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[1] Measurement of absolute oxygen levels in cells and tissues using oxygen sensors and 2-nitroimidazole EF5
Abstract
We have established basic methods, using quantitative measures of EF5 binding, to estimate the actual pO2 of cells and tissues. In situations where the tissue can be dissociated into single cells, or for cell cultures, we can measure the distribution of cellular binding rates using flow cytometry and these can be compared with cells treated under pO2S controlled by the spinner vial or thin-film methods in vitro. The flow cytometer is calibrated by staining V79 cells treated with EF5 under "standard" conditions. For intact tissues treated with EF5 in vivo, we need to correct for possible variations in drug exposure (AUC). Frozen sections are stained for EF5 binding and are analyzed by a sensitive (cooled) CCD camera with linear output vs fluorescence [figure: see text] input. The camera has very consistent sensitivity, but the entire optical system, including the camera, can be calibrated by an absolute fluorescence standard (dye in hemocytometer). This system can also be used to measure the fluorescence of the flow cytometer standards, providing a direct link between the two assays. We can measure the maximum binding rate using the tissue cube method, but need to assume an "average" oxygen dependence of binding for intact tissues. The best-fit approximation for existing data is an inverse relationship between binding and pO2, with binding decreasing 50-fold between 0.1 and 10% oxygen. Using these methods, we routinely estimate the minimum pO2 (maximum binding) in experimental rodent and human tumors. In normal tissue models, an excellent correlation is found between near-maximal binding (severe hypoxia) and apoptosis (heart infarct and ductus arteriosus). Some normal tissues (e.g., skeletal muscle) are refractory to both cellular disaggregation and cube calibration methods. To extend the tissue imaging measurements to a complete two- or three-dimensional analysis of the distribution of tissue pO2s requires a substantial additional investment of imaging methods, which are currently being implemented.
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“the gut, which is known to be relatively hypoxic under physiologic conditions (Koch, 2002)”
From Control of TH17/Treg Balance by Hypoxia-Inducible Factor 1 (2011) · cites this paper as Koch, 2002
In the citing paper
“the lamina propria of the gut, which, as indicated above (Koch, 2002), is relatively hypoxic”
From Control of TH17/Treg Balance by Hypoxia-Inducible Factor 1 (2011) · cites this paper as Koch, 2002
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Dyer, L. A., Lawrence, D., Karunamuni, G. H., Wikenheiser, J. C., Doughman, Y., Visconti, R. P., Burch, J. B. E., & Watanabe, M. (2006) · Developmental Dynamics · doi:10.1002/dvdy.20885 · Cited by 49
Role of myocardial hypoxia in the remodeling of the embryonic avian cardiac outflow tract
Sugishita, Y., Watanabe, M., & Fisher, S. A. (2003) · Developmental Biology · doi:10.1016/j.ydbio.2003.11.017 · Cited by 49
Evans, S. M., Jenkins, K. W., Chen, H. I., Jenkins, W. T., Judy, K. D., Hwang, W., Lustig, R. A., Judkins, A. R., Gradyt, M. S., Hahn, S. M., et al. (2010) · Translational Oncology · doi:10.1593/tlo.09265 · Cited by 47
Self-citationRepeatability of tumour hypoxia imaging using [18F]EF5 PET/CT in head and neck cancer
Silvoniemi, A., Suilamo, S., Laitinen, T., Forsback, S. J., Löyttyniemi, E., Vaittinen, S., Saunavaara, V., Solin, O. H., Grönroos, T. J., & Minn, H. R. I. (2017) · European Journal of Nuclear Medicine and Molecular Imaging · doi:10.1007/s00259-017-3857-3 · Cited by 47
Micro-engineering and nano-engineering approaches to investigate tumour ecosystems
Kim, M., Panagiotakopoulou, M., Chen, C., Ruiz, S. B., Ganesh, K., Tammela, T., & Heller, D. A. (2023) · Nature reviews. Cancer · doi:10.1038/s41568-023-00593-3 · Cited by 49
Optimizing Hypoxia Detection and Treatment Strategies
Koch, C. J., & Evans, S. M. (2015) · Seminars in Nuclear Medicine · doi:10.1053/j.semnuclmed.2014.10.004 · Cited by 47
Self-citationIn situ oxygen utilization in the rat intervertebral disc
Lee, D. C., Adams, C. S., Albert, T. J., Shapiro, I. M., Evans, S. M., & Koch, C. J. (2007) · Journal of Anatomy · doi:10.1111/j.1469-7580.2007.00692.x · Cited by 46
Self-citationJanczy-Cempa, E., Mazuryk, O., Kania, A., & Brindell, M. (2022) · Cancers · doi:10.3390/cancers14112686 · Cited by 46
Oxygen and seizure dynamics: I. Experiments
Ingram, J., Zhang, C., Cressman, J. R., Hazra, A., Wei, Y., Koo, Y.-E. L., Žiburkus, J., Kopelman, R., Xu, J., & Schiff, S. J. (2014) · Journal of Neurophysiology · doi:10.1152/jn.00540.2013 · Cited by 44
Lohse, I., Rasowski, J., Cao, P. M., Pintilie, M., Do, T., Tsao, M., Hill, R. P., & Hedley, D. W. (2016) · Oncotarget · doi:10.18632/oncotarget.9654 · Cited by 44
Altered hypoxia‐inducible factor‐1 alpha expression levels correlate with coronary vessel anomalies
Wikenheiser, J. C., Wolfram, J. A., Gargesha, M., Yang, K., Karunamuni, G. H., Wilson, D. L., Semenza, G. L., Agani, F. H., Fisher, S. A., Ward, N. L., et al. (2009) · Developmental Dynamics · doi:10.1002/dvdy.22089 · Cited by 43
Lao, Z., Kelly, M., Yang, X.-Y., Jenkins, W. T., Toorens, E., Ganguly, T., Evans, S. M., & Koch, C. J. (2015) · PLoS ONE · doi:10.1371/journal.pone.0133895 · Cited by 44
Self-citationFRET excited ratiometric oxygen sensing in living tissue
Ingram, J., Zhang, C., Xu, J., & Schiff, S. J. (2013) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2013.01.002 · Cited by 41
Koch, C. J. (2008) · Radiation Research · doi:10.1667/rr1305.1 · Cited by 41
Self-citationJang, T., Calaoagan, J. M., Kwon, E. E., Samuelsson, S. J., Recht, L. D., & Laderoute, K. R. (2010) · International Journal of Cancer · doi:10.1002/ijc.25558 · Cited by 39
Wang, J., Guise, C. P., Dachs, G. U., Phung, Y., Hsu, A., Lambie, N., Patterson, A. V., & Wilson, W. R. (2014) · Biochemical Pharmacology · doi:10.1016/j.bcp.2014.08.003 · Cited by 37
The scar neovasculature after myocardial infarction in rats
Wang, B., Ansari, R., Sun, Y., Postlethwaite, A. E., Weber, K. T., & Kiani, M. F. (2005) · American Journal of Physiology-Heart and Circulatory Physiology · doi:10.1152/ajpheart.00001.2005 · Cited by 37
Murthy, A., Gerber, S. A., Koch, C. J., & Lord, E. M. (2019) · ImmunoHorizons · doi:10.4049/immunohorizons.1900017 · Cited by 36
Self-citationFeldman, L. A., Fabre, M.-S., Grasso, C., Reid, D., Broaddus, W. C., Lanza, G. M., Spiess, B. D., Garbow, J. R., McConnell, M. J., & Herst, P. M. (2017) · PLoS ONE · doi:10.1371/journal.pone.0184250 · Cited by 35
Slyke, A. L. V., Khatib, M. E., Velalopoulou, A. P., Diffenderfer, E. S., Shoniyozov, K., Kim, M. M., Karagounis, I. V., Busch, T. M., Vinogradov, S. A., Koch, C. J., et al. (2022) · Radiation Research · doi:10.1667/rade-21-00232.1 · Cited by 36
Self-citationScott, A., Powner, M. B., & Fruttiger, M. (2014) · Experimental Eye Research · doi:10.1016/j.exer.2013.12.020 · Cited by 35
Rajapakse, A., & Gates, K. S. (2012) · The Journal of Organic Chemistry · doi:10.1021/jo3004748 · Cited by 34
Metadata
- Authors
- Koch, C. J.
- Affiliations
- University of Pennsylvania (US)
- Corresponding author
- Koch, Cameron J.
- Venue
- Methods in Enzymology
- Publisher
- Elsevier
- Published
- 2002
- Volume
- 352
- Pages
- 3-31
- ISSN
- 0076-6879 (ISSN-L)
- OpenAlex
- W1554643012
- Cited by
- 207
- References
- 78
- Citations by year
- 2026: 4 · 2025: 5 · 2024: 3 · 2023: 8 · 2022: 6 · 2021: 5 · 2020: 7 · 2019: 8 · 2018: 8 · 2017: 4 · 2016: 13 · 2015: 10 · 2014: 10 · 2013: 6 · 2012: 7
- FWCI
- 25.02
- Type
- book chapter
- Language
- en
- Open access
- closed
- Locations
- Methods in enzymology on CD-ROM/Methods in enzymology (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Hypoxia, and Metabolism
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Optical Imaging and Spectroscopy Techniques
- Physical Sciences › Chemistry › Analytical Chemistry › Analytical Chemistry and Sensors
- Keywords
- EF5, 2-nitroimidazole, tissue oxygenation, oxygen sensors, hypoxia, apoptosis, flow cytometry, tissue dissociation, fluorescence imaging, tumor oxygenation, V79 cells, ductus arteriosus, skeletal muscle
- MeSH terms
- Animals, Hypoxia, Biochemistry, Flow Cytometry, Fluorocarbons, Humans, Hydrocarbons, Fluorinated, Immunohistochemistry, Neoplasms, Oxygen, Pressure, Time Factors, Etanidazole, Mice
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