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SambVca 2. A Web Tool for Analyzing Catalytic Pockets with Topographic Steric Maps

Open access
Falivene, Laura, Credendino, Raffaele, Poater, Albert, Petta, Andrea, Serra, Luigi, Oliva, Romina, Scarano, Vittorio, Cavallo, Luigi·2016·Organometallics

Abstract

Abstract Developing more efficient catalysts remains one of the primary targets of organometallic chemists. To accelerate reaching this goal, effective molecular descriptors and visualization tools can represent a remarkable aid. Here, we present a Web application for analyzing the catalytic pocket of metal complexes using topographic steric maps as a general and unbiased descriptor that is suitable for every class of catalysts. To show the broad applicability of our approach, we first compared the steric map of a series of transition metal complexes presenting popular mono-, di-, and tetracoordinated ligands and three classic zirconocenes. This comparative analysis highlighted similarities and differences between totally unrelated ligands. Then, we focused on a recently developed Fe(II) catalyst that is active in the asymmetric transfer hydrogenation of ketones and imines. Finally, we expand the scope of these tools to rationalize the inversion of enantioselectivity in enzymatic catalysis, achieved by point mutation of three amino acids of mononuclear p-hydroxymandelate synthase.

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Metadata

Authors
Falivene, L., Credendino, R., Poater, A., Petta, A., Serra, L., Oliva, R., Scarano, V., & Cavallo, L.
Venue
Organometallics
Published
2016-06-27
Volume
35
Issue
13
Pages
2286-2293
ISSN
  • 0276-7333 (ISSN-L)
  • 1520-6041
OpenAlex
W2467400748
Cited by
907
References
48
FWCI
34.14
Type
journal article
Language
en
Open access
hybrid

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CoChat. (2026). Citation check: SambVca 2. A Web Tool for Analyzing Catalytic Pockets with Topographic Steric Maps. https://app.cochat.ai/papers/10.1021/acs.organomet.6b00371
The paper
Falivene, L., Credendino, R., Poater, A., Petta, A., Serra, L., Oliva, R., Scarano, V., & Cavallo, L. (2016). SambVca 2. A Web Tool for Analyzing Catalytic Pockets with Topographic Steric Maps. Organometallics. https://doi.org/10.1021/acs.organomet.6b00371

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