Cited by 78Plant biochemistry and biosynthesisSesquiterpenes and Asteraceae StudiesMicrobial Natural Products and Biosynthesis

Cyclization mechanism of amorpha-4,11-diene synthase, a key enzyme in artemisinin biosynthesis

Kim, Soon-Hee, Heo, Keon, Chang, Yung-Jin, Park, Si-Hyung, Rhee, Sang-Ki, Kim, Soo-Un·2006·Journal of Natural Products

Abstract

Cyclization of farnesyl diphosphate into amorpha-4,11-diene by amorpha-4,11-diene synthase (ADS) initiates biosynthesis of artemisinin, a clinically important antimalarial drug precursor. Three possible ring-closure mechanisms, two involving a bisabolyl carbocation intermediate followed by either a 1,3-hydride shift or two successive 1,2-shifts, and one involving a germacrenyl carbocation, were proposed and tested by analyzing the fate of farnesyl diphosphate H-1 hydrogen atoms through (1)H and (2)H NMR spectroscopy. Migration of one deuterium atom of [1,1-(2)H(2)]farnesyl diphosphate to H-10 of amorpha-4,11-diene singled out the bisabolyl carbocation mechanism with a 1,3-hydride shift. Further confirmation was obtained through enzyme reactions with (1R)- and (1S)-[1-(2)H]farnesyl diphosphate. Results showed that deuterium of the 1R compound remained at H-6, whereas that of the 1S compound migrated to H-10 of amorpha-4,11-diene. Incorporation of one deuterium into amorphadiene in the cyclization process was observed when the reaction was performed in (2)H(2)O, as evidenced by an increase of 1 amu in the mass of the molecular ion.

Integrity signals

Registry

Crossref · 10.1021/np050356u

Cites

14 of 14 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Kim, S.-H., Heo, K., Chang, Y.-J., Park, S.-H., Rhee, S.-K., & Kim, S.-U.
Affiliations
Mokpo National University (KR)
Venue
Journal of Natural Products
Published
2006-01-31
Volume
69
Issue
5
Pages
758-762
ISSN
  • 0163-3864 (ISSN-L)
  • 1520-6025
OpenAlex
W2068460381
Cited by
78
References
14
Citations by year
2026: 1 · 2025: 2 · 2024: 10 · 2023: 1 · 2022: 3 · 2021: 5 · 2020: 2 · 2019: 4 · 2018: 4 · 2017: 9 · 2016: 8 · 2015: 2 · 2014: 1 · 2013: 1 · 2012: 2
FWCI
1.08
Type
journal article
Language
en
Open access
closed
Locations
  • Journal of Natural Products (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant biochemistry and biosynthesis
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Sesquiterpenes and Asteraceae Studies
  • Health Sciences › Medicine › Pharmacology › Microbial Natural Products and Biosynthesis
Keywords
amorpha-4,11-diene synthase, artemisinin biosynthesis, ring closure mechanism, 1,3-hydride shift, deuterium labeling, stereochemistry
MeSH terms
Cyclization, Deuterium, Plants, Medicinal, Polyisoprenyl Phosphates, Sesquiterpenes, Stereoisomerism, Molecular Structure, Artemisia, Alkyl and Aryl Transferases, Nuclear Magnetic Resonance, Biomolecular, Artemisinins

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review