. Plant Sci., 8, 502, 10.3389/fpls.2017.00502 · doi:10.3389/fpls.2017.00502
- Monaghan, 2018, Conserved degradation of orthologous RLCKs regulates immune homeostasis, Trends Plant Sci., 23, 554, 10.1016/j.tplants.2018.05.001 · doi:10.1016/j.tplants.2018.05.001
- Cheng, 2017, SCFAtPP2-B11 modulates ABA signaling by facilitating SnRK2.3 degradation in Arabidopsis thaliana, PLoS Genet., 13, 10.1371/journal.pgen.1006947 · doi:10.1371/journal.pgen.1006947
- Augustine, 2016, Defining the SUMO system in maize: SUMOylation is up-regulated during endosperm development and rapidly induced by stress, Plant Physiol., 171, 2191, 10.1104/pp.16.00353 · doi:10.1104/pp.16.00353
- Khan, 2014, Interplay between phosphorylation and SUMOylation events determines CESTA protein fate in brassinosteroid signalling, Nat. Commun., 5, 4687, 10.1038/ncomms5687 · doi:10.1038/ncomms5687
- Lee, 2015, Systemic immunity requires SnRK2.8-mediated nuclear import of NPR1 in Arabidopsis, Plant Cell, 27, 3425, 10.1105/tpc.15.00371 · doi:10.1105/tpc.15.00371
- Elrouby, 2010, Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes, Proc. Natl. Acad. Sci., 107, 17415, 10.1073/pnas.1005452107 · doi:10.1073/pnas.1005452107
- Miller, 2010, Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis, Proc. Natl. Acad. Sci., 107, 16512, 10.1073/pnas.1004181107 · DOI · Paper page
- McManus, 2017, Identification of cross talk between SUMOylation and ubiquitylation using a sequential peptide immunopurification approach, Nat. Protoc., 12, 2342, 10.1038/nprot.2017.105 · doi:10.1038/nprot.2017.105
- Budhiraja, 2009, Substrates related to chromatin and to RNA-dependent processes are modified by Arabidopsis SUMO isoforms that differ in a conserved residue with influence on desumoylation, Plant Physiol., 149, 1529, 10.1104/pp.108.135053 · doi:10.1104/pp.108.135053
- Crozet, 2016, SUMOylation represses SnRK1 signaling in Arabidopsis, Plant J., 85, 120, 10.1111/tpj.13096 · doi:10.1111/tpj.13096
- Lin, 2016, An Arabidopsis SUMO E3 ligase, SIZ1, negatively regulates photomorphogenesis by promoting COP1 activity, PLoS Genet., 12, 1, 10.1371/journal.pgen.1006016 · doi:10.1371/journal.pgen.1006016
- Sadanandom, 2015, SUMOylation of phytochrome-B negatively regulates light-induced signaling in Arabidopsis thaliana, Proc. Natl. Acad. Sci., 112, 11108, 10.1073/pnas.1415260112 · doi:10.1073/pnas.1415260112
- Kim, 2018, Nitrate reductases are relocalized to the nucleus by atSIZ1 and their levels are negatively regulated by COP1 and ammonium, Int. J. Mol. Sci., 19, 1
- Nukarinen, 2017, Protein sumoylation and phosphorylation intersect in Arabidopsis signaling, Plant J., 91, 505, 10.1111/tpj.13575 · doi:10.1111/tpj.13575
- Yates, 2016, SUMO proteases: uncovering the roles of deSUMOylation in plants, J. Exp. Bot., 67, 2541, 10.1093/jxb/erw092 · doi:10.1093/jxb/erw092
- Walton, 2016, It’s time for some ‘site’-seeing: novel tools to monitor the ubiquitin landscape in Arabidopsis thaliana, Plant Cell, 28, 6, 10.1105/tpc.15.00878 · DOI
Cited by
Regulating tumor suppressor genes: post-translational modifications
Chen, L., Liu, S., & Tao, Y. (2020) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-020-0196-9 · Cited by 449
Zhong, Q., Xiao, X., Qiu, Y., Xu, Z., Chen, C., Chong, B., Zhao, X., Hai, S., Li, S., An, Z., et al. (2023) · MedComm · doi:10.1002/mco2.261 · Cited by 442
Signaling Toward Reactive Oxygen Species-Scavenging Enzymes in Plants
Dvořák, P., Krasylenko, Y., Zeiner, A., Šamaj, J., & Takáč, T. (2021) · Frontiers in Plant Science · doi:10.3389/fpls.2020.618835 · Cited by 375
Warinner, C., Korzow Richter, K., & Collins, M. J. (2022) · Chemical Reviews · doi:10.1021/acs.chemrev.1c00703 · Cited by 178
Zhang, S., Guo, M., Jiang, X., Tang, L., Wu, T., Bi, G., Yang, X., Fan, S., & Bi, H. (2023) · Pharmacological Research · doi:10.1016/j.phrs.2023.106666 · Cited by 37
Metadata
- Authors
- Vu, L. D., Gevaert, K., & De Smet, I.
- Venue
- Trends in Plant Science
- Publisher
- Elsevier BV
- Published
- 2018-12
- Volume
- 23
- Issue
- 12
- Pages
- 1068-1080
- ISSN
- 1360-1385 (ISSN-L)
- OpenAlex
- W2893791677
- Cited by
- 371
- References
- 82
- FWCI
- 1.55
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
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