Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 426

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

SR Splicing Factors Serve as Adapter Proteins for TAP-Dependent mRNA Export

Huang, Yingqun, Gattoni, Renata, Stévenin, James, Steitz, Joan A.·2003·Molecular Cell

Abstract

The only mammalian RNA binding adapter proteins known to partner with TAP/NXF1, the primary receptor for general mRNA export, are members of the REF family. We demonstrate that at least three shuttling SR (serine/arginine-rich) proteins interact with the same domain of TAP/NXF1 that binds REFs. Included are 9G8 and SRp20, previously shown to promote the export of intronless RNAs. A peptide derived from the N terminus of 9G8 inhibits the binding of both REF and SR proteins to TAP/NXF1 in vitro, and this finding argues for competitive interactions. In Xenopus oocytes, the N terminus of 9G8 exhibits a dominant-negative effect on mRNA export from the nucleus, while addition of excess TAP/NXF1 overcomes this inhibition. Thus, multiple adapters including SR proteins most likely cooperate to recruit multiple copies of TAP/NXF1 for efficient mRNA export.

Overview

Integrity signals

Registry

Crossref · 10.1016/s1097-2765(03)00089-3

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

Research works printed but not linked: 45

  1. Bachi, 2000, The C-terminal domain of TAP interacts with the nuclear pore complex and promotes export of specific CTE-bearing RNA substrates, RNA, 6, 136, 10.1017/S1355838200991994 · DOI
  2. Braun, 2001, Overexpression of TAP/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export, J. Biol. Chem., 276, 20536, 10.1074/jbc.M100400200 · DOI
  3. Bray, 1994, A small element from the Mason-Pfizer monkey virus genome makes human immunodeficiency virus type 1 expression and replication Rev-independent, Proc. Natl. Acad. Sci. USA, 91, 1256, 10.1073/pnas.91.4.1256 · DOI · Paper page
  4. Brennan, 2000, Protein ligands to HuR modulate its interaction with target mRNAs in vivo, J. Cell Biol., 151, 1, 10.1083/jcb.151.1.1 · DOI
  5. Cáceres, 1993, Functional analysis of pre-mRNA splicing factor SF2/ASF structural domains, EMBO J., 12, 4715, 10.1002/j.1460-2075.1993.tb06160.x · DOI
  6. Cáceres, 1998, A specific subset of SR proteins shuttles continuously between the nucleus and the cytoplasm, Genes Dev., 12, 55, 10.1101/gad.12.1.55 · DOI
  7. Cavaloc, 1994, Characterization and cloning of the human splicing factor 9G8: a novel 35 kDa factor of the serine/arginine protein family, EMBO J., 13, 2639, 10.1002/j.1460-2075.1994.tb06554.x · DOI
  8. Cavaloc, 1999, The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers, RNA, 5, 468, 10.1017/S1355838299981967 · DOI
  9. Cazalla, 2002, Nuclear export and retention signals in the RS domain of SR proteins, Mol. Cell. Biol., 22, 6871, 10.1128/MCB.22.19.6871-6882.2002 · DOI
  10. Cramer, 1999, Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer, Mol. Cell, 4, 251, 10.1016/S1097-2765(00)80372-X · DOI
  11. Dignam, 1983, Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei, Nucleic Acids Res., 11, 1475, 10.1093/nar/11.5.1475 · DOI
  12. Fan, 1998, HNS, a nuclear-cytoplasmic shuttling sequence in HuR, Proc. Natl. Acad. Sci. USA, 95, 15293, 10.1073/pnas.95.26.15293 · DOI
  13. Fleckner, 1997, U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction, Genes Dev., 11, 1864, 10.1101/gad.11.14.1864 · DOI
  14. Gallouzi, 2001, Delineation of mRNA export pathways by the use of cell-permeable peptides, Science, 294, 1895, 10.1126/science.1064693 · DOI
  15. Gatfield, 2002, REF1/Aly and the additional exon junction complex proteins are dispensible for nuclear mRNA export, J. Cell Biol., 159, 579, 10.1083/jcb.200207128 · DOI
  16. Gatfield, 2001, The DExH/D box protein HEL/UAP56 is essential for mRNA nuclear export in Drosophila, Curr. Biol., 11, 1716, 10.1016/S0960-9822(01)00532-2 · DOI
  17. Graveley, 2000, Sorting out the complexity of SR protein functions, RNA, 6, 1197, 10.1017/S1355838200000960 · DOI
  18. Grüter, 1998, TAP, the human homolog of Mex67p, mediates CTE-dependent RNA export from the nucleus, Mol. Cell, 1, 649, 10.1016/S1097-2765(00)80065-9 · DOI · Paper page
  19. Guzik, 2001, NXT1 (p15) is a crucial cellular cofactor in TAP-dependent export of intron-containing RNA in mammalian cells, Mol. Cell. Biol., 21, 2545, 10.1128/MCB.21.7.2545-2554.2001 · DOI
  20. Huang, 2001, Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA, Mol. Cell, 7, 899, 10.1016/S1097-2765(01)00233-7 · DOI
  21. Huang, 1999, Intronless mRNA transport elements may affect multiple steps of pre-mRNA processing, EMBO J., 18, 1642, 10.1093/emboj/18.6.1642 · DOI
  22. Izaurralde, 2002, Nuclear export of messenger RNA, Results Probl. Cell Differ., 35, 133, 10.1007/978-3-540-44603-3_7 · DOI
  23. Jarmolowski, 1994, Nuclear export of different classes of RNA is mediated by specific factors, J. Cell Biol., 124, 627, 10.1083/jcb.124.5.627 · DOI
  24. Jensen, 2001, The DECD box putative ATPase Sub2p is an early mRNA export factor, Curr. Biol., 11, 1711, 10.1016/S0960-9822(01)00529-2 · DOI
  25. Kang, 1999, The human Tap protein is a nuclear mRNA export factor that contains novel RNA-binding and nucleocytoplasmic transport sequences, Genes Dev., 13, 1126, 10.1101/gad.13.9.1126 · DOI
  26. Katahira, 1999, The Mex67p-mediated nuclear mRNA export pathway is conserved from yeast to human, EMBO J., 18, 2593, 10.1093/emboj/18.9.2593 · DOI
  27. Kim, 2001, Role of the nonsense-mediated decay factor hUpf3 in the splicing-dependent exon-exon junction complex, Science, 293, 1832, 10.1126/science.1062829 · DOI
  28. Kim, 2001, The Y14 protein communicates to the cytoplasm the position of exon-exon junctions, EMBO J., 20, 2062, 10.1093/emboj/20.8.2062 · DOI
  29. Kistler, 2001, Deletion of MUD2, the yeast homolog of U2AF65, can bypass the requirement of Sub2, an essential spliceosomal ATPase, Genes Dev., 15, 42, 10.1101/gad.851301 · DOI
  30. Koizumi, 1999, The subcellular localization of SF2/ASF is regulated by direct interaction with SR protein kinases (SRPKs), J. Biol. Chem., 274, 11125, 10.1074/jbc.274.16.11125 · DOI
  31. Le Hir, 2000, The spliceosome deposits multiple proteins 20–24 nucleotides upstream of mRNA exon-exon junctions, EMBO J., 19, 6860, 10.1093/emboj/19.24.6860 · DOI
  32. Le Hir, 2001, The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay, EMBO J., 20, 4987, 10.1093/emboj/20.17.4987 · DOI
  33. Lei, 2002, Protein and RNA export from the nucleus, Dev. Cell, 2, 261, 10.1016/S1534-5807(02)00134-X · DOI
  34. Luo, 2001, Pre-mRNA splicing and mRNA export linked by direct interactions between UAP56 and Aly, Nature (Lond.), 413, 644, 10.1038/35098106 · DOI
  35. Lykke-Andersen, 2001, Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1, Science, 293, 1836, 10.1126/science.1062786 · DOI
  36. Ohno, 2002, Identity elements used in export of mRNAs, Mol. Cell, 9, 659, 10.1016/S1097-2765(02)00454-9 · DOI
  37. Piñol-Roma, 1992, Shuttling of pre-mRNA binding proteins between nucleus and cytoplasm, Nature, 355, 730, 10.1038/355730a0 · DOI
  38. Pollard, 1996, A novel receptor-mediated nuclear protein import pathway, Cell, 86, 985, 10.1016/S0092-8674(00)80173-7 · DOI
  39. Reichert, 2002, 5′ exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly, Genes Dev., 16, 2778, 10.1101/gad.1030602 · DOI
  40. Rodrigues, 2001, REF proteins mediate the export of spliced and unspliced mRNAs from the nucleus, Proc. Natl. Acad. Sci. USA, 98, 1030, 10.1073/pnas.98.3.1030 · DOI
  41. Sanford, 2001, Regulation of SR protein localization during development, Proc. Natl. Acad. Sci. USA, 98, 10184, 10.1073/pnas.181340498 · DOI
  42. Straesser, 2000, Yrap1, a conserved nuclear RNA-binding protein, interacts directly with Mex67p and is required for mRNA export, EMBO J., 19, 410, 10.1093/emboj/19.3.410 · DOI
  43. Straesser, 2001, Splicing factor Sub2p is required for nuclear mRNA export through its interaction with Yra1p, Nature (Lond.), 413, 648, 10.1038/35098113 · DOI
  44. Stutz, 2000, REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export, RNA, 6, 638, 10.1017/S1355838200000078 · DOI
  45. Zhou, 2000, The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans, Nature, 407, 401, 10.1038/35030160 · DOI

Cited by

See all 426

Metadata

Authors
Huang, Y., Gattoni, R., Stévenin, J., & Steitz, J. A.
Venue
Molecular Cell
Publisher
Elsevier BV
Published
2003-03
Volume
11
Issue
3
Pages
837-843
ISSN
1097-2765
Cited by
426
References
1
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.