Vaccination and antigenic drift in influenza
Open accessAbstract
The relationship between influenza antigenic drift and vaccination lies at the intersection of evolutionary biology and public health, and it must be viewed and analyzed in both contexts simultaneously. In this paper, 1 review what is known about the effects of antigenic drift on vaccination and the effects of vaccination on antigenic drift, and I suggest some simple ways to detect the presence of antigenic drift in seasonal influenza data. If antigenic drift occurs on the time scale of a single influenza season, it may be associated with the presence of herd immunity at the beginning of the season and may indicate a need to monitor for vaccine updates at the end of the season. The relationship between antigenic drift and vaccination must also be viewed in the context of the global circulation of influenza strains and the seeding of local and regional epidemics. In the data sets I consider--from New Zealand, New York, and France--antigenic drift can be statistically detected during some seasons, and seeding of epidemics appears to be endogenous sometimes and exogenous at other times. Improved detection of short-term antigenic drift and epidemic seeding would significantly benefit influenza monitoring efforts and vaccine selection.
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Each pathogen poses a unique set of challenges, including high lethality, rapid mutations, immune evasion, new strains and variants.
“Each pathogen poses a unique set of challenges, including high lethality, rapid mutations, immune evasion, new strains and variants252–258.”
From mRNA vaccines for infectious diseases: principles, delivery and clinical translation (2021) · cites this paper as [253]
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Evolution and ecology of influenza A viruses
Webster, R. G., Bean, W. J., Gorman, O. T., Chambers, T. M., & Kawaoka, Y. (1992) · Microbiological Reviews · doi:10.1128/mr.56.1.152-179.1992 · Cited by 4,739 · see citing works
Mapping the Antigenic and Genetic Evolution of Influenza Virus
Smith, D. J., Lapedes, A. S., de Jong, J. C., Bestebroer, T. M., Rimmelzwaan, G. F., Osterhaus, A. D. M. E., & Fouchier, R. A. M. (2004) · Science · doi:10.1126/science.1097211 · Cited by 1,868 · see citing works
Unifying the Epidemiological and Evolutionary Dynamics of Pathogens
Grenfell, B. T., Pybus, O. G., Gog, J. R., Wood, J. L. N., Daly, J. M., MUMFORD, J. A., & Holmes, E. C. (2004) · Science · doi:10.1126/science.1090727 · Cited by 1,370 · see citing works
Herd Immunity: History, Theory, Practice
Fine, P. (1993) · Epidemiologic Reviews · doi:10.1093/oxfordjournals.epirev.a036121 · Cited by 906 · see citing works
Global Epidemiology of Influenza: Past and Present
Cox, N. J., & Subbarao, K. (2000) · Annual Review of Medicine · doi:10.1146/annurev.med.51.1.407 · Cited by 838 · see citing works
Synchrony, Waves, and Spatial Hierarchies in the Spread of Influenza
Viboud, C. G., Bjørnstad, O. N., Smith, D. L., Simonsen, L., Miller, M. A., & Grenfell, B. T. (2006) · Science · doi:10.1126/science.1125237 · Cited by 832 · see citing works
The theory of gene frequencies
Wright, S. (1969) · University of Chicago Press eBooks · Cited by 755 · see citing works
Ecological and immunological determinants of influenza evolution.
Ferguson, N. M., Galvani, A. P., & Bush, R. M. (2003) · Nature · doi:10.1038/nature01509 · Cited by 746 · see citing works
Structural Basis of Immune Recognition of Influenza Virus Hemagglutinin
Wilson, I. A., & Cox, N. J. (1990) · Annual Review of Immunology · doi:10.1146/annurev.iy.08.040190.003513 · Cited by 571 · see citing works
The annual production cycle for influenza vaccine
Gerdil, C. (2003) · Vaccine · doi:10.1016/s0264-410x(03)00071-9 · Cited by 529 · see citing works
Predicting the Evolution of Human Influenza A
Bush, R. M., Bender, C. A., Subbarao, K., Cox, N. J., & Fitch, W. M. (1999) · Science · doi:10.1126/science.286.5446.1921 · Cited by 524 · see citing works
The evolution of human influenza viruses
Hay, A. J., Gregory, V., Douglas, A., & Lin, Y. P. (2001) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2001.0999 · Cited by 493 · see citing works
Couch, R. B., & Kasel, J. A. (1983) · Annual Review of Microbiology · doi:10.1146/annurev.mi.37.100183.002525 · Cited by 426 · see citing works
Shortridge, K. F., & Stuart-Harris, C. H. (1982) · The Lancet · doi:10.1016/s0140-6736(82)92693-9 · Cited by 414 · see citing works
Effect of Vaccine Use in the Evolution of Mexican Lineage H5N2 Avian Influenza Virus
Lee, C.-W., Senne, D. A., & Suarez, D. L. (2004) · Journal of Virology · doi:10.1128/jvi.78.15.8372-8381.2004 · Cited by 372 · see citing works
Holmes, E. C., Ghedin, E., Miller, N., Taylor, J., Bào, Y., George, K. S., Grenfell, B. T., Salzberg, S. L., Fraser, C. M., Lipman, D. J., et al. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0030300 · Cited by 363 · see citing works
Positive selection on the H3 hemagglutinin gene of human influenza virus A
Bush, R. M., Fitch, W. M., Bender, C. A., & Cox, N. J. (1999) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a026057 · Cited by 350 · see citing works
Both, G. W., Sleigh, M. J., Cox, N. J., & Kendal, A. P. (1983) · Journal of Virology · doi:10.1128/jvi.48.1.52-60.1983 · Cited by 327 · see citing works
Evolution of the H3 influenza virus hemagglutinin from human and nonhuman hosts
Bean, W. J., Schell, M. J., Katz, J. M., Kawaoka, Y., Naeve, C. W., Gorman, O. T., & Webster, R. G. (1992) · Journal of Virology · doi:10.1128/jvi.66.2.1129-1138.1992 · Cited by 231 · see citing works
Bush, R. M. (2001) · Nature Reviews Genetics · doi:10.1038/35072023 · Cited by 223 · see citing works
Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus
Nelson, M. I., Simonsen, L., Viboud, C. G., Miller, M. A., Taylor, J., George, K. S., Griesemer, S. B., Ghedin, E., Sengamalay, N. A., Spiro, D. J., et al. (2006) · PLoS Pathogens · doi:10.1371/journal.ppat.0020125 · Cited by 190 · see citing works
The phylogeography of human viruses
Holmes, E. C. (2003) · Molecular Ecology · doi:10.1046/j.1365-294x.2003.02051.x · Cited by 188 · see citing works
A statistical phylogeography of influenza A H5N1
Wallace, R. G., HoDac, H., Lathrop, R. H., & Fitch, W. M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0700435104 · Cited by 169 · see citing works
Quantifying influenza vaccine efficacy and antigenic distance
Gupta, V., Earl, D. J., & Deem, M. W. (2006) · Vaccine · doi:10.1016/j.vaccine.2006.01.010 · Cited by 169 · see citing works
Predicting Antigenic Variants of Influenza A/H3N2 Viruses
Lee, M., & Chen, J. S.-E. (2004) · Emerging infectious diseases · doi:10.3201/eid1008.040107 · Cited by 152 · see citing works
Influenza Epidemics in the United States, France, and Australia, 1972–19971
Viboud, C. G., Boëlle, P., Pakdaman, K., Carrat, F., Valleron, A., & Flahault, A. (2004) · Emerging infectious diseases · doi:10.3201/eid1001.020705 · Cited by 147 · see citing works
PREDICTING THE GLOBAL SPREAD OF NEW INFECTIOUS AGENTS
Longini, I. M., Fine, P., & Thacker, S. B. (1986) · American Journal of Epidemiology · doi:10.1093/oxfordjournals.aje.a114253 · Cited by 125 · see citing works
NATURALLY ACQUIRED IMMUNITY TO INFLUENZA TYPE A: A CLINICAL AND LABORATORY STUDY
Gill, P. W., & Murphy, A. M. (1976) · The Medical Journal of Australia · doi:10.5694/j.1326-5377.1976.tb130219.x · Cited by 112 · see citing works
Fleming, D., Zambon, M. C. F. A., Bartelds, A. I. M., & de Jong, J. C. (1999) · European Journal of Epidemiology · doi:10.1023/a:1007525402861 · Cited by 111 · see citing works
Population dynamics of rapid fixation in cytotoxic T lymphocyte escape mutants of influenza A
Gog, J. R., Rimmelzwaan, G. F., Osterhaus, A. D. M. E., & Grenfell, B. T. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1830296100 · Cited by 110 · see citing works
Epidemic dynamics and antigenic evolution in a single season of influenza A
Boni, M. F., Gog, J. R., Andreasen, V., & Feldman, M. W. (2006) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2006.3466 · Cited by 99 · see citing works
Self-citationInfluenza and the work of the World Health Organization
Kitler, M. E., Gavinio, P., & Lavanchy, D. (2002) · Vaccine · doi:10.1016/s0264-410x(02)00121-4 · Cited by 95 · see citing works
Influenza drift and epidemic size: the race between generating and escaping immunity
Boni, M. F., Gog, J. R., Andreasen, V., & Christiansen, F. (2003) · Theoretical Population Biology · doi:10.1016/j.tpb.2003.10.002 · Cited by 85 · see citing works
Self-citationInfluenza: Global surveillance for epidemic and pandemic variants
Cox, N. J., Brammer, T. L., & Regnery, H. L. (1994) · European Journal of Epidemiology · doi:10.1007/bf01719678 · Cited by 68 · see citing works
Laboratory-Based Surveillance and Molecular Epidemiology of Influenza Virus in Taiwan
Shih, S., Chen, G., Yang, C.-C., Yang, W.-Z., Liu, D., Lin, J., Chiu, S., Chen, H.-Y., Tsao, K., Huang, C., et al. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.4.1651-1661.2005 · Cited by 68 · see citing works
Sleigh, M. J., Both, G. W., Underwood, P. A., & Bender, V. (1981) · Journal of Virology · doi:10.1128/jvi.37.3.845-853.1981 · Cited by 60 · see citing works
Glezen, W. P., Couch, R. B., & Six, H. R. (1982) · American Journal of Epidemiology · doi:10.1093/oxfordjournals.aje.a113441 · Cited by 60 · see citing works
Antigenic drift and variability of influenza viruses
Schweiger, B., Zadow, I., & Heckler, R. (2002) · Medical Microbiology and Immunology · doi:10.1007/s00430-002-0132-3 · Cited by 59 · see citing works
The evolution of influenza surveillance in Europe and prospects for the next 10 years
Fleming, D. (2003) · Vaccine · doi:10.1016/s0264-410x(03)00066-5 · Cited by 52 · see citing works
Modelling antigenic drift in weekly flu incidence
Finkenstadt, B. F., Morton, A., & Rand, D. A. J. (2005) · Statistics in Medicine · doi:10.1002/sim.2196 · Cited by 42 · see citing works
Influenza virus antigens and ‘antigenic drift’
Hampson, A. W. (2002) · Perspectives in medical virology · doi:10.1016/s0168-7069(02)07004-0 · Cited by 39 · see citing works
Repeated influenza vaccination of healthy children and adults: borrow now, pay later?
Carrat, F., Lavenu, A., Cauchemez, S., & Deleger, S. (2005) · Epidemiology and Infection · doi:10.1017/s0950268805005479 · Cited by 30 · see citing works
Detailed analysis of the genetic evolution of influenza virus during the course of an epidemic
Lavenu, A., Leruez‐Ville, M., Chaix, M., Boëlle, P., Ranger‐Rogez, S., Freymuth, F., Hay, A. J., Rouzioux, C., & Carrat, F. (2005) · Epidemiology and Infection · doi:10.1017/s0950268805005686 · Cited by 27 · see citing works
An influenza A(H3) reassortant was epidemic in Australia and New Zealand in 2003
Barr, I., Komadina, N., Hurt, A. C., Iannello, P., Tomasov, C., Shaw, R., Durrant, C. J., Sjogren, H. M., & Hampson, A. W. (2005) · Journal of Medical Virology · doi:10.1002/jmv.20374 · Cited by 27 · see citing works
Coiras, M., Aguilar, J. C., Galiano, M., Carlos, S., Gregory, V., Lin, Y. P., Hay, A. J., & Pérez‐Breña, P. (2001) · Archives of Virology · doi:10.1007/s007050170025 · Cited by 19 · see citing works
Pyhälä, R., Visakorpi, R., Ikonen, N., & Kleemola, M. (2003) · Journal of Medical Virology · doi:10.1002/jmv.10552 · Cited by 9 · see citing works
Ikone, N., Pyhälä, R., Toivonen, M., & Korpela, H. (2005) · Archives of Virology · doi:10.1007/s00705-005-0635-5 · Cited by 6 · see citing works
Flagged first, then by citations
1 of the 48 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
mRNA vaccines for infectious diseases: principles, delivery and clinical translation
Chaudhary, N., Weissman, D., & Whitehead, K. A. (2021) · Nature Reviews Drug Discovery · doi:10.1038/s41573-021-00283-5 · Cited by 1,555 · see citing works
An Exact Nonparametric Method for Inferring Mosaic Structure in Sequence Triplets
Boni, M. F., Posada, D., & Feldman, M. W. (2007) · Genetics · doi:10.1534/genetics.106.068874 · Cited by 765 · see citing works
Self-citationExploitation of glycosylation in enveloped virus pathobiology
Watanabe, Y., Bowden, T. A., Wilson, I. A., & Crispin, M. (2019) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2019.05.012 · Cited by 485 · see citing works
Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus
Pu, J., Wang, S., Yin, Y., Zhang, G., Carter, R. A., Wang, J., Xu, G., Sun, H., Wang, M., Wen, C., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1422456112 · Cited by 371 · see citing works
Kwon, P. S., Ren, S., Kwon, S., Kizer, M. E., Kuo, L., Xie, M., Zhu, D., Zhou, F., Zhang, F., Kim, D., et al. (2019) · Nature Chemistry · doi:10.1038/s41557-019-0369-8 · Cited by 317 · see citing works
Nanoparticle-Based Vaccines Against Respiratory Viruses
Soultan, A. H., Gauthier, L., Arpin, D., Bourgault, S., & Archambault, D. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.00022 · Cited by 300 · see citing works
Viral shape-shifting: norovirus evasion of the human immune system
Donaldson, E., Lindesmith, L. C., LoBue, A. D., & Baric, R. S. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2296 · Cited by 276 · see citing works
Sullivan, S. J., Jacobson, R. M., Dowdle, W. R., & Poland, G. A. (2009) · Mayo Clinic Proceedings · doi:10.4065/mcp.2009.0588 · Cited by 228 · see citing works
An Overview of Influenza Viruses and Vaccines
Nuwarda, R. F., Alharbi, A. A., & Kayser, V. (2021) · Vaccines · doi:10.3390/vaccines9091032 · Cited by 185 · see citing works
The Evolution and Biology of SARS-CoV-2 VariantsPreprint
Telenti, A., Hodcroft, E. B., & Robertson, D. L. (2022) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a041390 · Cited by 183 · see citing works
Microbial antigenic variation mediated by homologous DNA recombination
Vink, C., Rudenko, G., & Seifert, H. S. (2011) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2011.00321.x · Cited by 136 · see citing works
Rates of SARS-CoV-2 transmission and vaccination impact the fate of vaccine-resistant strains
Rella, S. A., Kulikova, Y. A., Dermitzakis, E. T., & Kondrashov, F. A. (2021) · Scientific Reports · doi:10.1038/s41598-021-95025-3 · Cited by 136 · see citing works
Jackson, A. P., Otto, T. D., Darby, A. C., Ramaprasad, A., Xia, D., Echaide, I. E., Farber, M. D., Gahlot, S., Gamble, J. A., Gupta, D. K., et al. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku322 · Cited by 130 · see citing works
The Double-Edged Sword: How Evolution Can Make or Break a Live-Attenuated Virus Vaccine
Hanley, K. A. (2011) · Evolution Education and Outreach · doi:10.1007/s12052-011-0365-y · Cited by 125 · see citing works
Du, X., Dong, L., Lan, Y., Peng, Y., Wu, A., Zhang, Y., Huang, W., Wang, D., Wang, M., Guo, Y., et al. (2012) · Nature Communications · doi:10.1038/ncomms1710 · Cited by 115 · see citing works
Novel Inhibitor Design for Hemagglutinin against H1N1 Influenza Virus by Core Hopping Method
Li, X.-B., Wang, S., Xu, W., Wang, R., & Chou, K. (2011) · PLoS ONE · doi:10.1371/journal.pone.0028111 · Cited by 107 · see citing works
Budimir, N., Varga, S. M., Badovinac, V. P., & Harty, J. T. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.08.073 · Cited by 104 · see citing works
Okoli, G. N., Racovitan, F., Abdulwahid, T., Righolt, C. H., & Mahmud, S. M. (2021) · Vaccine · doi:10.1016/j.vaccine.2021.01.032 · Cited by 87 · see citing works
A Systematic Review of Recent Advances in Equine Influenza Vaccination
Paillot, R. (2014) · Vaccines · doi:10.3390/vaccines2040797 · Cited by 90 · see citing works
The local stability of a modified multi-strain SIR model for emerging viral strains
Fudolig, M. A., & Howard, R. (2020) · PLoS ONE · doi:10.1371/journal.pone.0243408 · Cited by 89 · see citing works
Chang, S., Huang, H.-J., & Chen, C. Y. (2011) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002315 · Cited by 83 · see citing works
RetractedGuidelines for Identifying Homologous Recombination Events in Influenza A Virus
Boni, M. F., de Jong, M. D., van Doorn, H. R., & Holmes, E. C. (2010) · PLoS ONE · doi:10.1371/journal.pone.0010434 · Cited by 82 · see citing works
Self-citationPerspectives on influenza evolution and the role of research
Forrest, H. L., & Webster, R. G. (2010) · Animal Health Research Reviews · doi:10.1017/s1466252310000071 · Cited by 81 · see citing works
Shu, B., Garten, R. J., Emery, S. L., Balish, A. L., Cooper, L. A., Sessions, W. M., Deyde, V., Smith, C., Berman, L., Klimov, A. I., et al. (2011) · Virology · doi:10.1016/j.virol.2011.10.016 · Cited by 81 · see citing works
Sun, Y., Pu, J., Fan, L., Sun, H., Wang, J., Zhang, Y., Liu, L., & Liu, J. (2011) · Veterinary Microbiology · doi:10.1016/j.vetmic.2011.10.003 · Cited by 75 · see citing works
Chen, J.-R., Yu, Y., Tseng, Y.-C., Chiang, W.-L., Chiang, M.-F., Ko, Y., Chiu, Y.-K., Ma, H., Wu, C., Jan, J., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1323954111 · Cited by 73 · see citing works
Advances in therapeutic applications of silver nanoparticles
Kaushal, A., Khurana, I., Yadav, P., Allawadhi, P., Banothu, A. K., Neeradi, D., Thalugula, S., Barani, P. J., Navik, U., Navik, U., et al. (2023) · Chemico-Biological Interactions · doi:10.1016/j.cbi.2023.110590 · Cited by 71 · see citing works
Breathing and Tilting: Mesoscale Simulations Illuminate Influenza Glycoprotein Vulnerabilities
Casalino, L., Seitz, C., Lederhofer, J., Tsybovsky, Y., Wilson, I. A., Kanekiyo, M., & Amaro, R. (2022) · ACS Central Science · doi:10.1021/acscentsci.2c00981 · Cited by 53 · see citing works
Dou, D., Hernández-Neuta, I., Wang, H., Østbye, H., Qian, X., Thiele, S., Resa‐Infante, P., Kouassi, N. M., Sender, V., Hentrich, K., et al. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.06.021 · Cited by 64 · see citing works
Richards, K. A., Chaves, F. A., & Sant, A. J. (2009) · Journal of Virology · doi:10.1128/jvi.00302-09 · Cited by 65 · see citing works
Pandemic preparedness through vaccine development for avian influenza viruses
Faccin, F. C., & Perez, D. R. (2024) · Human Vaccines & Immunotherapeutics · doi:10.1080/21645515.2024.2347019 · Cited by 60 · see citing works
Hervé, P., Raliou, M., Bourdieu, C., Dubuquoy, C., Petit‐Camurdan, A., Bertho, N., Eléouët, J., Chevalier, C., & Riffault, S. (2013) · Journal of Virology · doi:10.1128/jvi.01141-13 · Cited by 55 · see citing works
Conjunction of factors triggering waves of seasonal influenza
Chattopadhyay, I., Kıcıman, E., Elliott, J. W., Shaman, J. L., & Rzhetsky, A. (2018) · eLife · doi:10.7554/elife.30756 · Cited by 55 · see citing works
Vaccines in Veterinary Medicine: A Brief Review of History and Technology
McVey, S., & Shi, J. N. (2010) · Veterinary Clinics of North America Small Animal Practice · doi:10.1016/j.cvsm.2010.02.001 · Cited by 54 · see citing works
Darwinian interventions: taming pathogens through evolutionary ecology
Williams, P. D. (2009) · Trends in Parasitology · doi:10.1016/j.pt.2009.11.009 · Cited by 54 · see citing works
Pu, J., Yin, Y., Liu, J., Wang, X., Zhou, Y., Wang, Z., Sun, Y., Sun, H., Li, F., Song, J., et al. (2021) · Journal of Virology · doi:10.1128/jvi.01578-20 · Cited by 53 · see citing works
Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
Lycett, S., Baillie, G. J., Coulter, E., Bhatt, S., Kellam, P., McCauley, J. W., Wood, J. L. N., Brown, I. H., Pybus, O. G., & Brown, A. (2012) · Journal of General Virology · doi:10.1099/vir.0.044503-0 · Cited by 52 · see citing works
Universal influenza vaccines: from viruses to nanoparticles
Wang, Y., Deng, L., Kang, S., & Wang, B. (2018) · Expert Review of Vaccines · doi:10.1080/14760584.2018.1541408 · Cited by 49 · see citing works
Antibody specificity and promiscuity
Jain, D., & Salunke, D. M. (2019) · Biochemical Journal · doi:10.1042/bcj20180670 · Cited by 47 · see citing works
Wei, Y., Xu, G., Zhang, G., Wen, C., Anwar, F., Wang, S., Lemmon, G., Wang, J., Carter, R., Wang, M., et al. (2015) · Veterinary Microbiology · doi:10.1016/j.vetmic.2015.10.031 · Cited by 47 · see citing works
Structure and Mutations of SARS-CoV-2 Spike Protein: A Focused Overview
Mehra, R., & Kepp, K. P. (2021) · ACS Infectious Diseases · doi:10.1021/acsinfecdis.1c00433 · Cited by 45 · see citing works
Haolla, F. A., Claser, C., de Alencar, B. C., Tzelepis, F., Vasconcelos, J. R., de Oliveira, G., Silvério, J. C., Machado, A. V., Lannes-Vieira, J., Bruña–Romero, O., et al. (2009) · Vaccine · doi:10.1016/j.vaccine.2009.07.013 · Cited by 44 · see citing works
Saha, A., Roy, S. G., Dwivedi, R., Tripathi, P., Kumar, K., Nambiar, S. M., & Pathak, R. (2025) · Vaccines · doi:10.3390/vaccines13040424 · Cited by 44 · see citing works
Response of Gray Foxes to Modified Live-Virus Canine Distemper Vaccines
Halbrooks, R. D., Swango, L. J., Schnurrenberger, P. R., Mitchell, F. E., & Hill, E. P. (1981) · Journal of the American Veterinary Medical Association · doi:10.2460/javma.1981.179.11.1170 · Cited by 42 · see citing works
Gado, A. R., Ellakany, H. F., Elbestawy, A. R., El-Hack, M. E. A., Khafaga, A. F., Taha, A. E.-S., Arif, M. A., & Mahgoub, S. A. (2019) · Annals of Animal Science · doi:10.2478/aoas-2019-0043 · Cited by 40 · see citing works
Abdelwhab, E. M., & Hafez, H. (2012) · Viruses · doi:10.3390/v4113179 · Cited by 40 · see citing works
Kao, C., Chan, T., Tsai, C.-H., Chu, K.-Y., Chuang, S.-F., Lee, C., Li, Z.-R. T., Wu, K.-W., Chang, L., Shen, Y.-H., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0031162 · Cited by 38 · see citing works
Viral evolution and transmission effectiveness
Rodpothong, P. (2012) · World Journal of Virology · doi:10.5501/wjv.v1.i5.131 · Cited by 38 · see citing works
OpenFluDB, a database for human and animal influenza virus
Liechti, R., Gleizes, A., Kuznetsov, D. A., Bougueleret, L., Mercier, P. L., Bairoch, A., & Xénarios, I. (2010) · Database · doi:10.1093/database/baq004 · Cited by 38 · see citing works
Hervé, P., Lorin, V., Jouvion, G., Costa, B. D., & Escriou, N. (2015) · Virology · doi:10.1016/j.virol.2015.08.033 · Cited by 36 · see citing works
Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses
Ryt‐Hansen, P., Pedersen, A. G., Larsen, I., Kristensen, C. S., Krog, J. S., Wacheck, S., & Larsen, L. E. (2020) · Viruses · doi:10.3390/v12020248 · Cited by 35 · see citing works
Chen, N., Li, L., Han, Y., & Chen, Z. (2025) · Journal of Inflammation Research · doi:10.2147/jir.s525880 · Cited by 33 · see citing works
Madore, D. V., Meade, B. D., Rubin, F. A., Deal, C. D., & Lynn, F. (2010) · Vaccine · doi:10.1016/j.vaccine.2010.04.094 · Cited by 33 · see citing works
Zhan, W., Muhuri, M., Tai, P. W. L., & Gao, G. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.673699 · Cited by 33 · see citing works
Influenza vaccine: a review on current scenario and future prospects
Gupta, D., & Mohan, S. (2023) · Journal of Genetic Engineering and Biotechnology · doi:10.1186/s43141-023-00581-y · Cited by 32 · see citing works
Datta, S. (2020) · ChemRxiv · doi:10.26434/chemrxiv.13102877 · Cited by 31 · see citing works
Richards, K. A., Chaves, F. A., & Sant, A. J. (2011) · Immunology · doi:10.1111/j.1365-2567.2011.03435.x · Cited by 31 · see citing works
Dabaghian, M., Latifi, A. M., Tebianian, M., Nili, H., Ranjbar, A. R. T., Mirjalili, A., Mohammadi, M., Banihashemi, R., & Ebrahimi, S. M. (2014) · Veterinary Microbiology · doi:10.1016/j.vetmic.2014.09.009 · Cited by 31 · see citing works
CAF01 Potentiates Immune Responses and Efficacy of an Inactivated Influenza Vaccine in Ferrets
Martel, C. J., Agger, E. M., Poulsen, J. J., Jensen, T. H., Andresen, L. O., Christensen, D., Nielsen, L. P., Blixenkrone-Møller, M., Andersen, P. L., & Aasted, B. (2011) · PLoS ONE · doi:10.1371/journal.pone.0022891 · Cited by 30 · see citing works
Forghani, M., & Khachay, M. (2020) · Viruses · doi:10.3390/v12091019 · Cited by 29 · see citing works
Age profile of immunity to influenza: Effect of original antigenic sin
Kucharski, A. J., & Gog, J. R. (2011) · Theoretical Population Biology · doi:10.1016/j.tpb.2011.12.006 · Cited by 28 · see citing works
Subramanian, R., Graham, A. L., Grenfell, B. T., & Arinaminpathy, N. (2016) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1005204 · Cited by 28 · see citing works
Passage Adaptation Correlates With the Reduced Efficacy of the Influenza Vaccine
Chen, H., Alvarez, J. J. S., Ng, S. H., Nielsen, R., & Zhai, W. (2018) · Clinical Infectious Diseases · doi:10.1093/cid/ciy1065 · Cited by 27 · see citing works
Pascual, E., Mata, C. P., Gómez-Blanco, J., Moreno, N., Bárcena, J., Blanco, E., Rodríguez-Frandsen, A., Nieto, A., Carrascosa, J. L., & Castón, J. R. (2014) · Journal of Virology · doi:10.1128/jvi.03025-14 · Cited by 27 · see citing works
Wu, F., Yuan, X., Huang, W., & Chen, Y. (2008) · Vaccine · doi:10.1016/j.vaccine.2008.11.037 · Cited by 26 · see citing works
1918 Grip Pandemisi Kıssasından COVID-19 Pandemisine Hisseler
TEMEL, M. K., & Ertin, H. (2020) · Anadolu Kliniği Tıp Bilimleri Dergisi · doi:10.21673/anadoluklin.716868 · Cited by 24 · see citing works
Poelvoorde, L. A. E. V., Delcourt, T., Coucke, W., Herman, P., Keersmaecker, S. C. J. D., Saelens, X., Roosens, N. H. C., & Vanneste, K. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.747458 · Cited by 26 · see citing works
Kucharski, A. J., & Gog, J. R. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002741 · Cited by 26 · see citing works
Okoli, G. N., Racovitan, F., Abdulwahid, T., Hyder, S. K., Lansbury, L., Righolt, C. H., Mahmud, S. M., & Nguyen‐Van‐Tam, J. S. (2021) · Open Forum Infectious Diseases · doi:10.1093/ofid/ofab069 · Cited by 27 · see citing works
Trafficking and retention of protein antigens across systems and immune cell types
Doan, T. A., Forward, T. S., & Tamburini, B. A. J. (2022) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-022-04303-4 · Cited by 24 · see citing works
Vaccine Strategies Against RNA Viruses: Current Advances and Future Directions
Hsiung, K. C., Chiang, H.-J., Reinig, S., & Shih, S. (2024) · Vaccines · doi:10.3390/vaccines12121345 · Cited by 25 · see citing works
Tomás, G., Marandino, A. E., Courtillon, C., Amelot, M., Keïta, A., Pikuła, A., Hernández, M. A., Hernández, D., Vagnozzi, A. E., Panzera, Y., et al. (2019) · Avian Pathology · doi:10.1080/03079457.2019.1572867 · Cited by 24 · see citing works
Timing of Pathogen Adaptation to a Multicomponent Treatment
Bourget, R., Chaumont, L., & Sapoukhina, N. (2013) · PLoS ONE · doi:10.1371/journal.pone.0071926 · Cited by 23 · see citing works
Luo, S., & Koelle, K. (2013) · The American Naturalist · doi:10.1086/669952 · Cited by 21 · see citing works
Khandaker, I., Suzuki, A. K., Kamigaki, T., Tohma, K., Odagiri, T., Okada, T., Ohno, A., Otani, K., Sawayama, R., Kawamura, K., et al. (2013) · Virus Genes · doi:10.1007/s11262-013-0980-5 · Cited by 21 · see citing works
Alexander, M. E., & Kobes, R. (2011) · BMC Public Health · doi:10.1186/1471-2458-11-s1-s8 · Cited by 21 · see citing works
Development of mRNA vaccines and their prophylactic and therapeutic applications
Lee, K., Kim, M., Seo, Y., & Lee, H. (2018) · Nano Research · doi:10.1007/s12274-018-2095-8 · Cited by 21 · see citing works
Mix, M. R., van de Wall, S., Heidarian, M., Escue, E., Fain, C. E., Pewe, L. L., Hancox, L. S., Arumugam, S. A., Sievers, C. M., Badovinac, V. P., et al. (2025) · Cell Reports · doi:10.1016/j.celrep.2025.115247 · Cited by 18 · see citing works
Effect of seasonal vaccination on the selection of influenza A/H3N2 epidemic variants
Chong, Y., & Ikematsu, H. (2016) · Vaccine · doi:10.1016/j.vaccine.2016.11.084 · Cited by 17 · see citing works
Fougerolle, S., Legrand, L. J., Garrett, D., Birand, I., Foursin, M., D'Ablon, X., Bayssat, P., Newton, R. J., Pronost, S. L., & Paillot, R. (2016) · Vaccine · doi:10.1016/j.vaccine.2016.05.068 · Cited by 17 · see citing works
Abbadi, N., & Mousa, J. J. (2023) · Viruses · doi:10.3390/v15010200 · Cited by 16 · see citing works
Jung, S.-M., Loo, S. L., Howerton, E., Contamin, L., Smith, C. P., Carcelén, E. C., Yan, K., Bents, S. J., Levander, J. D., Espino, J. U., et al. (2024) · PLoS Medicine · doi:10.1371/journal.pmed.1004387 · Cited by 15 · see citing works
Xu, Z., Song, J. H., Zhang, H., Wei, Z., Wei, D., Guangyu, Y., Jacques Demongeot, A., & Zeng, Q. (2024) · Scientific Reports · doi:10.1038/s41598-024-74221-x · Cited by 15 · see citing works
The Perspective on Bio-Nano Interface Technology for Covid-19
Kamaraj, S. (2020) · Frontiers in Nanotechnology · doi:10.3389/fnano.2020.586250 · Cited by 15 · see citing works
Optimal Design of the Seasonal Influenza Vaccine with Manufacturing Autonomy
Özaltın, O. Y., Prokopyev, O. A., & Schaefer, A. J. (2018) · INFORMS journal on computing · doi:10.1287/ijoc.2017.0786 · Cited by 15 · see citing works
Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Ma, Y., Zhang, Y., Zhang, Y., Li, Z., Chen, Q., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-51770-3 · Cited by 13 · see citing works
Boonnak, K., Mansanguan, C., Schuerch, D., Boonyuen, U., Lerdsamran, H., Jiamsomboon, K., Wang, F. S., Huntrup, A., Prasertsopon, J., Kosoltanapiwat, N., et al. (2021) · Viruses · doi:10.3390/v13060977 · Cited by 14 · see citing works
Xu, P., Yang, Z., Du, S., Hong, Z., & Zhong, S. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.1035941 · Cited by 14 · see citing works
Statistical identifiability and sample size calculations for serial seroepidemiology
Vinh, D. N., & Boni, M. F. (2015) · Epidemics · doi:10.1016/j.epidem.2015.02.005 · Cited by 14 · see citing works
Self-citationGenotypic evolution and antigenicity of H9N2 influenza viruses in Shanghai, China
Ge, F., Li, X., Ju, H., Yang, D., Liu, J., Qi, X., Wang, J., Yang, X., Qiu, Y., Liu, P., et al. (2016) · Archives of Virology · doi:10.1007/s00705-016-2767-1 · Cited by 14 · see citing works
CD8+ T-cell responses towards conserved influenza B virus epitopes across anatomical sites and age
Menon, T., Illing, P. T., Chaurasia, P., McQuilten, H. A., Shepherd, C. M., Rowntree, L. C., Petersen, J., Littler, D. R., Khuu, G., Huang, Z., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-47576-y · Cited by 13 · see citing works
Akingbola, A., Christopher, A. A., Adegoke, K., Idahor, C. O., Mariaria, P. K., Peters, F., Salami, R. A., Ojo, O., Nwaeze, E., Abdullahi, O., et al. (2025) · npj Vaccines · doi:10.1038/s41541-025-01145-6 · Cited by 13 · see citing works
RetractedAn Antigenic Thrift-Based Approach to Influenza Vaccine Design
Bolton, J. S., Klim, H., Wellens, J., Edmans, M. D., Obolski, U., & Thompson, C. (2021) · Vaccines · doi:10.3390/vaccines9060657 · Cited by 13 · see citing works
A Review on Equine Influenza from a Human Influenza Perspective
Whitlock, F., Murcia, P. R., & Newton, J. R. (2022) · Viruses · doi:10.3390/v14061312 · Cited by 13 · see citing works
Torner, N., Martı́nez, A., Basile, L., Marcos, M. Á., Antón, A., Mosquera, M., Isanta, R., Cabezas, C., Jané, M., Domı́nguez, Á., et al. (2014) · Human Vaccines & Immunotherapeutics · doi:10.4161/hv.36155 · Cited by 13 · see citing works
Yuan, H., & Koelle, K. (2013) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2012.0204 · Cited by 13 · see citing works
Islam, S. R., Prusty, D., & Manna, S. K. (2021) · medRxiv · doi:10.1101/2021.01.28.21250666 · Cited by 13 · see citing works
Lung cell fates during influenza
Jarboe, B., Shubina, M., Langlois, R. A., Boyd, D. F., & Balachandran, S. (2025) · Cell Research · doi:10.1038/s41422-025-01163-y · Cited by 14 · see citing works
Martin, M. A., Berg, N., & Koelle, K. (2024) · Virus Evolution · doi:10.1093/ve/veae042 · Cited by 12 · see citing works
Antigenicity and transmissibility of a novel clade 2.3.2.1 avian influenza H5N1 virus
Xu, L., Bao, L., Yuan, J., Li, F., Lv, Q., Deng, W., Xu, Y., Yao, Y., Yü, P., Chen, H., et al. (2013) · Journal of General Virology · doi:10.1099/vir.0.057778-0 · Cited by 12 · see citing works
- Authors
- Boni, M. F.
- Affiliations
- Resources For The Future (US)
- Corresponding author
- Boni, Maciej F.
- ORCID
- Boni, Maciej F.
- Venue
- Vaccine
- Publisher
- Elsevier BV
- Published
- 2008-07
- Volume
- 26
- Pages
- C8-C14
- ISSN
- 0264-410X (ISSN-L)
- PMC
- PMC2603026
- OpenAlex
- W2023224232
- Cited by
- 226
- References
- 48
- Citations by year
- 2026: 11 · 2025: 13 · 2024: 13 · 2023: 8 · 2022: 14 · 2021: 47 · 2020: 19 · 2019: 9 · 2018: 10 · 2017: 8 · 2016: 9 · 2015: 4 · 2014: 8 · 2013: 10 · 2012: 8
- FWCI
- 1.18
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Vaccine (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institutes of Health
- National Human Genome Research Institute (F32HG000205, HG000205, P01HG000205)
- National Institute of General Medical Sciences (GM28016, R01GM028016)
- Topics
- Health Sciences › Medicine › Epidemiology › Influenza Virus Research Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Health Sciences › Medicine › Epidemiology › Respiratory viral infections research
- Keywords
- influenza vaccination, seasonal influenza, herd immunity, vaccine update, vaccine selection
- MeSH terms
- Antigenic Variation, Biological Evolution, Humans, Influenza, Human, Influenza Vaccines, Vaccination, Virulence, Genetic Drift, Influenza A Virus, H1N1 Subtype, Influenza A Virus, H3N2 Subtype
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